No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55640 |
| fragaria_vesca | FvH4_3g29370 |
| malus_domestica | MD03G1184300.v1.1 MD11G1201100.v1.1 |
| prunus_persica | Prupe.4G242300_v2.0.a1 Prupe.4G242300_v2.0.a1 |
| pyrus_communis | pycom11g17350 |
| rosa_chinensis | RchiOBHm_Chr5g0053761 |
| rosa_laevigata | RLG00000034901 |
| rosa_multiflora | Rmu_sc0001759.1_g000025 |
| rosa_roxburghii | Rroxscaffold_1G00026830 |
| rosa_rugosa | Rorug05G0282400 |
| rosa_samantha | Rh5AG352900 Rh5BG364600 Rh5CG389500 Rh5DG379400 |
| rosa_wichuraiana | Rw5G033340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 450 |
| AciI | CCGC | 1 cut(s) | 315 |
| AcsI | RAATTY | 1 cut(s) | 253 |
| AgsI | TTSAA | 4 cut(s) | 38, 280, 402, 443 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 154, 186 |
| AluBI | AGCT | 1 cut(s) | 105 |
| AluI | AGCT | 1 cut(s) | 105 |
| Alw26I | GTCTC | 3 cut(s) | 111, 280, 438 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 289 |
| ApeKI | GCWGC | 2 cut(s) | 241, 378 |
| ApoI | RAATTY | 1 cut(s) | 253 |
| AspS9I | GGNCC | 2 cut(s) | 4, 209 |
| AvaII | GGWCC | 2 cut(s) | 4, 209 |
| BanI | GGYRCC | 1 cut(s) | 450 |
| BanII | GRGCYC | 1 cut(s) | 223 |
| BbsI | GAAGAC | 1 cut(s) | 162 |
| BbvI | GCAGC | 2 cut(s) | 253, 390 |
| BccI | CCATC | 1 cut(s) | 80 |
| BceAI | ACGGC | 1 cut(s) | 249 |
| BcoDI | GTCTC | 3 cut(s) | 111, 280, 438 |
| BfaI | CTAG | 1 cut(s) | 261 |
| BisI | GCNGC | 2 cut(s) | 242, 379 |
| BlsI | GCNGC | 2 cut(s) | 243, 380 |
| Bme18I | GGWCC | 2 cut(s) | 4, 209 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 209 |
| BmiI | GGNNCC | 3 cut(s) | 6, 222, 452 |
| BmrI | ACTGGG | 1 cut(s) | 451 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BmuI | ACTGGG | 1 cut(s) | 451 |
| BpiI | GAAGAC | 1 cut(s) | 162 |
| BsaI | GGTCTC | 1 cut(s) | 111 |
| Bse1I | ACTGG | 3 cut(s) | 325, 413, 457 |
| BseMII | CTCAG | 1 cut(s) | 449 |
| BseNI | ACTGG | 3 cut(s) | 325, 413, 457 |
| BseXI | GCAGC | 2 cut(s) | 253, 390 |
| BshNI | GGYRCC | 1 cut(s) | 450 |
| BslFI | GGGAC | 3 cut(s) | 92, 331, 419 |
| BsmAI | GTCTC | 3 cut(s) | 111, 280, 438 |
| BsmFI | GGGAC | 3 cut(s) | 92, 331, 419 |
| Bso31I | GGTCTC | 1 cut(s) | 111 |
| Bsp1286I | GDGCHC | 1 cut(s) | 223 |
| Bsp143I | GATC | 1 cut(s) | 301 |
| BspACI | CCGC | 1 cut(s) | 315 |
| BspCNI | CTCAG | 1 cut(s) | 448 |
| BspHI | TCATGA | 1 cut(s) | 427 |
| BspLI | GGNNCC | 3 cut(s) | 6, 222, 452 |
| BspT107I | GGYRCC | 1 cut(s) | 450 |
| BspTNI | GGTCTC | 1 cut(s) | 111 |
| BsrI | ACTGG | 3 cut(s) | 325, 413, 457 |
| BssMI | GATC | 1 cut(s) | 301 |
| Bst4CI | ACNGT | 2 cut(s) | 234, 425 |
| Bst6I | CTCTTC | 2 cut(s) | 186, 302 |
| BstDEI | CTNAG | 2 cut(s) | 205, 435 |
| BstKTI | GATC | 1 cut(s) | 304 |
| BstMAI | GTCTC | 3 cut(s) | 111, 280, 438 |
| BstMBI | GATC | 1 cut(s) | 301 |
| BstV1I | GCAGC | 2 cut(s) | 253, 390 |
| BstV2I | GAAGAC | 1 cut(s) | 162 |
| BtsI | GCAGTG | 1 cut(s) | 14 |
| BtsIMutI | CAGTG | 3 cut(s) | 14, 81, 421 |
| CaiI | CAGNNNCTG | 1 cut(s) | 289 |
| CciI | TCATGA | 1 cut(s) | 427 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 209 |
| CviAII | CATG | 2 cut(s) | 385, 428 |
| CviJI | RGCY | 3 cut(s) | 105, 221, 264 |
| CviKI_1 | RGCY | 3 cut(s) | 105, 221, 264 |
| DdeI | CTNAG | 2 cut(s) | 205, 435 |
| DpnI | GATC | 1 cut(s) | 303 |
| DpnII | GATC | 1 cut(s) | 301 |
| Eam1104I | CTCTTC | 2 cut(s) | 186, 302 |
| EarI | CTCTTC | 2 cut(s) | 186, 302 |
| Eco24I | GRGCYC | 1 cut(s) | 223 |
| Eco31I | GGTCTC | 1 cut(s) | 111 |
| Eco47I | GGWCC | 2 cut(s) | 4, 209 |
| EcoT38I | GRGCYC | 1 cut(s) | 223 |
| FaeI | CATG | 2 cut(s) | 388, 431 |
| FaiI | YATR | 2 cut(s) | 386, 429 |
| FaqI | GGGAC | 3 cut(s) | 92, 331, 419 |
| FatI | CATG | 2 cut(s) | 384, 427 |
| FauI | CCCGC | 1 cut(s) | 308 |
| Fnu4HI | GCNGC | 2 cut(s) | 242, 379 |
| FriOI | GRGCYC | 1 cut(s) | 223 |
| Fsp4HI | GCNGC | 2 cut(s) | 242, 379 |
| FspBI | CTAG | 1 cut(s) | 261 |
| GluI | GCNGC | 2 cut(s) | 242, 379 |
| Hin1II | CATG | 2 cut(s) | 388, 431 |
| HindIII | AAGCTT | 1 cut(s) | 103 |
| HinfI | GANTC | 3 cut(s) | 90, 97, 431 |
| Hpy188I | TCNGA | 2 cut(s) | 116, 306 |
| Hpy188III | TCNNGA | 2 cut(s) | 94, 428 |
| HpyAV | CCTTC | 3 cut(s) | 18, 180, 237 |
| HpyCH4III | ACNGT | 2 cut(s) | 234, 425 |
| HpyF3I | CTNAG | 2 cut(s) | 205, 435 |
| Hsp92II | CATG | 2 cut(s) | 388, 431 |
| Kzo9I | GATC | 1 cut(s) | 301 |
| LmnI | GCTCC | 2 cut(s) | 148, 226 |
| LpnPI | CCDG | 2 cut(s) | 306, 394 |
| Lsp1109I | GCAGC | 2 cut(s) | 253, 390 |
| LweI | GCATC | 1 cut(s) | 130 |
| MaeI | CTAG | 1 cut(s) | 261 |
| MalI | GATC | 1 cut(s) | 303 |
| MboI | GATC | 1 cut(s) | 301 |
| MboII | GAAGA | 4 cut(s) | 167, 203, 249, 319 |
| MhlI | GDGCHC | 1 cut(s) | 223 |
| MluCI | AATT | 1 cut(s) | 253 |
| MlyI | GAGTC | 1 cut(s) | 440 |
| MmeI | TCCRAC | 1 cut(s) | 318 |
| MnlI | CCTC | 2 cut(s) | 177, 241 |
| MslI | CAYNNNNRTG | 1 cut(s) | 426 |
| NdeII | GATC | 1 cut(s) | 301 |
| NlaIII | CATG | 2 cut(s) | 388, 431 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 222, 452 |
| PagI | TCATGA | 1 cut(s) | 427 |
| PfeI | GAWTC | 2 cut(s) | 90, 97 |
| PkrI | GCNGC | 2 cut(s) | 243, 380 |
| PleI | GAGTC | 1 cut(s) | 439 |
| PpsI | GAGTC | 1 cut(s) | 439 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 222, 452 |
| PspPI | GGNCC | 2 cut(s) | 4, 209 |
| PstNI | CAGNNNCTG | 1 cut(s) | 289 |
| RseI | CAYNNNNRTG | 1 cut(s) | 426 |
| SatI | GCNGC | 2 cut(s) | 242, 379 |
| Sau3AI | GATC | 1 cut(s) | 301 |
| Sau96I | GGNCC | 2 cut(s) | 4, 209 |
| SchI | GAGTC | 1 cut(s) | 440 |
| SduI | GDGCHC | 1 cut(s) | 223 |
| SetI | ASST | 4 cut(s) | 34, 107, 169, 252 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SinI | GGWCC | 2 cut(s) | 4, 209 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 426 |
| Sse9I | AATT | 1 cut(s) | 253 |
| SsiI | CCGC | 1 cut(s) | 315 |
| SspMI | CTAG | 1 cut(s) | 261 |
| TaaI | ACNGT | 2 cut(s) | 234, 425 |
| TasI | AATT | 1 cut(s) | 253 |
| TfiI | GAWTC | 2 cut(s) | 90, 97 |
| TscAI | CASTG | 3 cut(s) | 21, 88, 428 |
| TseI | GCWGC | 2 cut(s) | 241, 378 |
| TspDTI | ATGAA | 1 cut(s) | 387 |
| TspRI | CASTG | 3 cut(s) | 21, 88, 428 |
| VpaK11BI | GGWCC | 2 cut(s) | 4, 209 |
| XapI | RAATTY | 1 cut(s) | 253 |
| XspI | CTAG | 1 cut(s) | 261 |