Rh5CG204200

Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
20571517 .. 20576829
5313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG204200.1

Sequence Viewer

Length: 1191 bp
ATGGCTCGAATATCACTATGCAATCAGCTAATCCCTTCCCTCCTTGTTCCAATGAAGCAGAGGAACCACTATCAGCTCATGGGAGTCATAGGCTTAACCAGAGGGCGCCGCTTCTCTGCTTCTTCCTCACCCAAGATTAGCATGAGCCTCAAAGCCGGCATCGTCGGCCTCCCTAACGTCGGAAAGTCCACGCTTTTCAACGCCGTCGTTGAGAATGGGAAGGCTCAAGCTGCCAATTTTCCGTTTTGTACGATAGAGCCAAATGTAGGGATTGTTGCAGTTCCGGATCCACGCCTGAATGTACTTTCTGATCTCAGCAAGTCTCAGCGCGTAGTCCCGGCATCTTTGGAGCTTGTGGATATTGCTGGCCTTGTGAAGGGTGCTAGTCAAGGAGAGGGGTTGGGGAATAAATTCTTGTCAAATATTCGCGAGGTGGACTCCATTCTTCAGGTAGTTCGATGTTTTGAAGATAATGATGTTGTTCACGTGAATGGGAAAGTTGATCCTAAGGATGATATTGATGTTATCAACTTAGAGCTGATTTTCTCAGATCTGGACCAGGAGGAATCAGAAAGGTCTGGCTTGGAGAGAATTCAGCAGGCACTCATGGATGGGAAACCAGCACGATCAGTCACTTTAACAGATTCAGAAAATGAATCTATAAAGCATCTGTGCTTGCTTACAATGAAACCTGTTATCTATGTTGCTAATGTTGCTGAATCTGATCTAGCTGAACCTGGAGAGAATCCTCATGTCAAAGAAGTGATGAATCTTGCTTCTGAGTTGCAATGTGGACTAGTAACAATTTCAGCACAGGTTGAGTCTGAACTTACTGAACTACCATCTGAAGAAAGAACAGAATTTTTGGAATCTCTTGGTGTTAGTGAAAGTGGTCTCGGAAACCTTATCAGAGCAACATATGGTGTTTTGGGGCTCCGTACTTACTTTACTTCAGGAGAGAAGGAAACAAAAGCATGGACCATTCTTGCAGGAATGACTGCACCTCAAGCAGCTGGGGTCATCCACTCTGACTTTGAGAAAGGTTTCATTCGAGCTGAGACAGTGTCTTATGATGATTTTGTTGCTGCTGGTTCACTTGCTGCAGCAAGGGAAAGAGGAGTTTTAAGATCTGAGGGTAAAGAATACATCGTACAAGAAGGAGATGTGATGCTGTTTCGGTTTAACGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

396

Amino Acids

42.94

Weight (kDa)

4.94

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 52 - 160 2.5e-20 50S ribosome-binding GTPase
FeoB_N PF02421 53 - 100 4.5e-06 Ferrous iron transport protein B
YchF-GTPase_C PF06071 312 - 395 8.3e-37 Protein of unknown function (DUF933)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 105
AccII CGCG 2 cut(s) 330, 429
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 1 cut(s) 109
AclWI GGATC 3 cut(s) 281, 294, 497
AcsI RAATTY 3 cut(s) 410, 591, 860
AcuI CTGAAG 3 cut(s) 431, 867, 936
AcvI CACGTG 1 cut(s) 487
AcyI GRCGYC 1 cut(s) 106
AfaI GTAC 4 cut(s) 250, 303, 940, 1152
AfiI CCNNNNNNNGG 3 cut(s) 179, 266, 376
AgsI TTSAA 2 cut(s) 199, 467
AhlI ACTAGT 1 cut(s) 796
AjnI CCWGG 2 cut(s) 558, 736
AluBI AGCT 8 cut(s) 28, 76, 230, 352, 538, 731, 1013, 1055
AluI AGCT 8 cut(s) 28, 76, 230, 352, 538, 731, 1013, 1055
Alw26I GTCTC 3 cut(s) 327, 899, 1052
AlwI GGATC 3 cut(s) 281, 294, 497
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 2 cut(s) 166, 367
ApeKI GCWGC 5 cut(s) 230, 1010, 1085, 1100, 1103
ApoI RAATTY 3 cut(s) 410, 591, 860
Asp700I GAANNNNTTC 2 cut(s) 410, 1043
AspLEI GCGC 2 cut(s) 108, 330
AspS9I GGNCC 2 cut(s) 556, 978
AsuC2I CCSGG 1 cut(s) 338
AsuHPI GGTGA 1 cut(s) 120
AvaII GGWCC 2 cut(s) 556, 978
AxyI CCTNAGG 1 cut(s) 507
BamHI GGATCC 1 cut(s) 286
BanI GGYRCC 1 cut(s) 105
BanII GRGCYC 1 cut(s) 936
BbrPI CACGTG 1 cut(s) 487
BbvI GCAGC 5 cut(s) 217, 1022, 1072, 1087, 1115
BccI CCATC 2 cut(s) 605, 850
BceAI ACGGC 1 cut(s) 188
BciT130I CCWGG 2 cut(s) 560, 738
BcnI CCSGG 1 cut(s) 338
BcoDI GTCTC 3 cut(s) 327, 899, 1052
BcuI ACTAGT 1 cut(s) 796
BfaI CTAG 3 cut(s) 384, 728, 797
BfmI CTRYAG 1 cut(s) 1101
BfoI RGCGCY 1 cut(s) 109
BglII AGATCT 2 cut(s) 550, 1127
BisI GCNGC 6 cut(s) 109, 231, 1011, 1086, 1101, 1104
BlsI GCNGC 6 cut(s) 110, 232, 1012, 1087, 1102, 1105
Bme1390I CCNGG 3 cut(s) 338, 560, 738
Bme18I GGWCC 2 cut(s) 556, 978
BmgT120I GGNCC 2 cut(s) 556, 978
BmiI GGNNCC 4 cut(s) 65, 107, 288, 935
BmrFI CCNGG 3 cut(s) 338, 560, 738
BmsI GCATC 4 cut(s) 168, 350, 676, 1158
BplI GAGNNNNNCTC 2 cut(s) 422, 454
BpmI CTGGAG 1 cut(s) 759
BpuEI CTTGAG 2 cut(s) 210, 990
BpuMI CCSGG 1 cut(s) 338
BsaAI YACGTR 1 cut(s) 487
BsaHI GRCGYC 1 cut(s) 106
BsaI GGTCTC 1 cut(s) 899
BsaWI WCCGGW 1 cut(s) 283
Bsc4I CCNNNNNNNGG 3 cut(s) 179, 266, 376
Bse118I RCCGGY 1 cut(s) 155
Bse21I CCTNAGG 1 cut(s) 507
Bse3DI GCAATG 1 cut(s) 794
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 2 cut(s) 560, 738
BseGI GGATG 3 cut(s) 517, 616, 1020
BseLI CCNNNNNNNGG 3 cut(s) 179, 266, 376
BseMI GCAATG 1 cut(s) 794
BseMII CTCAG 6 cut(s) 328, 338, 561, 771, 1047, 1122
BseRI GAGGAG 1 cut(s) 1131
BseXI GCAGC 5 cut(s) 217, 1022, 1072, 1087, 1115
BseYI CCCAGC 1 cut(s) 1013
BsgI GTGCAG 1 cut(s) 984
Bsh1236I CGCG 2 cut(s) 330, 429
BshFI GGCC 2 cut(s) 168, 369
BshNI GGYRCC 1 cut(s) 105
BsiSI CCGG 3 cut(s) 156, 284, 338
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 3 cut(s) 179, 266, 376
BsmAI GTCTC 3 cut(s) 327, 899, 1052
BsmFI GGGAC 1 cut(s) 320
BsnI GGCC 2 cut(s) 168, 369
Bso31I GGTCTC 1 cut(s) 899
Bsp1286I GDGCHC 1 cut(s) 936
Bsp13I TCCGGA 1 cut(s) 283
Bsp143I GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
Bsp68I TCGCGA 1 cut(s) 429
BspACI CCGC 1 cut(s) 109
BspANI GGCC 2 cut(s) 168, 369
BspCNI CTCAG 6 cut(s) 327, 337, 560, 772, 1048, 1123
BspEI TCCGGA 1 cut(s) 283
BspFNI CGCG 2 cut(s) 330, 429
BspLI GGNNCC 4 cut(s) 65, 107, 288, 935
BspMAI CTGCAG 1 cut(s) 1105
BspPI GGATC 3 cut(s) 281, 294, 497
BspT107I GGYRCC 1 cut(s) 105
BspTNI GGTCTC 1 cut(s) 899
BsrDI GCAATG 1 cut(s) 794
BsrFI RCCGGY 1 cut(s) 155
BssAI RCCGGY 1 cut(s) 155
BssMI GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
BssNI GRCGYC 1 cut(s) 106
Bst2UI CCWGG 2 cut(s) 560, 738
Bst4CI ACNGT 1 cut(s) 1063
BstACI GRCGYC 1 cut(s) 106
BstBAI YACGTR 1 cut(s) 487
BstC8I GCNNGC 4 cut(s) 157, 367, 600, 677
BstDEI CTNAG 8 cut(s) 314, 324, 507, 532, 547, 780, 1056, 1131
BstENI CCTNNNNNAGG 1 cut(s) 374
BstF5I GGATG 3 cut(s) 517, 616, 1020
BstFNI CGCG 2 cut(s) 330, 429
BstH2I RGCGCY 1 cut(s) 109
BstHHI GCGC 2 cut(s) 108, 330
BstKTI GATC 7 cut(s) 289, 313, 505, 553, 629, 727, 1130
BstMAI GTCTC 3 cut(s) 327, 899, 1052
BstMBI GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
BstMWI GCNNNNNNNGC 4 cut(s) 165, 230, 713, 1007
BstNI CCWGG 2 cut(s) 560, 738
BstSCI CCNGG 3 cut(s) 336, 558, 736
BstSFI CTRYAG 1 cut(s) 1101
BstUI CGCG 2 cut(s) 330, 429
BstV1I GCAGC 5 cut(s) 217, 1022, 1072, 1087, 1115
BstX2I RGATCY 3 cut(s) 286, 550, 1127
BstYI RGATCY 3 cut(s) 286, 550, 1127
Bsu36I CCTNAGG 1 cut(s) 507
BsuRI GGCC 2 cut(s) 168, 369
BtsCI GGATG 3 cut(s) 517, 616, 1020
BtsIMutI CAGTG 1 cut(s) 1068
BtuMI TCGCGA 1 cut(s) 429
Cac8I GCNNGC 4 cut(s) 157, 367, 600, 677
CfoI GCGC 2 cut(s) 108, 330
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 2 cut(s) 556, 978
Csp6I GTAC 4 cut(s) 249, 302, 939, 1151
CviAII CATG 5 cut(s) 79, 142, 607, 752, 975
CviQI GTAC 4 cut(s) 249, 302, 939, 1151
DdeI CTNAG 8 cut(s) 314, 324, 507, 532, 547, 780, 1056, 1131
DinI GGCGCC 1 cut(s) 107
DpnI GATC 7 cut(s) 288, 312, 504, 552, 628, 726, 1129
DpnII GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
Eco24I GRGCYC 1 cut(s) 936
Eco31I GGTCTC 1 cut(s) 899
Eco47I GGWCC 2 cut(s) 556, 978
Eco57I CTGAAG 3 cut(s) 431, 867, 936
Eco72I CACGTG 1 cut(s) 487
Eco81I CCTNAGG 1 cut(s) 507
EcoNI CCTNNNNNAGG 1 cut(s) 374
EcoRI GAATTC 1 cut(s) 591
EcoRII CCWGG 2 cut(s) 558, 736
EcoT38I GRGCYC 1 cut(s) 936
EgeI GGCGCC 1 cut(s) 107
EheI GGCGCC 1 cut(s) 107
FaeI CATG 5 cut(s) 82, 145, 610, 755, 978
FaqI GGGAC 1 cut(s) 320
FatI CATG 5 cut(s) 78, 141, 606, 751, 974
FauNDI CATATG 1 cut(s) 919
Fnu4HI GCNGC 6 cut(s) 109, 231, 1011, 1086, 1101, 1104
FokI GGATG 3 cut(s) 524, 623, 1007
FriOI GRGCYC 1 cut(s) 936
Fsp4HI GCNGC 6 cut(s) 109, 231, 1011, 1086, 1101, 1104
FspBI CTAG 3 cut(s) 384, 728, 797
GlaI GCGC 2 cut(s) 107, 329
GluI GCNGC 6 cut(s) 109, 231, 1011, 1086, 1101, 1104
GsaI CCCAGC 1 cut(s) 1017
GsuI CTGGAG 1 cut(s) 759
HaeII RGCGCY 1 cut(s) 109
HaeIII GGCC 2 cut(s) 168, 369
HapII CCGG 3 cut(s) 156, 284, 338
HhaI GCGC 2 cut(s) 108, 330
Hin1I GRCGYC 1 cut(s) 106
Hin1II CATG 5 cut(s) 82, 145, 610, 755, 978
Hin6I GCGC 2 cut(s) 106, 328
HinP1I GCGC 2 cut(s) 106, 328
HpaII CCGG 3 cut(s) 156, 284, 338
HphI GGTGA 1 cut(s) 120
Hpy166II GTNNAC 5 cut(s) 189, 436, 484, 794, 1094
Hpy188III TCNNGA 4 cut(s) 284, 428, 554, 954
Hpy8I GTNNAC 5 cut(s) 189, 436, 484, 794, 1094
Hpy99I CGWCG 3 cut(s) 167, 182, 209
HpyAV CCTTC 5 cut(s) 45, 214, 370, 955, 1151
HpyCH4III ACNGT 1 cut(s) 1063
HpyCH4IV ACGT 3 cut(s) 177, 486, 1185
HpyCH4V TGCA 6 cut(s) 21, 278, 787, 989, 1001, 1103
HpyF10VI GCNNNNNNNGC 4 cut(s) 165, 230, 713, 1007
HpyF3I CTNAG 8 cut(s) 314, 324, 507, 532, 547, 780, 1056, 1131
HpySE526I ACGT 3 cut(s) 177, 486, 1185
Hsp92I GRCGYC 1 cut(s) 106
Hsp92II CATG 5 cut(s) 82, 145, 610, 755, 978
HspAI GCGC 2 cut(s) 106, 328
KasI GGCGCC 1 cut(s) 105
Kpn2I TCCGGA 1 cut(s) 283
KroI GCCGGC 1 cut(s) 155
KroNI GCCGGC 1 cut(s) 157
Kzo9I GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
LmnI GCTCC 2 cut(s) 349, 939
Lsp1109I GCAGC 5 cut(s) 217, 1022, 1072, 1087, 1115
LweI GCATC 4 cut(s) 168, 350, 676, 1158
MaeI CTAG 3 cut(s) 384, 728, 797
MaeII ACGT 3 cut(s) 177, 486, 1185
MaeIII GTNAC 2 cut(s) 631, 799
MalI GATC 7 cut(s) 288, 312, 504, 552, 628, 726, 1129
MboI GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
MboII GAAGA 4 cut(s) 114, 437, 479, 860
MflI RGATCY 3 cut(s) 286, 550, 1127
MhlI GDGCHC 1 cut(s) 936
MluCI AATT 5 cut(s) 235, 410, 591, 804, 860
Mly113I GGCGCC 1 cut(s) 106
MlyI GAGTC 3 cut(s) 93, 431, 830
MmeI TCCRAC 1 cut(s) 160
MroI TCCGGA 1 cut(s) 283
MroNI GCCGGC 1 cut(s) 155
MroXI GAANNNNTTC 2 cut(s) 410, 1043
MseI TTAA 4 cut(s) 95, 638, 1124, 1182
MslI CAYNNNNRTG 1 cut(s) 489
MspA1I CMGCKG 1 cut(s) 1013
MspI CCGG 3 cut(s) 156, 284, 338
MspR9I CCNGG 3 cut(s) 338, 560, 738
MvaI CCWGG 2 cut(s) 560, 738
MvnI CGCG 2 cut(s) 330, 429
MwoI GCNNNNNNNGC 4 cut(s) 165, 230, 713, 1007
NaeI GCCGGC 1 cut(s) 157
NarI GGCGCC 1 cut(s) 106
NciI CCSGG 1 cut(s) 338
NdeI CATATG 1 cut(s) 919
NdeII GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
NgoMIV GCCGGC 1 cut(s) 155
NlaIII CATG 5 cut(s) 82, 145, 610, 755, 978
NlaIV GGNNCC 4 cut(s) 65, 107, 288, 935
NmuCI GTSAC 1 cut(s) 631
NruI TCGCGA 1 cut(s) 429
PdiI GCCGGC 1 cut(s) 157
PdmI GAANNNNTTC 2 cut(s) 410, 1043
PfeI GAWTC 7 cut(s) 566, 644, 656, 719, 745, 769, 869
PflFI GACNNNGTC 1 cut(s) 1063
PkrI GCNGC 6 cut(s) 110, 232, 1012, 1087, 1102, 1105
PleI GAGTC 3 cut(s) 92, 431, 829
PluTI GGCGCC 1 cut(s) 109
PmaCI CACGTG 1 cut(s) 487
PmlI CACGTG 1 cut(s) 487
PpsI GAGTC 3 cut(s) 92, 431, 829
Ppu21I YACGTR 1 cut(s) 487
Psp6I CCWGG 2 cut(s) 558, 736
PspCI CACGTG 1 cut(s) 487
PspFI CCCAGC 1 cut(s) 1013
PspGI CCWGG 2 cut(s) 558, 736
PspN4I GGNNCC 4 cut(s) 65, 107, 288, 935
PspPI GGNCC 2 cut(s) 556, 978
PstI CTGCAG 1 cut(s) 1105
PsuI RGATCY 3 cut(s) 286, 550, 1127
PsyI GACNNNGTC 1 cut(s) 1063
PvuII CAGCTG 1 cut(s) 1013
RruI TCGCGA 1 cut(s) 429
RsaI GTAC 4 cut(s) 250, 303, 940, 1152
RsaNI GTAC 4 cut(s) 249, 302, 939, 1151
RseI CAYNNNNRTG 1 cut(s) 489
SaqAI TTAA 4 cut(s) 95, 638, 1124, 1182
SatI GCNGC 6 cut(s) 109, 231, 1011, 1086, 1101, 1104
Sau3AI GATC 7 cut(s) 286, 310, 502, 550, 626, 724, 1127
Sau96I GGNCC 2 cut(s) 556, 978
SchI GAGTC 3 cut(s) 93, 431, 830
ScrFI CCNGG 3 cut(s) 338, 560, 738
SduI GDGCHC 1 cut(s) 936
SfaNI GCATC 4 cut(s) 168, 350, 676, 1158
SfcI CTRYAG 1 cut(s) 1101
SfoI GGCGCC 1 cut(s) 107
SinI GGWCC 2 cut(s) 556, 978
SmiMI CAYNNNNRTG 1 cut(s) 489
SmlI CTYRAG 2 cut(s) 225, 1005
SmoI CTYRAG 2 cut(s) 225, 1005
SpeI ACTAGT 1 cut(s) 796
Sse9I AATT 5 cut(s) 235, 410, 591, 804, 860
SsiI CCGC 1 cut(s) 109
SspDI GGCGCC 1 cut(s) 105
SspI AATATT 1 cut(s) 424
SspMI CTAG 3 cut(s) 384, 728, 797
StyD4I CCNGG 3 cut(s) 336, 558, 736
TaaI ACNGT 1 cut(s) 1063
TaiI ACGT 3 cut(s) 180, 489, 1188
TaqI TCGA 3 cut(s) 7, 457, 1051
TasI AATT 5 cut(s) 235, 410, 591, 804, 860
TatI WGTACW 1 cut(s) 301
TauI GCSGC 1 cut(s) 111
TfiI GAWTC 7 cut(s) 566, 644, 656, 719, 745, 769, 869
Tru1I TTAA 4 cut(s) 95, 638, 1124, 1182
Tru9I TTAA 4 cut(s) 95, 638, 1124, 1182
TscAI CASTG 1 cut(s) 1068
TseFI GTSAC 1 cut(s) 631
TseI GCWGC 5 cut(s) 230, 1010, 1085, 1100, 1103
Tsp45I GTSAC 1 cut(s) 631
TspDTI ATGAA 5 cut(s) 68, 669, 701, 782, 1036
TspGWI ACGGA 2 cut(s) 231, 926
TspRI CASTG 1 cut(s) 1068
Tth111I GACNNNGTC 1 cut(s) 1063
VpaK11BI GGWCC 2 cut(s) 556, 978
XagI CCTNNNNNAGG 1 cut(s) 374
XapI RAATTY 3 cut(s) 410, 591, 860
XmnI GAANNNNTTC 2 cut(s) 410, 1043
XspI CTAG 3 cut(s) 384, 728, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.