MD13G1178100.v1.1

peptide-methionine (R)-S-oxide reductase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0000298
Physical Location & Seq
Reverse (-)
14851480 .. 14853994
2515 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1178100.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGCCGAGAGGAAGGAAAGGGAAAAACCCTACGAATCCAAACAAAAGAGCAGCAGCAGCAGCAGATACACCACAGCAGCCGACGACCAACAACCACCACCAACAACGACGGCAATGGCAGCCGCCCAGACTTCCCTCCAAATTTCAACTCCTCCAGCGGTCTATAGTCATGGACATCCTCTCAAGGCTCCCCATCAAAACCCTCTTCGACTGCAGGTGTGTTTGCAAATCCTGGCTTACTCTAATTTCCGACCCTCAATTTTCCCTTCTCTGCACTTCACGATCCCCCATTGGCATACTGATCAAGACTTTTCCCCCCAAAAGCATAACAAGGAGGCTCGATTTTACCCAGATTGAGGAATCATCTGGTTCTCGCTTTCGCTACGAAAAACTGAGGTTTACCCCCAAATTTAGCCTGCCCATTTCTGAATTTAATCTGATAAACTCCTGCAATGGTTTAGTTTGCTTGTCCGGACCCGAAAGAGGGGACCTTTTGTATGTCTGCAATCCAATTTTGGGTGAGTTCATCACCGTGCCGCGGAGCGATAGGGCTAGGCCTAATTTTACCTCTGTTGGACTTGGATTTAGTGTTGGGACTAATGAGTATAAGGTGTTGCAAACGTTTGTTCCGTTGAGTGAACCGATCAGCAATGATAGATGCAGCTATGAGGCTGAGATATACACCATTGGTACGGGGGTTTGGAGAAGCATTGGAAGTGCTTCTGGGAGCCTTGGTTGTCAGTTGCCCTTCAATGCTTATCTTCATGGAGCTCTGCATTGGGTTTCTCGCGGTAGCGATGTTTCTGAGCTTATAAATTCCTTCAACTTTGAACGGGAACAGTTTCAGGCAGTTGCCCCACCTAGCTACTTTGGACCGCTGGAGAAGCAATTTTCAGACTGTTTGAAGTTGGGAGTGTTGGAAGGTTGTCTCGTTTTGTGTGTGTTTGGGGACGATTCTAGTAAATTTGTTATGTGGGTTATGAAGGAGTATGGTGTCCGAGAGACTTGGACTAAAACTCTTGTTATCGAAAACTTGTATCCGAGAGAACTTAGTTGCGATTTGTATGAACCCATGGTGTTTTTGAGAAATGGGGAAATTGTAATGTCTTACAATGATTGGGCTGTGGTTTGCTATAACCAGAAAAGGACGAGTCTCAGAGAAACTAGAATTACTCAGACCCGAAATCAGTTTCATGCAATTGGTTACAGTCCCTGCTTTGTTTCACTCTATAATGTTTCAAGGGCAGAGGAGGTGAAAAGGGTACAAGGCTGTAGGAAACGTGACAATCTTCCTGCTGAAGAGAGTTCTGATCTCCCTCGTGAAGGGAGTTATGATTCTGCCTCGGAGATGCAACACCACAAGTCTACAAAACTTAACTCGGGCCGTGACTGGCCTTCTTTCGAAGCAAGTCTTCCAACAACCACGAATTCGTCTGCGAACCCGGATTTCATTTGGAGGGCAGGGGCTCCGTGTTCTCTATGCAATGAGCACTTGGGTTATGTTTTCAGCGGTAATGGGTTCCCGATGTGTCTACGATGCTCCAGCACTGGTTCCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SelR

Protein Analysis

520

Amino Acids

58.54

Weight (kDa)

8.74

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 54 - 87 7e-07 F-box domain
F-box-like PF12937 55 - 86 3.2e-06 F-box-like
FBA_3 PF08268 138 - 396 3.6e-22 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 140 - 288 9.2e-07 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 143 - 389 1.3e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000298)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29150 FvH4_1g29150 FvH4_2g35201 FvH4_3g36371 FvH4_4g12590 FvH4_4g12590 FvH4_4g13903 FvH4_4g16630 FvH4_4g16630 FvH4_4g16640 FvH4_4g16640 FvH4_4g16640
malus_domestica MD03G1174100.v1.1 MD13G1177900.v1.1 MD13G1178000.v1.1 MD13G1178100.v1.1
prunus_persica Prupe.1G146800_v2.0.a1 Prupe.1G146900_v2.0.a1 Prupe.1G147000_v2.0.a1 Prupe.1G147100_v2.0.a1 Prupe.1G147200_v2.0.a1 Prupe.1G185600_v2.0.a1 Prupe.1G529300_v2.0.a1 Prupe.6G154200_v2.0.a1 Prupe.6G217100_v2.0.a1
pyrus_communis pycom03g13170 pycom03g13180 pycom05g29500 pycom13g15350 pycom13g15380 pycom13g15390 pycom13g15400
rosa_chinensis RchiOBHm_Chr4g0395601 RchiOBHm_Chr4g0395611 RchiOBHm_Chr4g0395621 RchiOBHm_Chr4g0413281 RchiOBHm_Chr4g0419621 RchiOBHm_Chr4g0419631 RchiOBHm_Chr4g0419901 RchiOBHm_Chr4g0419911 RchiOBHm_Chr4g0419981 RchiOBHm_Chr4g0420081 RchiOBHm_Chr4g0420091 RchiOBHm_Chr6g0306731
rosa_laevigata RLG00000006686 RLG00000007789 RLG00000007793 RLG00000007794 RLG00000007808 RLG00000007809 RLG00000011318
rosa_multiflora Rmu_co8471007.1_g000001 Rmu_sc0000717.1_g000001 Rmu_sc0003141.1_g000001 Rmu_sc0006133.1_g000013 Rmu_sc0013209.1_g000001 Rmu_sc0013209.1_g000002 Rmu_sc0017785.1_g000004 Rmu_sc0017786.1_g000003 Rmu_sc0023895.1_g000004 Rmu_sc0032897.1_g000004
rosa_roxburghii Rroxscaffold_5G00339000 Rroxscaffold_5G00357390 Rroxscaffold_5G00362460 Rroxscaffold_5G00362470 Rroxscaffold_5G00362730 Rroxscaffold_5G00362740 Rroxscaffold_5G00362800
rosa_rugosa Rorug04G0158700 Rorug04G0158800 Rorug04G0158800 Rorug04G0158900 Rorug04G0159000 Rorug04G0159100 Rorug04G0159200 Rorug04G0159300 Rorug04G0161200 Rorug04G0161300 Rorug04G0161300 Rorug04G0161400 Rorug04G0162000 Rorug04G0162100
rosa_samantha Rh1BG049900 Rh4AG179100 Rh4AG179200 Rh4AG220700 Rh4AG222300 Rh4AG222400 Rh4AG222700 Rh4AG222900 Rh4BG222400 Rh4BG222600 Rh4BG224700 Rh4BG224800 Rh4BG225300 Rh4BG225400 Rh4BG338700 Rh4BG338800 Rh4CG235500 Rh4DG174300 Rh4DG219400 Rh4DG219600 Rh4DG221300 Rh4DG221400 Rh4DG221700 Rh5CG465500 Rh5DG455700 Rh6BG417700 Rh6BG436500 Rh6BG436600 Rh6CG478500 Rh6CG478600 Rh6DG465600 Rh6DG465700 Rh6DG492000
rosa_wichuraiana Rw4G018980 Rw4G019160 Rw4G019170 Rw4G019190 Rw4G028680 Rw5G040160 Rw6G040460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 812
AarI CACCTGC 1 cut(s) 204
Acc36I ACCTGC 1 cut(s) 204
AccI GTMKAC 2 cut(s) 1364, 1531
AccII CGCG 2 cut(s) 538, 789
AccIII TCCGGA 1 cut(s) 470
AciI CCGC 7 cut(s) 122, 157, 536, 538, 789, 875, 1509
AclI AACGTT 1 cut(s) 620
AclWI GGATC 1 cut(s) 276
AcsI RAATTY 6 cut(s) 140, 407, 428, 814, 962, 1426
AcuI CTGAAG 1 cut(s) 1317
AfaI GTAC 2 cut(s) 691, 1263
AfiI CCNNNNNNNGG 6 cut(s) 355, 482, 483, 515, 537, 1322
AgsI TTSAA 6 cut(s) 146, 751, 823, 830, 904, 1239
AjnI CCWGG 1 cut(s) 230
AluBI AGCT 4 cut(s) 663, 770, 808, 864
AluI AGCT 4 cut(s) 663, 770, 808, 864
Alw21I GWGCWC 2 cut(s) 772, 1491
Alw26I GTCTC 3 cut(s) 932, 995, 1157
AlwI GGATC 1 cut(s) 276
AlwNI CAGNNNCTG 1 cut(s) 1212
Ama87I CYCGRG 1 cut(s) 1378
Aor13HI TCCGGA 1 cut(s) 470
AoxI GGCC 3 cut(s) 554, 1381, 1391
ApeKI GCWGC 7 cut(s) 50, 53, 56, 59, 76, 118, 660
ApoI RAATTY 6 cut(s) 140, 407, 428, 814, 962, 1426
Asp700I GAANNNNTTC 2 cut(s) 718, 840
AspS9I GGNCC 4 cut(s) 473, 487, 872, 1381
AsuC2I CCSGG 1 cut(s) 1442
AsuHPI GGTGA 3 cut(s) 520, 530, 1264
AsuII TTCGAA 1 cut(s) 1401
AvaI CYCGRG 1 cut(s) 1378
AvaII GGWCC 3 cut(s) 473, 487, 872
BaeI ACNNNNGTAYC 2 cut(s) 681, 714
BanII GRGCYC 2 cut(s) 772, 1468
BauI CACGAG 1 cut(s) 1317
BbsI GAAGAC 1 cut(s) 1403
Bbv12I GWGCWC 2 cut(s) 772, 1491
BbvI GCAGC 7 cut(s) 62, 65, 68, 71, 88, 130, 672
BccI CCATC 1 cut(s) 200
BceAI ACGGC 2 cut(s) 125, 1368
BciT130I CCWGG 1 cut(s) 232
BciVI GTATCC 1 cut(s) 1047
BclI TGATCA 1 cut(s) 300
BcnI CCSGG 1 cut(s) 1442
BcoDI GTCTC 3 cut(s) 932, 995, 1157
BfaI CTAG 4 cut(s) 552, 861, 957, 1164
BfmI CTRYAG 3 cut(s) 162, 211, 1270
BfuAI ACCTGC 1 cut(s) 204
BfuI GTATCC 1 cut(s) 1047
BisI GCNGC 9 cut(s) 51, 54, 57, 60, 77, 119, 122, 536, 661
BlsI GCNGC 9 cut(s) 52, 55, 58, 61, 78, 120, 123, 537, 662
Bme1390I CCNGG 2 cut(s) 232, 1442
Bme18I GGWCC 3 cut(s) 473, 487, 872
BmeT110I CYCGRG 1 cut(s) 1378
BmgT120I GGNCC 4 cut(s) 473, 487, 872, 1381
BmiI GGNNCC 7 cut(s) 188, 475, 488, 728, 1467, 1520, 1552
BmrFI CCNGG 2 cut(s) 232, 1442
BmsI GCATC 3 cut(s) 647, 1338, 1526
BpiI GAAGAC 1 cut(s) 1403
BpmI CTGGAG 3 cut(s) 137, 899, 1525
Bpu14I TTCGAA 1 cut(s) 1401
BpuEI CTTGAG 1 cut(s) 166
BpuMI CCSGG 1 cut(s) 1442
BsaJI CCNNGG 4 cut(s) 536, 730, 1071, 1341
BsaWI WCCGGW 1 cut(s) 470
BsaXI ACNNNNNCTCC 2 cut(s) 718, 748
Bsc4I CCNNNNNNNGG 6 cut(s) 355, 482, 483, 515, 537, 1322
Bse1I ACTGG 2 cut(s) 1394, 1552
Bse3DI GCAATG 4 cut(s) 119, 457, 655, 1489
BseAI TCCGGA 1 cut(s) 470
BseBI CCWGG 1 cut(s) 232
BseDI CCNNGG 4 cut(s) 536, 730, 1071, 1341
BseGI GGATG 1 cut(s) 174
BseLI CCNNNNNNNGG 6 cut(s) 355, 482, 483, 515, 537, 1322
BseMI GCAATG 4 cut(s) 119, 457, 655, 1489
BseMII CTCAG 5 cut(s) 383, 663, 795, 1168, 1187
BseNI ACTGG 2 cut(s) 1394, 1552
BseRI GAGGAG 2 cut(s) 140, 1262
BseXI GCAGC 7 cut(s) 62, 65, 68, 71, 88, 130, 672
BsgI GTGCAG 1 cut(s) 256
Bsh1236I CGCG 2 cut(s) 538, 789
BshFI GGCC 3 cut(s) 556, 1383, 1393
BsiHKAI GWGCWC 2 cut(s) 772, 1491
BsiHKCI CYCGRG 1 cut(s) 1378
BsiSI CCGG 2 cut(s) 471, 1442
BslFI GGGAC 4 cut(s) 500, 607, 962, 1194
BslI CCNNNNNNNGG 6 cut(s) 355, 482, 483, 515, 537, 1322
BsmAI GTCTC 3 cut(s) 932, 995, 1157
BsmFI GGGAC 4 cut(s) 500, 607, 962, 1194
BsnI GGCC 3 cut(s) 556, 1383, 1393
BsoBI CYCGRG 1 cut(s) 1378
Bsp119I TTCGAA 1 cut(s) 1401
Bsp1286I GDGCHC 3 cut(s) 772, 1468, 1491
Bsp13I TCCGGA 1 cut(s) 470
Bsp143I GATC 4 cut(s) 281, 300, 642, 1309
Bsp19I CCATGG 1 cut(s) 1071
BspACI CCGC 7 cut(s) 122, 157, 536, 538, 789, 875, 1509
BspANI GGCC 3 cut(s) 556, 1383, 1393
BspCNI CTCAG 5 cut(s) 384, 664, 796, 1167, 1186
BspEI TCCGGA 1 cut(s) 470
BspFNI CGCG 2 cut(s) 538, 789
BspLI GGNNCC 7 cut(s) 188, 475, 488, 728, 1467, 1520, 1552
BspMAI CTGCAG 1 cut(s) 215
BspMI ACCTGC 1 cut(s) 204
BspPI GGATC 1 cut(s) 276
BspT104I TTCGAA 1 cut(s) 1401
BsrDI GCAATG 4 cut(s) 119, 457, 655, 1489
BsrI ACTGG 2 cut(s) 1394, 1552
BssECI CCNNGG 4 cut(s) 536, 730, 1071, 1341
BssMI GATC 4 cut(s) 281, 300, 642, 1309
BssSI CACGAG 1 cut(s) 1317
BssT1I CCWWGG 2 cut(s) 730, 1071
Bst2BI CACGAG 1 cut(s) 1317
Bst2UI CCWGG 1 cut(s) 232
Bst4CI ACNGT 4 cut(s) 532, 840, 899, 1208
Bst6I CTCTTC 2 cut(s) 209, 1293
BstBI TTCGAA 1 cut(s) 1401
BstC8I GCNNGC 1 cut(s) 416
BstDEI CTNAG 6 cut(s) 392, 672, 804, 1049, 1154, 1173
BstDSI CCRYGG 2 cut(s) 536, 1071
BstENI CCTNNNNNAGG 1 cut(s) 1320
BstF5I GGATG 1 cut(s) 174
BstFNI CGCG 2 cut(s) 538, 789
BstKTI GATC 4 cut(s) 284, 303, 645, 1312
BstMAI GTCTC 3 cut(s) 932, 995, 1157
BstMBI GATC 4 cut(s) 281, 300, 642, 1309
BstMWI GCNNNNNNNGC 4 cut(s) 56, 59, 118, 883
BstNI CCWGG 1 cut(s) 232
BstSCI CCNGG 2 cut(s) 230, 1440
BstSFI CTRYAG 3 cut(s) 162, 211, 1270
BstUI CGCG 2 cut(s) 538, 789
BstV1I GCAGC 7 cut(s) 62, 65, 68, 71, 88, 130, 672
BstV2I GAAGAC 1 cut(s) 1403
BsuI GTATCC 1 cut(s) 1047
BsuRI GGCC 3 cut(s) 556, 1383, 1393
BtgI CCRYGG 2 cut(s) 536, 1071
BtgZI GCGATG 1 cut(s) 810
BtsCI GGATG 1 cut(s) 174
BtsIMutI CAGTG 1 cut(s) 1545
BveI ACCTGC 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 416
CaiI CAGNNNCTG 1 cut(s) 1212
Cfr13I GGNCC 4 cut(s) 473, 487, 872, 1381
Cfr42I CCGCGG 1 cut(s) 539
Csp6I GTAC 2 cut(s) 690, 1262
CviAII CATG 4 cut(s) 169, 764, 1072, 1193
CviQI GTAC 2 cut(s) 690, 1262
DdeI CTNAG 6 cut(s) 392, 672, 804, 1049, 1154, 1173
DpnI GATC 4 cut(s) 283, 302, 644, 1311
DpnII GATC 4 cut(s) 281, 300, 642, 1309
Eam1104I CTCTTC 2 cut(s) 209, 1293
EarI CTCTTC 2 cut(s) 209, 1293
Ecl136II GAGCTC 1 cut(s) 770
Eco130I CCWWGG 2 cut(s) 730, 1071
Eco147I AGGCCT 1 cut(s) 556
Eco24I GRGCYC 2 cut(s) 772, 1468
Eco47I GGWCC 3 cut(s) 473, 487, 872
Eco53kI GAGCTC 1 cut(s) 770
Eco57I CTGAAG 1 cut(s) 1317
Eco88I CYCGRG 1 cut(s) 1378
EcoICRI GAGCTC 1 cut(s) 770
EcoNI CCTNNNNNAGG 1 cut(s) 1320
EcoO109I RGGNCCY 1 cut(s) 487
EcoRI GAATTC 1 cut(s) 1426
EcoRII CCWGG 1 cut(s) 230
EcoT14I CCWWGG 2 cut(s) 730, 1071
EcoT38I GRGCYC 2 cut(s) 772, 1468
ErhI CCWWGG 2 cut(s) 730, 1071
FaeI CATG 4 cut(s) 172, 767, 1075, 1196
FalI AAGNNNNNCTT 2 cut(s) 1395, 1427
FaqI GGGAC 4 cut(s) 500, 607, 962, 1194
FatI CATG 4 cut(s) 168, 763, 1071, 1192
FbaI TGATCA 1 cut(s) 300
FblI GTMKAC 2 cut(s) 1364, 1531
Fnu4HI GCNGC 9 cut(s) 51, 54, 57, 60, 77, 119, 122, 536, 661
FokI GGATG 1 cut(s) 161
FriOI GRGCYC 2 cut(s) 772, 1468
Fsp4HI GCNGC 9 cut(s) 51, 54, 57, 60, 77, 119, 122, 536, 661
FspBI CTAG 4 cut(s) 552, 861, 957, 1164
GluI GCNGC 9 cut(s) 51, 54, 57, 60, 77, 119, 122, 536, 661
GsuI CTGGAG 3 cut(s) 137, 899, 1525
HaeIII GGCC 3 cut(s) 556, 1383, 1393
HapII CCGG 2 cut(s) 471, 1442
Hin1II CATG 4 cut(s) 172, 767, 1075, 1196
HinfI GANTC 5 cut(s) 34, 359, 953, 1150, 1334
HpaII CCGG 2 cut(s) 471, 1442
HphI GGTGA 3 cut(s) 520, 530, 1264
Hpy166II GTNNAC 4 cut(s) 399, 638, 1365, 1532
Hpy188III TCNNGA 6 cut(s) 279, 304, 471, 1319, 1522, 1557
Hpy8I GTNNAC 4 cut(s) 399, 638, 1365, 1532
Hpy99I CGWCG 2 cut(s) 85, 111
HpyAV CCTTC 8 cut(s) 6, 275, 757, 829, 914, 976, 1316, 1404
HpyCH4III ACNGT 4 cut(s) 532, 840, 899, 1208
HpyCH4IV ACGT 2 cut(s) 620, 1279
HpyF10VI GCNNNNNNNGC 4 cut(s) 56, 59, 118, 883
HpyF3I CTNAG 6 cut(s) 392, 672, 804, 1049, 1154, 1173
HpySE526I ACGT 2 cut(s) 620, 1279
Hsp92II CATG 4 cut(s) 172, 767, 1075, 1196
Kpn2I TCCGGA 1 cut(s) 470
Ksp22I TGATCA 1 cut(s) 300
KspI CCGCGG 1 cut(s) 539
Kzo9I GATC 4 cut(s) 281, 300, 642, 1309
LmnI GCTCC 6 cut(s) 192, 540, 726, 767, 1471, 1544
Lsp1109I GCAGC 7 cut(s) 62, 65, 68, 71, 88, 130, 672
LweI GCATC 3 cut(s) 647, 1338, 1526
MaeI CTAG 4 cut(s) 552, 861, 957, 1164
MaeII ACGT 2 cut(s) 620, 1279
MaeIII GTNAC 3 cut(s) 1202, 1280, 1385
MalI GATC 4 cut(s) 283, 302, 644, 1311
MboI GATC 4 cut(s) 281, 300, 642, 1309
MboII GAAGA 5 cut(s) 196, 752, 1280, 1310, 1403
MfeI CAATTG 1 cut(s) 1197
MhlI GDGCHC 3 cut(s) 772, 1468, 1491
MlyI GAGTC 1 cut(s) 1159
MmeI TCCRAC 4 cut(s) 273, 553, 897, 1439
MroI TCCGGA 1 cut(s) 470
MroXI GAANNNNTTC 2 cut(s) 718, 840
MseI TTAA 2 cut(s) 432, 1374
MslI CAYNNNNRTG 1 cut(s) 530
MspA1I CMGCKG 4 cut(s) 157, 538, 877, 1509
MspI CCGG 2 cut(s) 471, 1442
MspR9I CCNGG 2 cut(s) 232, 1442
MunI CAATTG 1 cut(s) 1197
MvaI CCWGG 1 cut(s) 232
MvnI CGCG 2 cut(s) 538, 789
MwoI GCNNNNNNNGC 4 cut(s) 56, 59, 118, 883
NciI CCSGG 1 cut(s) 1442
NcoI CCATGG 1 cut(s) 1071
NdeII GATC 4 cut(s) 281, 300, 642, 1309
NlaIII CATG 4 cut(s) 172, 767, 1075, 1196
NlaIV GGNNCC 7 cut(s) 188, 475, 488, 728, 1467, 1520, 1552
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 2 cut(s) 1280, 1385
NspV TTCGAA 1 cut(s) 1401
PaqCI CACCTGC 1 cut(s) 204
PceI AGGCCT 1 cut(s) 556
PcsI WCGNNNNNNNCGW 1 cut(s) 626
PdmI GAANNNNTTC 2 cut(s) 718, 840
PfeI GAWTC 4 cut(s) 34, 359, 953, 1334
PkrI GCNGC 9 cut(s) 52, 55, 58, 61, 78, 120, 123, 537, 662
PleI GAGTC 1 cut(s) 1158
PpsI GAGTC 1 cut(s) 1158
PpuMI RGGWCCY 1 cut(s) 487
PsiI TTATAA 1 cut(s) 812
Psp124BI GAGCTC 1 cut(s) 772
Psp1406I AACGTT 1 cut(s) 620
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 1 cut(s) 230
PspGI CCWGG 1 cut(s) 230
PspN4I GGNNCC 7 cut(s) 188, 475, 488, 728, 1467, 1520, 1552
PspPI GGNCC 4 cut(s) 473, 487, 872, 1381
PspPPI RGGWCCY 1 cut(s) 487
PstI CTGCAG 1 cut(s) 215
PstNI CAGNNNCTG 1 cut(s) 1212
RsaI GTAC 2 cut(s) 691, 1263
RsaNI GTAC 2 cut(s) 690, 1262
RseI CAYNNNNRTG 1 cut(s) 530
SacI GAGCTC 1 cut(s) 772
SacII CCGCGG 1 cut(s) 539
SaqAI TTAA 2 cut(s) 432, 1374
SatI GCNGC 9 cut(s) 51, 54, 57, 60, 77, 119, 122, 536, 661
Sau3AI GATC 4 cut(s) 281, 300, 642, 1309
Sau96I GGNCC 4 cut(s) 473, 487, 872, 1381
SchI GAGTC 1 cut(s) 1159
ScrFI CCNGG 2 cut(s) 232, 1442
SduI GDGCHC 3 cut(s) 772, 1468, 1491
SfaNI GCATC 3 cut(s) 647, 1338, 1526
SfcI CTRYAG 3 cut(s) 162, 211, 1270
Sfr303I CCGCGG 1 cut(s) 539
SfuI TTCGAA 1 cut(s) 1401
SgrBI CCGCGG 1 cut(s) 539
SinI GGWCC 3 cut(s) 473, 487, 872
SmiMI CAYNNNNRTG 1 cut(s) 530
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
SseBI AGGCCT 1 cut(s) 556
SsiI CCGC 7 cut(s) 122, 157, 536, 538, 789, 875, 1509
SspMI CTAG 4 cut(s) 552, 861, 957, 1164
SstI GAGCTC 1 cut(s) 772
StuI AGGCCT 1 cut(s) 556
StyD4I CCNGG 2 cut(s) 230, 1440
StyI CCWWGG 2 cut(s) 730, 1071
TaaI ACNGT 4 cut(s) 532, 840, 899, 1208
TaiI ACGT 2 cut(s) 623, 1282
TaqI TCGA 4 cut(s) 207, 339, 1026, 1401
TauI GCSGC 2 cut(s) 124, 538
TfiI GAWTC 4 cut(s) 34, 359, 953, 1334
Tru1I TTAA 2 cut(s) 432, 1374
Tru9I TTAA 2 cut(s) 432, 1374
TscAI CASTG 1 cut(s) 1552
TseFI GTSAC 2 cut(s) 1280, 1385
TseI GCWGC 7 cut(s) 50, 53, 56, 59, 76, 118, 660
Tsp45I GTSAC 2 cut(s) 1280, 1385
TspDTI ATGAA 6 cut(s) 514, 752, 995, 1080, 1181, 1438
TspGWI ACGGA 2 cut(s) 618, 1458
TspRI CASTG 1 cut(s) 1552
VpaK11BI GGWCC 3 cut(s) 473, 487, 872
XagI CCTNNNNNAGG 1 cut(s) 1320
XapI RAATTY 6 cut(s) 140, 407, 428, 814, 962, 1426
XmiI GTMKAC 2 cut(s) 1364, 1531
XmnI GAANNNNTTC 2 cut(s) 718, 840
XspI CTAG 4 cut(s) 552, 861, 957, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.