26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0031291 |
| rosa_laevigata | RLG00000019651 RLG00000033298 |
| rosa_rugosa | Rorug05G0123800 |
| rosa_samantha | Rh5AG217100 Rh5BG216800 Rh5CG240400 Rh5DG221900 |
| rosa_wichuraiana | Rw5G019850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 320 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 50 |
| AflII | CTTAAG | 1 cut(s) | 310 |
| AgsI | TTSAA | 2 cut(s) | 96, 331 |
| AluBI | AGCT | 1 cut(s) | 164 |
| AluI | AGCT | 1 cut(s) | 164 |
| Alw21I | GWGCWC | 1 cut(s) | 139 |
| Alw44I | GTGCAC | 1 cut(s) | 135 |
| ApaLI | GTGCAC | 1 cut(s) | 135 |
| AsuHPI | GGTGA | 3 cut(s) | 165, 251, 352 |
| BaeGI | GKGCMC | 2 cut(s) | 139, 325 |
| BanI | GGYRCC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 1 cut(s) | 139 |
| BccI | CCATC | 1 cut(s) | 44 |
| BfaI | CTAG | 1 cut(s) | 348 |
| BfrI | CTTAAG | 1 cut(s) | 310 |
| BmiI | GGNNCC | 1 cut(s) | 322 |
| BmsI | GCATC | 2 cut(s) | 157, 179 |
| BsaJI | CCNNGG | 1 cut(s) | 267 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 50 |
| Bse3DI | GCAATG | 2 cut(s) | 18, 232 |
| BseDI | CCNNGG | 1 cut(s) | 267 |
| BseGI | GGATG | 1 cut(s) | 133 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BseMI | GCAATG | 2 cut(s) | 18, 232 |
| BseSI | GKGCMC | 2 cut(s) | 139, 325 |
| BshNI | GGYRCC | 1 cut(s) | 320 |
| BsiHKAI | GWGCWC | 1 cut(s) | 139 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BsmI | GAATGC | 1 cut(s) | 4 |
| Bsp1286I | GDGCHC | 2 cut(s) | 139, 325 |
| Bsp143I | GATC | 1 cut(s) | 205 |
| BspLI | GGNNCC | 1 cut(s) | 322 |
| BspT107I | GGYRCC | 1 cut(s) | 320 |
| BspTI | CTTAAG | 1 cut(s) | 310 |
| BsrDI | GCAATG | 2 cut(s) | 18, 232 |
| BssECI | CCNNGG | 1 cut(s) | 267 |
| BssMI | GATC | 1 cut(s) | 205 |
| Bst4CI | ACNGT | 2 cut(s) | 45, 245 |
| BstAFI | CTTAAG | 1 cut(s) | 310 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 17, 143 |
| BstC8I | GCNNGC | 2 cut(s) | 18, 114 |
| BstF5I | GGATG | 1 cut(s) | 133 |
| BstKTI | GATC | 1 cut(s) | 208 |
| BstMBI | GATC | 1 cut(s) | 205 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 17, 143, 176, 269 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstSLI | GKGCMC | 2 cut(s) | 139, 325 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 124 |
| BtsCI | GGATG | 1 cut(s) | 133 |
| Cac8I | GCNNGC | 2 cut(s) | 18, 114 |
| CviAII | CATG | 3 cut(s) | 113, 118, 354 |
| CviJI | RGCY | 2 cut(s) | 164, 272 |
| CviKI_1 | RGCY | 2 cut(s) | 164, 272 |
| DpnI | GATC | 1 cut(s) | 207 |
| DpnII | GATC | 1 cut(s) | 205 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 172 |
| FaeI | CATG | 3 cut(s) | 116, 121, 357 |
| FaiI | YATR | 8 cut(s) | 114, 119, 123, 125, 194, 222, 305, 355 |
| FatI | CATG | 3 cut(s) | 112, 117, 353 |
| FokI | GGATG | 1 cut(s) | 140 |
| FspBI | CTAG | 1 cut(s) | 348 |
| Hin1II | CATG | 3 cut(s) | 116, 121, 357 |
| HinfI | GANTC | 1 cut(s) | 83 |
| HphI | GGTGA | 3 cut(s) | 165, 251, 352 |
| Hpy166II | GTNNAC | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 4 cut(s) | 49, 57, 210, 268 |
| Hpy188III | TCNNGA | 1 cut(s) | 388 |
| Hpy8I | GTNNAC | 1 cut(s) | 137 |
| HpyAV | CCTTC | 1 cut(s) | 117 |
| HpyCH4III | ACNGT | 2 cut(s) | 45, 245 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 137, 146, 170 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 17, 143, 176, 269 |
| Hsp92II | CATG | 3 cut(s) | 116, 121, 357 |
| Kzo9I | GATC | 1 cut(s) | 205 |
| LpnPI | CCDG | 5 cut(s) | 48, 189, 269, 312, 349 |
| LweI | GCATC | 2 cut(s) | 157, 179 |
| MaeI | CTAG | 1 cut(s) | 348 |
| MaeIII | GTNAC | 2 cut(s) | 239, 340 |
| MalI | GATC | 1 cut(s) | 207 |
| MboI | GATC | 1 cut(s) | 205 |
| MboII | GAAGA | 1 cut(s) | 84 |
| MhlI | GDGCHC | 2 cut(s) | 139, 325 |
| MluCI | AATT | 1 cut(s) | 326 |
| MmeI | TCCRAC | 1 cut(s) | 58 |
| MnlI | CCTC | 2 cut(s) | 178, 262 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 172 |
| MseI | TTAA | 3 cut(s) | 72, 311, 335 |
| MslI | CAYNNNNRTG | 1 cut(s) | 122 |
| MspCI | CTTAAG | 1 cut(s) | 310 |
| Mva1269I | GAATGC | 1 cut(s) | 4 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 17, 143, 176, 269 |
| NdeII | GATC | 1 cut(s) | 205 |
| NlaIII | CATG | 3 cut(s) | 116, 121, 357 |
| NlaIV | GGNNCC | 1 cut(s) | 322 |
| NmuCI | GTSAC | 2 cut(s) | 239, 340 |
| NsiI | ATGCAT | 2 cut(s) | 6, 172 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PaeI | GCATGC | 1 cut(s) | 116 |
| PctI | GAATGC | 1 cut(s) | 4 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PspN4I | GGNNCC | 1 cut(s) | 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 122 |
| SaqAI | TTAA | 3 cut(s) | 72, 311, 335 |
| Sau3AI | GATC | 1 cut(s) | 205 |
| SduI | GDGCHC | 2 cut(s) | 139, 325 |
| SetI | ASST | 4 cut(s) | 37, 166, 322, 349 |
| SfaNI | GCATC | 2 cut(s) | 157, 179 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 122 |
| SmlI | CTYRAG | 1 cut(s) | 310 |
| SmoI | CTYRAG | 1 cut(s) | 310 |
| SphI | GCATGC | 1 cut(s) | 116 |
| Sse9I | AATT | 1 cut(s) | 326 |
| SspMI | CTAG | 1 cut(s) | 348 |
| TaaI | ACNGT | 2 cut(s) | 45, 245 |
| TasI | AATT | 1 cut(s) | 326 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| Tru1I | TTAA | 3 cut(s) | 72, 311, 335 |
| Tru9I | TTAA | 3 cut(s) | 72, 311, 335 |
| TseFI | GTSAC | 2 cut(s) | 239, 340 |
| Tsp45I | GTSAC | 2 cut(s) | 239, 340 |
| TspGWI | ACGGA | 1 cut(s) | 197 |
| Vha464I | CTTAAG | 1 cut(s) | 310 |
| VneI | GTGCAC | 1 cut(s) | 135 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 348 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 172 |