Rorug04G0162100

peptide-methionine (R)-S-oxide reductase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000298
Physical Location & Seq
Reverse (-)
28222940 .. 28225618
2679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0162100.1

Sequence Viewer

Length: 1989 bp
ATGGCCCTTGTGGTGCTCCCCATCCTTGGCTTCCTTAGCGTTAGGGTTGAAGCTCAAGCACCAACTTACCGGTATCATATCTGTTCAAACACAACCAGTTTCACTGCCAACAGCACCTACCAGTCTAATCTTAATCTTCTCCTCTCTTCTCTCACATCCAACGCCACACGTGATATTGGATTCTACTACACCACAGCGGGCGTGCAAAACTCCATTTCAGAAGTAGTTTACGGTTCTTTCCTATGCCGTGGAGATCTCACCCCTGACTTGTGCCAAGAATGTGTTACTACTATAGCCAAAGATGGTGTCCAAAAGTACTGCCCCTTGGAAAAAATTTCAATAATATGGTACGATGAGTGCATGTTGCGCTACACAAATCAGTCTTTCTTGAACAGGTTGGATAAAGATCCTCAAATTTCCATGGTGAACATTTGGAATGTCACTGACCCTACCCGCTTTACGCAGCTGCTAGCAGAAACAATCAATGGCTTGGTGGCTCTGGCTTCAAATGCACCATCTGGTGCTAAAAAGTATGCAACGAAAGAAGCACCTTTCACAGGGTTTCAGCAGTTGTACAGCCTTGTTCAGTGCACACCAGACATATCAAGCACAAGTTGTGATACATGTCTTCGAGAAGCTATTGCGCAACTTTCAGGTTGTTGTACTGGAAAGGAAGGTGCTAGAATTTTATCTCCTAGTTGTAATGTTCGATATGGAGTTTATCCATTTTATACAACTGAAGCAGTCACACCTTCACCCCTCCCACAACCTCCGACTCTTCCTCCCCCACCTCCAGGAAAAGACCAAATCTCATCCTTAATCATAGTGGCCATTGTTGTTCCAATTGCCATAGTGCTTTTCTTGGTAGGCTGCTTTTTTCTACGAAGAAAGGCAAGAAAAAAGTGTAATGCTTTACAAGAACAAAATGTGGGGAATAAAATTTCTACTGTGAAGTCATTGCAATTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAATAACAGATTAGGGGAAGGTGGCTTTGGAGTGGTTTACAAGGGAACCCTTCCTAATGGGCGAGAAATAGCTGTGAAGAGGTTATCCAGAAGCTCCGGGCAAGGTGTCAAGGAGTTTCAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTGAGGCTACTGGGATTTTGCTCTGAAGGAGAAGAAAAGATACTTATCTATGAACTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTCAACCCGGATATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATAGATAGGATTGCTAGAGGGATTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGCGATCTCAAAGCAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAGAACTAGAAGGATTGTCGGAACTTATGGTTACATGTCTCCAGAGTATGTAATGCATGGACAGTTCTCAGAGAAGTCTGATGTGTATAGTCTTGGTGTCTTAATCTTAGAGATTATAACAGGCAAGAAAAACACTAAATTGTATCAATCAGACCGCGGCGAAGATCTCTTAACCTATGCTGCTTGGAAACATTGGAGAGATGGGACGGCGGAAGAATTGTTGGATTCAAATCTGAGATGTTCTTATTCAAGAAATGAAGTAATCAAATGTATCTATATTGGTTTACTGTGTGTTCAGGAAGATCCAAAGGAGAGACCTACCATGCAAACCGTATTTCTCATGCTAAGCAGATACTCATTTACTATGCCATTGCCTCAAAAGCCAGCGTTTTTCCTGTATGGTAAAGCAGAATCGAACATGCCATCAGTAGCCACTGGATCATCATATCAACCCACTAGCAGCTCAGTCTCATGTTCTGTTAATGAAGCTTCAATTACTGAATTATTCCCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SelR

Protein Analysis

662

Amino Acids

73.87

Weight (kDa)

8.61

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 28 - 127 2.6e-24 Salt stress response/antifungal
Stress-antifung PF01657 148 - 239 2.8e-11 Salt stress response/antifungal
Pkinase PF00069 335 - 602 7.2e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 336 - 602 3.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000298)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29150 FvH4_1g29150 FvH4_2g35201 FvH4_3g36371 FvH4_4g12590 FvH4_4g12590 FvH4_4g13903 FvH4_4g16630 FvH4_4g16630 FvH4_4g16640 FvH4_4g16640 FvH4_4g16640
malus_domestica MD03G1174100.v1.1 MD13G1177900.v1.1 MD13G1178000.v1.1 MD13G1178100.v1.1
prunus_persica Prupe.1G146800_v2.0.a1 Prupe.1G146900_v2.0.a1 Prupe.1G147000_v2.0.a1 Prupe.1G147100_v2.0.a1 Prupe.1G147200_v2.0.a1 Prupe.1G185600_v2.0.a1 Prupe.1G529300_v2.0.a1 Prupe.6G154200_v2.0.a1 Prupe.6G217100_v2.0.a1
pyrus_communis pycom03g13170 pycom03g13180 pycom05g29500 pycom13g15350 pycom13g15380 pycom13g15390 pycom13g15400
rosa_chinensis RchiOBHm_Chr4g0395601 RchiOBHm_Chr4g0395611 RchiOBHm_Chr4g0395621 RchiOBHm_Chr4g0413281 RchiOBHm_Chr4g0419621 RchiOBHm_Chr4g0419631 RchiOBHm_Chr4g0419901 RchiOBHm_Chr4g0419911 RchiOBHm_Chr4g0419981 RchiOBHm_Chr4g0420081 RchiOBHm_Chr4g0420091 RchiOBHm_Chr6g0306731
rosa_laevigata RLG00000006686 RLG00000007789 RLG00000007793 RLG00000007794 RLG00000007808 RLG00000007809 RLG00000011318
rosa_multiflora Rmu_co8471007.1_g000001 Rmu_sc0000717.1_g000001 Rmu_sc0003141.1_g000001 Rmu_sc0006133.1_g000013 Rmu_sc0013209.1_g000001 Rmu_sc0013209.1_g000002 Rmu_sc0017785.1_g000004 Rmu_sc0017786.1_g000003 Rmu_sc0023895.1_g000004 Rmu_sc0032897.1_g000004
rosa_roxburghii Rroxscaffold_5G00339000 Rroxscaffold_5G00357390 Rroxscaffold_5G00362460 Rroxscaffold_5G00362470 Rroxscaffold_5G00362730 Rroxscaffold_5G00362740 Rroxscaffold_5G00362800
rosa_rugosa Rorug04G0158700 Rorug04G0158800 Rorug04G0158800 Rorug04G0158900 Rorug04G0159000 Rorug04G0159100 Rorug04G0159200 Rorug04G0159300 Rorug04G0161200 Rorug04G0161300 Rorug04G0161300 Rorug04G0161400 Rorug04G0162000 Rorug04G0162100
rosa_samantha Rh1BG049900 Rh4AG179100 Rh4AG179200 Rh4AG220700 Rh4AG222300 Rh4AG222400 Rh4AG222700 Rh4AG222900 Rh4BG222400 Rh4BG222600 Rh4BG224700 Rh4BG224800 Rh4BG225300 Rh4BG225400 Rh4BG338700 Rh4BG338800 Rh4CG235500 Rh4DG174300 Rh4DG219400 Rh4DG219600 Rh4DG221300 Rh4DG221400 Rh4DG221700 Rh5CG465500 Rh5DG455700 Rh6BG417700 Rh6BG436500 Rh6BG436600 Rh6CG478500 Rh6CG478600 Rh6DG465600 Rh6DG465700 Rh6DG492000
rosa_wichuraiana Rw4G018980 Rw4G019160 Rw4G019170 Rw4G019190 Rw4G028680 Rw5G040160 Rw6G040460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1589
Acc16I TGCGCA 1 cut(s) 645
AccII CGCG 2 cut(s) 1374, 1629
AciI CCGC 5 cut(s) 197, 454, 1627, 1629, 1682
AclWI GGATC 3 cut(s) 401, 1769, 1918
AcoI YGGCCR 1 cut(s) 828
AcsI RAATTY 5 cut(s) 333, 414, 684, 939, 1165
AcuI CTGAAG 3 cut(s) 759, 1139, 1215
AcvI CACGTG 1 cut(s) 170
AfaI GTAC 4 cut(s) 317, 350, 575, 664
AfiI CCNNNNNNNGG 3 cut(s) 26, 557, 794
AflIII ACRYGT 3 cut(s) 167, 623, 1506
AgeI ACCGGT 1 cut(s) 69
AjnI CCWGG 1 cut(s) 793
AjuI GAANNNNNNNTTGG 2 cut(s) 1017, 1049
AluBI AGCT 8 cut(s) 53, 466, 638, 1079, 1101, 1153, 1935, 1961
AluI AGCT 8 cut(s) 53, 466, 638, 1079, 1101, 1153, 1935, 1961
Alw21I GWGCWC 2 cut(s) 18, 593
Alw26I GTCTC 3 cut(s) 1515, 1780, 1945
Alw44I GTGCAC 1 cut(s) 589
AlwI GGATC 3 cut(s) 401, 1769, 1918
AoxI GGCC 2 cut(s) 3, 828
ApaLI GTGCAC 1 cut(s) 589
ApeKI GCWGC 6 cut(s) 463, 466, 870, 986, 1652, 1932
ApoI RAATTY 5 cut(s) 333, 414, 684, 939, 1165
ArsI GACNNNNNNTTYG 2 cut(s) 291, 323
AsiGI ACCGGT 1 cut(s) 69
AspLEI GCGC 2 cut(s) 369, 646
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 2 cut(s) 1105, 1265
AsuHPI GGTGA 3 cut(s) 250, 436, 747
AsuNHI GCTAGC 1 cut(s) 469
BaeGI GKGCMC 1 cut(s) 593
BalI TGGCCA 1 cut(s) 830
BarI GAAGNNNNNNTAC 2 cut(s) 1194, 1226
BbrPI CACGTG 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 620
Bbv12I GWGCWC 2 cut(s) 18, 593
BbvI GCAGC 6 cut(s) 453, 475, 857, 998, 1639, 1944
BccI CCATC 7 cut(s) 29, 296, 523, 1350, 1397, 1667, 1903
BceAI ACGGC 2 cut(s) 231, 1695
BciT130I CCWGG 1 cut(s) 795
BclI TGATCA 1 cut(s) 1459
BcnI CCSGG 2 cut(s) 1105, 1265
BcoDI GTCTC 3 cut(s) 1515, 1780, 1945
BfaI CTAG 6 cut(s) 470, 681, 696, 1323, 1479, 1929
BfmI CTRYAG 1 cut(s) 291
BglII AGATCT 2 cut(s) 253, 1636
BisI GCNGC 7 cut(s) 464, 467, 871, 987, 1630, 1653, 1933
BlpI GCTNAGC 1 cut(s) 1817
BlsI GCNGC 7 cut(s) 465, 468, 872, 988, 1631, 1654, 1934
BmcAI AGTACT 1 cut(s) 317
Bme1390I CCNGG 3 cut(s) 795, 1105, 1265
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 1054
BmrFI CCNGG 3 cut(s) 795, 1105, 1265
BmrI ACTGGG 1 cut(s) 1190
BmtI GCTAGC 1 cut(s) 473
BmuI ACTGGG 1 cut(s) 1190
BpiI GAAGAC 1 cut(s) 620
BplI GAGNNNNNCTC 2 cut(s) 1317, 1349
BpmI CTGGAG 2 cut(s) 777, 1497
Bpu10I CCTNAGC 1 cut(s) 35
Bpu1102I GCTNAGC 1 cut(s) 1817
BpuEI CTTGAG 2 cut(s) 39, 1452
BpuMI CCSGG 2 cut(s) 1105, 1265
BsaAI YACGTR 1 cut(s) 170
BsaBI GATNNNNATC 3 cut(s) 405, 1214, 1701
BsaI GGTCTC 1 cut(s) 1780
BsaJI CCNNGG 5 cut(s) 25, 247, 324, 420, 1627
BsaWI WCCGGW 1 cut(s) 69
BsaXI ACNNNNNCTCC 2 cut(s) 766, 796
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 557, 794
Bse118I RCCGGY 1 cut(s) 69
Bse1I ACTGG 6 cut(s) 96, 121, 670, 997, 1185, 1912
Bse3DI GCAATG 2 cut(s) 956, 1841
Bse8I GATNNNNATC 3 cut(s) 405, 1214, 1701
BseBI CCWGG 1 cut(s) 795
BseDI CCNNGG 5 cut(s) 25, 247, 324, 420, 1627
BseGI GGATG 3 cut(s) 21, 155, 812
BseJI GATNNNNATC 3 cut(s) 405, 1214, 1701
BseLI CCNNNNNNNGG 3 cut(s) 26, 557, 794
BseMI GCAATG 2 cut(s) 956, 1841
BseMII CTCAG 3 cut(s) 1554, 1697, 1950
BseNI ACTGG 6 cut(s) 96, 121, 670, 997, 1185, 1912
BseRI GAGGAG 1 cut(s) 131
BseSI GKGCMC 1 cut(s) 593
BseXI GCAGC 6 cut(s) 453, 475, 857, 998, 1639, 1944
BsgI GTGCAG 1 cut(s) 1250
Bsh1236I CGCG 2 cut(s) 1374, 1629
BshFI GGCC 2 cut(s) 5, 830
BshTI ACCGGT 1 cut(s) 69
BsiHKAI GWGCWC 2 cut(s) 18, 593
BsiSI CCGG 3 cut(s) 70, 1104, 1265
BslFI GGGAC 1 cut(s) 1690
BslI CCNNNNNNNGG 3 cut(s) 26, 557, 794
BsmAI GTCTC 3 cut(s) 1515, 1780, 1945
BsmFI GGGAC 1 cut(s) 1690
BsnI GGCC 2 cut(s) 5, 830
Bso31I GGTCTC 1 cut(s) 1780
Bsp1286I GDGCHC 2 cut(s) 18, 593
Bsp1407I TGTACA 1 cut(s) 573
Bsp143I GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
Bsp1720I GCTNAGC 1 cut(s) 1817
Bsp19I CCATGG 1 cut(s) 420
Bsp68I TCGCGA 1 cut(s) 1374
BspACI CCGC 5 cut(s) 197, 454, 1627, 1629, 1682
BspANI GGCC 2 cut(s) 5, 830
BspCNI CTCAG 3 cut(s) 1553, 1698, 1949
BspFNI CGCG 2 cut(s) 1374, 1629
BspLI GGNNCC 1 cut(s) 1054
BspOI GCTAGC 1 cut(s) 473
BspPI GGATC 3 cut(s) 401, 1769, 1918
BspTNI GGTCTC 1 cut(s) 1780
BsrDI GCAATG 2 cut(s) 956, 1841
BsrFI RCCGGY 1 cut(s) 69
BsrGI TGTACA 1 cut(s) 573
BsrI ACTGG 6 cut(s) 96, 121, 670, 997, 1185, 1912
BssAI RCCGGY 1 cut(s) 69
BssECI CCNNGG 5 cut(s) 25, 247, 324, 420, 1627
BssMI GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
BssT1I CCWWGG 3 cut(s) 25, 324, 420
Bst2UI CCWGG 1 cut(s) 795
Bst4CI ACNGT 5 cut(s) 233, 949, 1536, 1761, 1804
Bst6I CTCTTC 3 cut(s) 151, 783, 1079
BstAUI TGTACA 1 cut(s) 573
BstBAI YACGTR 1 cut(s) 170
BstC8I GCNNGC 5 cut(s) 199, 203, 471, 1387, 1857
BstDEI CTNAG 6 cut(s) 35, 1540, 1579, 1706, 1817, 1936
BstDSI CCRYGG 3 cut(s) 247, 420, 1627
BstENI CCTNNNNNAGG 1 cut(s) 555
BstF5I GGATG 3 cut(s) 21, 155, 812
BstFNI CGCG 2 cut(s) 1374, 1629
BstHHI GCGC 2 cut(s) 369, 646
BstKTI GATC 7 cut(s) 256, 409, 1378, 1462, 1639, 1777, 1913
BstMAI GTCTC 3 cut(s) 1515, 1780, 1945
BstMBI GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
BstMWI GCNNNNNNNGC 4 cut(s) 36, 366, 509, 1852
BstNI CCWGG 1 cut(s) 795
BstNSI RCATGY 4 cut(s) 364, 627, 1510, 1894
BstSCI CCNGG 3 cut(s) 793, 1103, 1263
BstSFI CTRYAG 1 cut(s) 291
BstSLI GKGCMC 1 cut(s) 593
BstUI CGCG 2 cut(s) 1374, 1629
BstV1I GCAGC 6 cut(s) 453, 475, 857, 998, 1639, 1944
BstV2I GAAGAC 1 cut(s) 620
BstX2I RGATCY 4 cut(s) 253, 406, 1636, 1774
BstYI RGATCY 4 cut(s) 253, 406, 1636, 1774
BsuRI GGCC 2 cut(s) 5, 830
BtgI CCRYGG 3 cut(s) 247, 420, 1627
BtgZI GCGATG 1 cut(s) 1355
BtsCI GGATG 3 cut(s) 21, 155, 812
BtsI GCAGTG 1 cut(s) 102
BtsIMutI CAGTG 4 cut(s) 102, 441, 593, 1905
BtuMI TCGCGA 1 cut(s) 1374
Cac8I GCNNGC 5 cut(s) 199, 203, 471, 1387, 1857
CfoI GCGC 2 cut(s) 369, 646
Cfr10I RCCGGY 1 cut(s) 69
Cfr13I GGNCC 1 cut(s) 4
Cfr42I CCGCGG 1 cut(s) 1630
Csp6I GTAC 4 cut(s) 316, 349, 574, 663
CspAI ACCGGT 1 cut(s) 69
CviAII CATG 9 cut(s) 361, 421, 624, 1507, 1529, 1795, 1813, 1891, 1944
CviQI GTAC 4 cut(s) 316, 349, 574, 663
DdeI CTNAG 6 cut(s) 35, 1540, 1579, 1706, 1817, 1936
DpnI GATC 7 cut(s) 255, 408, 1377, 1461, 1638, 1776, 1912
DpnII GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
EaeI YGGCCR 1 cut(s) 828
Eam1104I CTCTTC 3 cut(s) 151, 783, 1079
EarI CTCTTC 3 cut(s) 151, 783, 1079
EciI GGCGGA 1 cut(s) 1697
Eco130I CCWWGG 3 cut(s) 25, 324, 420
Eco31I GGTCTC 1 cut(s) 1780
Eco57I CTGAAG 3 cut(s) 759, 1139, 1215
Eco72I CACGTG 1 cut(s) 170
EcoNI CCTNNNNNAGG 1 cut(s) 555
EcoRII CCWGG 1 cut(s) 793
EcoT14I CCWWGG 3 cut(s) 25, 324, 420
EcoT22I ATGCAT 1 cut(s) 1530
ErhI CCWWGG 3 cut(s) 25, 324, 420
FaeI CATG 9 cut(s) 364, 424, 627, 1510, 1532, 1798, 1816, 1894, 1947
FaqI GGGAC 1 cut(s) 1690
FatI CATG 9 cut(s) 360, 420, 623, 1506, 1528, 1794, 1812, 1890, 1943
FauI CCCGC 2 cut(s) 190, 461
FbaI TGATCA 1 cut(s) 1459
Fnu4HI GCNGC 7 cut(s) 464, 467, 871, 987, 1630, 1653, 1933
FokI GGATG 3 cut(s) 8, 142, 799
Fsp4HI GCNGC 7 cut(s) 464, 467, 871, 987, 1630, 1653, 1933
FspBI CTAG 6 cut(s) 470, 681, 696, 1323, 1479, 1929
FspI TGCGCA 1 cut(s) 645
GlaI GCGC 2 cut(s) 368, 645
GluI GCNGC 7 cut(s) 464, 467, 871, 987, 1630, 1653, 1933
GsuI CTGGAG 2 cut(s) 777, 1497
HaeIII GGCC 2 cut(s) 5, 830
HapII CCGG 3 cut(s) 70, 1104, 1265
HhaI GCGC 2 cut(s) 369, 646
Hin1II CATG 9 cut(s) 364, 424, 627, 1510, 1532, 1798, 1816, 1894, 1947
Hin6I GCGC 2 cut(s) 367, 644
HinP1I GCGC 2 cut(s) 367, 644
HindIII AAGCTT 2 cut(s) 1151, 1959
HinfI GANTC 6 cut(s) 180, 775, 1330, 1349, 1697, 1883
HpaII CCGG 3 cut(s) 70, 1104, 1265
HphI GGTGA 3 cut(s) 250, 436, 747
Hpy166II GTNNAC 5 cut(s) 229, 427, 591, 1045, 1757
Hpy188I TCNGA 9 cut(s) 220, 774, 1195, 1429, 1493, 1543, 1552, 1624, 1707
Hpy188III TCNNGA 8 cut(s) 388, 632, 1095, 1346, 1373, 1514, 1722, 1769
Hpy8I GTNNAC 5 cut(s) 229, 427, 591, 1045, 1757
HpyAV CCTTC 6 cut(s) 668, 762, 1019, 1067, 1190, 1476
HpyCH4III ACNGT 5 cut(s) 233, 949, 1536, 1761, 1804
HpyCH4IV ACGT 1 cut(s) 169
HpyCH4V TGCA 9 cut(s) 205, 360, 512, 536, 591, 961, 1231, 1528, 1798
HpyF10VI GCNNNNNNNGC 4 cut(s) 36, 366, 509, 1852
HpyF3I CTNAG 6 cut(s) 35, 1540, 1579, 1706, 1817, 1936
HpySE526I ACGT 1 cut(s) 169
Hsp92II CATG 9 cut(s) 364, 424, 627, 1510, 1532, 1798, 1816, 1894, 1947
HspAI GCGC 2 cut(s) 367, 644
Ksp22I TGATCA 1 cut(s) 1459
KspI CCGCGG 1 cut(s) 1630
Kzo9I GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
LmnI GCTCC 2 cut(s) 21, 1106
Lsp1109I GCAGC 6 cut(s) 453, 475, 857, 998, 1639, 1944
MaeI CTAG 6 cut(s) 470, 681, 696, 1323, 1479, 1929
MaeII ACGT 1 cut(s) 169
MaeIII GTNAC 4 cut(s) 283, 439, 745, 1502
MalI GATC 7 cut(s) 255, 408, 1377, 1461, 1638, 1776, 1912
MboI GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
MfeI CAATTG 2 cut(s) 843, 978
MflI RGATCY 4 cut(s) 253, 406, 1636, 1774
MhlI GDGCHC 2 cut(s) 18, 593
MlsI TGGCCA 1 cut(s) 830
MluNI TGGCCA 1 cut(s) 830
MlyI GAGTC 1 cut(s) 769
MmeI TCCRAC 6 cut(s) 183, 378, 797, 1263, 1471, 1674
Mox20I TGGCCA 1 cut(s) 830
Mph1103I ATGCAT 1 cut(s) 1530
MscI TGGCCA 1 cut(s) 830
MseI TTAA 7 cut(s) 132, 818, 1008, 1359, 1574, 1643, 1953
Msp20I TGGCCA 1 cut(s) 830
MspA1I CMGCKG 3 cut(s) 197, 466, 1629
MspI CCGG 3 cut(s) 70, 1104, 1265
MspR9I CCNGG 3 cut(s) 795, 1105, 1265
MunI CAATTG 2 cut(s) 843, 978
MvaI CCWGG 1 cut(s) 795
MvnI CGCG 2 cut(s) 1374, 1629
MwoI GCNNNNNNNGC 4 cut(s) 36, 366, 509, 1852
NciI CCSGG 2 cut(s) 1105, 1265
NcoI CCATGG 1 cut(s) 420
NdeII GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
NheI GCTAGC 1 cut(s) 469
NlaIII CATG 9 cut(s) 364, 424, 627, 1510, 1532, 1798, 1816, 1894, 1947
NlaIV GGNNCC 1 cut(s) 1054
NmeAIII GCCGAG 1 cut(s) 1333
NmuCI GTSAC 2 cut(s) 439, 745
NruI TCGCGA 1 cut(s) 1374
NsbI TGCGCA 1 cut(s) 645
NsiI ATGCAT 1 cut(s) 1530
NspI RCATGY 4 cut(s) 364, 627, 1510, 1894
PciI ACATGT 2 cut(s) 623, 1506
PfeI GAWTC 5 cut(s) 180, 1330, 1349, 1697, 1883
PfoI TCCNGGA 1 cut(s) 793
PinAI ACCGGT 1 cut(s) 69
PkrI GCNGC 7 cut(s) 465, 468, 872, 988, 1631, 1654, 1934
PleI GAGTC 1 cut(s) 769
PmaCI CACGTG 1 cut(s) 170
PmlI CACGTG 1 cut(s) 170
PpsI GAGTC 1 cut(s) 769
Ppu21I YACGTR 1 cut(s) 170
PscI ACATGT 2 cut(s) 623, 1506
PsiI TTATAA 1 cut(s) 1589
Psp6I CCWGG 1 cut(s) 793
PspCI CACGTG 1 cut(s) 170
PspGI CCWGG 1 cut(s) 793
PspN4I GGNNCC 1 cut(s) 1054
PspPI GGNCC 1 cut(s) 4
PsuI RGATCY 4 cut(s) 253, 406, 1636, 1774
PvuII CAGCTG 1 cut(s) 466
RruI TCGCGA 1 cut(s) 1374
RsaI GTAC 4 cut(s) 317, 350, 575, 664
RsaNI GTAC 4 cut(s) 316, 349, 574, 663
SacII CCGCGG 1 cut(s) 1630
SaqAI TTAA 7 cut(s) 132, 818, 1008, 1359, 1574, 1643, 1953
SatI GCNGC 7 cut(s) 464, 467, 871, 987, 1630, 1653, 1933
Sau3AI GATC 7 cut(s) 253, 406, 1375, 1459, 1636, 1774, 1910
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 317
SchI GAGTC 1 cut(s) 769
ScrFI CCNGG 3 cut(s) 795, 1105, 1265
SduI GDGCHC 2 cut(s) 18, 593
SfcI CTRYAG 1 cut(s) 291
Sfr303I CCGCGG 1 cut(s) 1630
SgrBI CCGCGG 1 cut(s) 1630
SmlI CTYRAG 2 cut(s) 54, 1467
SmoI CTYRAG 2 cut(s) 54, 1467
SsiI CCGC 5 cut(s) 197, 454, 1627, 1629, 1682
SspI AATATT 1 cut(s) 1449
SspMI CTAG 6 cut(s) 470, 681, 696, 1323, 1479, 1929
StyD4I CCNGG 3 cut(s) 793, 1103, 1263
StyI CCWWGG 3 cut(s) 25, 324, 420
TaaI ACNGT 5 cut(s) 233, 949, 1536, 1761, 1804
TaiI ACGT 1 cut(s) 172
TaqI TCGA 4 cut(s) 631, 709, 1886, 1984
TatI WGTACW 3 cut(s) 315, 573, 662
TauI GCSGC 1 cut(s) 1632
TfiI GAWTC 5 cut(s) 180, 1330, 1349, 1697, 1883
Tru1I TTAA 7 cut(s) 132, 818, 1008, 1359, 1574, 1643, 1953
Tru9I TTAA 7 cut(s) 132, 818, 1008, 1359, 1574, 1643, 1953
TscAI CASTG 4 cut(s) 109, 448, 593, 1912
TseFI GTSAC 2 cut(s) 439, 745
TseI GCWGC 6 cut(s) 463, 466, 870, 986, 1652, 1932
Tsp45I GTSAC 2 cut(s) 439, 745
TspDTI ATGAA 4 cut(s) 1236, 1427, 1743, 1971
TspRI CASTG 4 cut(s) 109, 448, 593, 1912
VneI GTGCAC 1 cut(s) 589
XagI CCTNNNNNAGG 1 cut(s) 555
XapI RAATTY 5 cut(s) 333, 414, 684, 939, 1165
XceI RCATGY 4 cut(s) 364, 627, 1510, 1894
XspI CTAG 6 cut(s) 470, 681, 696, 1323, 1479, 1929
ZrmI AGTACT 1 cut(s) 317
Zsp2I ATGCAT 1 cut(s) 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.