26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0031291 |
| rosa_laevigata | RLG00000019651 RLG00000033298 |
| rosa_rugosa | Rorug05G0123800 |
| rosa_samantha | Rh5AG217100 Rh5BG216800 Rh5CG240400 Rh5DG221900 |
| rosa_wichuraiana | Rw5G019850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 203 |
| AciI | CCGC | 1 cut(s) | 136 |
| AflII | CTTAAG | 1 cut(s) | 193 |
| AgsI | TTSAA | 1 cut(s) | 214 |
| AluBI | AGCT | 1 cut(s) | 47 |
| AluI | AGCT | 1 cut(s) | 47 |
| Alw21I | GWGCWC | 1 cut(s) | 22 |
| Alw44I | GTGCAC | 1 cut(s) | 18 |
| ApaLI | GTGCAC | 1 cut(s) | 18 |
| AsuHPI | GGTGA | 3 cut(s) | 48, 134, 235 |
| BaeGI | GKGCMC | 2 cut(s) | 22, 208 |
| BanI | GGYRCC | 1 cut(s) | 203 |
| Bbv12I | GWGCWC | 1 cut(s) | 22 |
| BfaI | CTAG | 1 cut(s) | 231 |
| BfrI | CTTAAG | 1 cut(s) | 193 |
| BmiI | GGNNCC | 1 cut(s) | 205 |
| BmsI | GCATC | 2 cut(s) | 40, 62 |
| BsaJI | CCNNGG | 1 cut(s) | 150 |
| Bse3DI | GCAATG | 1 cut(s) | 115 |
| BseDI | CCNNGG | 1 cut(s) | 150 |
| BseGI | GGATG | 1 cut(s) | 16 |
| BseMI | GCAATG | 1 cut(s) | 115 |
| BseSI | GKGCMC | 2 cut(s) | 22, 208 |
| BshNI | GGYRCC | 1 cut(s) | 203 |
| BsiHKAI | GWGCWC | 1 cut(s) | 22 |
| Bsp1286I | GDGCHC | 2 cut(s) | 22, 208 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspACI | CCGC | 1 cut(s) | 136 |
| BspLI | GGNNCC | 1 cut(s) | 205 |
| BspT107I | GGYRCC | 1 cut(s) | 203 |
| BspTI | CTTAAG | 1 cut(s) | 193 |
| BsrDI | GCAATG | 1 cut(s) | 115 |
| BssECI | CCNNGG | 1 cut(s) | 150 |
| BssMI | GATC | 1 cut(s) | 88 |
| BstAFI | CTTAAG | 1 cut(s) | 193 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 26 |
| BstF5I | GGATG | 1 cut(s) | 16 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 26, 59, 152 |
| BstSLI | GKGCMC | 2 cut(s) | 22, 208 |
| BtsCI | GGATG | 1 cut(s) | 16 |
| CviAII | CATG | 1 cut(s) | 237 |
| CviJI | RGCY | 2 cut(s) | 47, 155 |
| CviKI_1 | RGCY | 2 cut(s) | 47, 155 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| EcoT22I | ATGCAT | 1 cut(s) | 55 |
| FaeI | CATG | 1 cut(s) | 240 |
| FaiI | YATR | 5 cut(s) | 8, 77, 105, 188, 238 |
| FatI | CATG | 1 cut(s) | 236 |
| FokI | GGATG | 1 cut(s) | 23 |
| FspBI | CTAG | 1 cut(s) | 231 |
| Hin1II | CATG | 1 cut(s) | 240 |
| HphI | GGTGA | 3 cut(s) | 48, 134, 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 20 |
| Hpy188I | TCNGA | 2 cut(s) | 93, 151 |
| Hpy188III | TCNNGA | 1 cut(s) | 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 20 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 29, 53 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 26, 59, 152 |
| Hsp92II | CATG | 1 cut(s) | 240 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LpnPI | CCDG | 4 cut(s) | 72, 152, 195, 232 |
| LweI | GCATC | 2 cut(s) | 40, 62 |
| MaeI | CTAG | 1 cut(s) | 231 |
| MaeIII | GTNAC | 2 cut(s) | 122, 223 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MhlI | GDGCHC | 2 cut(s) | 22, 208 |
| MluCI | AATT | 2 cut(s) | 127, 209 |
| MnlI | CCTC | 2 cut(s) | 61, 145 |
| Mph1103I | ATGCAT | 1 cut(s) | 55 |
| MseI | TTAA | 2 cut(s) | 194, 218 |
| MspCI | CTTAAG | 1 cut(s) | 193 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 26, 59, 152 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIII | CATG | 1 cut(s) | 240 |
| NlaIV | GGNNCC | 1 cut(s) | 205 |
| NmuCI | GTSAC | 2 cut(s) | 122, 223 |
| NsiI | ATGCAT | 1 cut(s) | 55 |
| PspN4I | GGNNCC | 1 cut(s) | 205 |
| SaqAI | TTAA | 2 cut(s) | 194, 218 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| SduI | GDGCHC | 2 cut(s) | 22, 208 |
| SetI | ASST | 3 cut(s) | 49, 205, 232 |
| SfaNI | GCATC | 2 cut(s) | 40, 62 |
| SmlI | CTYRAG | 1 cut(s) | 193 |
| SmoI | CTYRAG | 1 cut(s) | 193 |
| Sse9I | AATT | 2 cut(s) | 127, 209 |
| SsiI | CCGC | 1 cut(s) | 136 |
| SspMI | CTAG | 1 cut(s) | 231 |
| TasI | AATT | 2 cut(s) | 127, 209 |
| Tru1I | TTAA | 2 cut(s) | 194, 218 |
| Tru9I | TTAA | 2 cut(s) | 194, 218 |
| TseFI | GTSAC | 2 cut(s) | 122, 223 |
| Tsp45I | GTSAC | 2 cut(s) | 122, 223 |
| TspGWI | ACGGA | 1 cut(s) | 80 |
| Vha464I | CTTAAG | 1 cut(s) | 193 |
| VneI | GTGCAC | 1 cut(s) | 18 |
| XspI | CTAG | 1 cut(s) | 231 |
| Zsp2I | ATGCAT | 1 cut(s) | 55 |