Rh5DG449100

Belongs to the DHHC palmitoyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
71656825 .. 71665676
8852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG449100.1

Sequence Viewer

Length: 525 bp
ATGCTTGAAACACAGAAGCAGAGCAATCCCTTAAGTCGGTCCAAGCTAATTGGCCGTTGCATAGTGTCGTGTATCTTCGTCTTCCTCACTCACTTGGCCCTCTTTGTGATCCCTCGCTTCTTCTCCGCCTTCTCCTTTCTAACCCAACTAGCTCTCTCGGTTGTGCTGCTTCTGGTGCTCGTCGGTTTTGGCGGATGGTGTAGAAGAACGCTTCTTAGAGCAAAAGCTTCGGTTCCGGCTTTCGTCTTCTTCAACATTCTCTTCATGTGGGGATATTACTTCTCTGTTTTTCGACCACGGATTCTGACAAGACAATTTACGAGCGTCTACATAAGGAATTTGAAGCTGCACGGACTTTACAAACTCAAGGTACTTGTTTTATCTGGTCATGATCATGATCAGTGTGATGTTGTCCACAAGCCAAAATATGGGCTTGTGAAGGAGGTATGGCACTTTGTTTTGACCCTTCTTGCCCTCCTGCTTTGGCCAGCTGGTGGTCTCCTCATTCATCAGGTGCTTGCGTAA

Protein Analysis

174

Amino Acids

19.98

Weight (kDa)

10.26

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018570)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 428, 494
AccI GTMKAC 1 cut(s) 327
AciI CCGC 2 cut(s) 126, 192
AclWI GGATC 1 cut(s) 103
AcoI YGGCCR 2 cut(s) 52, 485
AcsI RAATTY 1 cut(s) 337
AfaI GTAC 1 cut(s) 372
AfiI CCNNNNNNNGG 3 cut(s) 36, 428, 494
AflII CTTAAG 1 cut(s) 31
AgsI TTSAA 3 cut(s) 8, 253, 343
AluBI AGCT 5 cut(s) 46, 152, 227, 346, 491
AluI AGCT 5 cut(s) 46, 152, 227, 346, 491
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 503
AlwI GGATC 1 cut(s) 103
AoxI GGCC 3 cut(s) 52, 96, 485
ApeKI GCWGC 2 cut(s) 166, 346
ApoI RAATTY 1 cut(s) 337
AspS9I GGNCC 2 cut(s) 39, 97
AvaII GGWCC 1 cut(s) 39
BalI TGGCCA 1 cut(s) 487
BbsI GAAGAC 2 cut(s) 73, 238
Bbv12I GWGCWC 1 cut(s) 180
BbvI GCAGC 2 cut(s) 153, 333
BccI CCATC 1 cut(s) 189
BceAI ACGGC 1 cut(s) 39
BcgI CGANNNNNNTGC 2 cut(s) 210, 244
BclI TGATCA 2 cut(s) 391, 397
BcoDI GTCTC 1 cut(s) 503
BfaI CTAG 1 cut(s) 149
BfrI CTTAAG 1 cut(s) 31
BisI GCNGC 2 cut(s) 167, 347
BlsI GCNGC 2 cut(s) 168, 348
Bme18I GGWCC 1 cut(s) 39
BmgT120I GGNCC 2 cut(s) 39, 97
BmiI GGNNCC 1 cut(s) 234
BpiI GAAGAC 2 cut(s) 73, 238
BpuEI CTTGAG 1 cut(s) 350
BsaBI GATNNNNATC 1 cut(s) 396
BsaI GGTCTC 1 cut(s) 503
BsaJI CCNNGG 1 cut(s) 296
Bsc4I CCNNNNNNNGG 3 cut(s) 36, 428, 494
Bse8I GATNNNNATC 1 cut(s) 396
BseDI CCNNGG 1 cut(s) 296
BseGI GGATG 1 cut(s) 200
BseJI GATNNNNATC 1 cut(s) 396
BseLI CCNNNNNNNGG 3 cut(s) 36, 428, 494
BseRI GAGGAG 1 cut(s) 491
BseXI GCAGC 2 cut(s) 153, 333
BsgI GTGCAG 1 cut(s) 332
BshFI GGCC 3 cut(s) 54, 98, 487
BsiHKAI GWGCWC 1 cut(s) 180
BsiSI CCGG 1 cut(s) 236
BslI CCNNNNNNNGG 3 cut(s) 36, 428, 494
BsmAI GTCTC 1 cut(s) 503
BsnI GGCC 3 cut(s) 54, 98, 487
Bso31I GGTCTC 1 cut(s) 503
Bsp1286I GDGCHC 1 cut(s) 180
Bsp143I GATC 3 cut(s) 108, 391, 397
BspACI CCGC 2 cut(s) 126, 192
BspANI GGCC 3 cut(s) 54, 98, 487
BspHI TCATGA 2 cut(s) 388, 394
BspLI GGNNCC 1 cut(s) 234
BspPI GGATC 1 cut(s) 103
BspTI CTTAAG 1 cut(s) 31
BspTNI GGTCTC 1 cut(s) 503
BssECI CCNNGG 1 cut(s) 296
BssMI GATC 3 cut(s) 108, 391, 397
Bst6I CTCTTC 1 cut(s) 266
BstAFI CTTAAG 1 cut(s) 31
BstC8I GCNNGC 2 cut(s) 489, 519
BstDEI CTNAG 1 cut(s) 215
BstDSI CCRYGG 1 cut(s) 296
BstF5I GGATG 1 cut(s) 200
BstKTI GATC 3 cut(s) 111, 394, 400
BstMAI GTCTC 1 cut(s) 503
BstMBI GATC 3 cut(s) 108, 391, 397
BstMWI GCNNNNNNNGC 1 cut(s) 175
BstV1I GCAGC 2 cut(s) 153, 333
BstV2I GAAGAC 2 cut(s) 73, 238
BsuRI GGCC 3 cut(s) 54, 98, 487
BtgI CCRYGG 1 cut(s) 296
BtsCI GGATG 1 cut(s) 200
BtsIMutI CAGTG 1 cut(s) 407
Cac8I GCNNGC 2 cut(s) 489, 519
CciI TCATGA 2 cut(s) 388, 394
Cfr13I GGNCC 2 cut(s) 39, 97
CseI GACGC 1 cut(s) 313
Csp6I GTAC 1 cut(s) 371
CviAII CATG 3 cut(s) 265, 389, 395
CviQI GTAC 1 cut(s) 371
DdeI CTNAG 1 cut(s) 215
DpnI GATC 3 cut(s) 110, 393, 399
DpnII GATC 3 cut(s) 108, 391, 397
EaeI YGGCCR 2 cut(s) 52, 485
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
EciI GGCGGA 2 cut(s) 115, 207
Eco31I GGTCTC 1 cut(s) 503
Eco47I GGWCC 1 cut(s) 39
FaeI CATG 3 cut(s) 268, 392, 398
FaiI YATR 7 cut(s) 62, 266, 332, 390, 396, 429, 448
FatI CATG 3 cut(s) 264, 388, 394
FbaI TGATCA 2 cut(s) 391, 397
FblI GTMKAC 1 cut(s) 327
Fnu4HI GCNGC 2 cut(s) 167, 347
FokI GGATG 1 cut(s) 207
Fsp4HI GCNGC 2 cut(s) 167, 347
FspBI CTAG 1 cut(s) 149
GluI GCNGC 2 cut(s) 167, 347
HaeIII GGCC 3 cut(s) 54, 98, 487
HapII CCGG 1 cut(s) 236
HgaI GACGC 1 cut(s) 313
Hin1II CATG 3 cut(s) 268, 392, 398
HindIII AAGCTT 1 cut(s) 225
HinfI GANTC 1 cut(s) 301
HpaII CCGG 1 cut(s) 236
Hpy166II GTNNAC 2 cut(s) 328, 415
Hpy188I TCNGA 1 cut(s) 306
Hpy188III TCNNGA 2 cut(s) 389, 395
Hpy8I GTNNAC 2 cut(s) 328, 415
Hpy99I CGWCG 1 cut(s) 185
HpyAV CCTTC 3 cut(s) 139, 433, 476
HpyCH4V TGCA 2 cut(s) 60, 349
HpyF10VI GCNNNNNNNGC 1 cut(s) 175
HpyF3I CTNAG 1 cut(s) 215
Hsp92II CATG 3 cut(s) 268, 392, 398
Ksp22I TGATCA 2 cut(s) 391, 397
Kzo9I GATC 3 cut(s) 108, 391, 397
LpnPI CCDG 7 cut(s) 158, 249, 369, 477, 491, 497, 501
Lsp1109I GCAGC 2 cut(s) 153, 333
MaeI CTAG 1 cut(s) 149
MalI GATC 3 cut(s) 110, 393, 399
MboI GATC 3 cut(s) 108, 391, 397
MboII GAAGA 7 cut(s) 67, 73, 112, 216, 238, 241, 253
MhlI GDGCHC 1 cut(s) 180
MlsI TGGCCA 1 cut(s) 487
MluCI AATT 3 cut(s) 48, 314, 337
MluNI TGGCCA 1 cut(s) 487
MnlI CCTC 6 cut(s) 95, 110, 123, 436, 485, 512
Mox20I TGGCCA 1 cut(s) 487
MscI TGGCCA 1 cut(s) 487
MseI TTAA 1 cut(s) 32
MslI CAYNNNNRTG 1 cut(s) 393
Msp20I TGGCCA 1 cut(s) 487
MspA1I CMGCKG 1 cut(s) 491
MspCI CTTAAG 1 cut(s) 31
MspI CCGG 1 cut(s) 236
MwoI GCNNNNNNNGC 1 cut(s) 175
NdeII GATC 3 cut(s) 108, 391, 397
NlaIII CATG 3 cut(s) 268, 392, 398
NlaIV GGNNCC 1 cut(s) 234
PagI TCATGA 2 cut(s) 388, 394
PfeI GAWTC 1 cut(s) 301
PflMI CCANNNNNTGG 2 cut(s) 428, 494
PkrI GCNGC 2 cut(s) 168, 348
PspN4I GGNNCC 1 cut(s) 234
PspPI GGNCC 2 cut(s) 39, 97
PvuII CAGCTG 1 cut(s) 491
RsaI GTAC 1 cut(s) 372
RsaNI GTAC 1 cut(s) 371
RseI CAYNNNNRTG 1 cut(s) 393
SaqAI TTAA 1 cut(s) 32
SatI GCNGC 2 cut(s) 167, 347
Sau3AI GATC 3 cut(s) 108, 391, 397
Sau96I GGNCC 2 cut(s) 39, 97
SduI GDGCHC 1 cut(s) 180
SetI ASST 8 cut(s) 48, 154, 229, 348, 372, 447, 493, 516
SinI GGWCC 1 cut(s) 39
SmiMI CAYNNNNRTG 1 cut(s) 393
SmlI CTYRAG 2 cut(s) 31, 365
SmoI CTYRAG 2 cut(s) 31, 365
Sse9I AATT 3 cut(s) 48, 314, 337
SsiI CCGC 2 cut(s) 126, 192
SspMI CTAG 1 cut(s) 149
TaqI TCGA 1 cut(s) 292
TaqII GACCGA 1 cut(s) 27
TasI AATT 3 cut(s) 48, 314, 337
TfiI GAWTC 1 cut(s) 301
Tru1I TTAA 1 cut(s) 32
Tru9I TTAA 1 cut(s) 32
TscAI CASTG 1 cut(s) 407
TseI GCWGC 2 cut(s) 166, 346
TspDTI ATGAA 2 cut(s) 253, 497
TspGWI ACGGA 2 cut(s) 313, 366
TspRI CASTG 1 cut(s) 407
Van91I CCANNNNNTGG 2 cut(s) 428, 494
Vha464I CTTAAG 1 cut(s) 31
VpaK11BI GGWCC 1 cut(s) 39
XapI RAATTY 1 cut(s) 337
XmiI GTMKAC 1 cut(s) 327
XspI CTAG 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.