Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0014018

Physical Location & Seq

Genomic Coordinates Reverse (-)

49636136 .. 49637752

Gene Structure 1617 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG275500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGATAATTGCATATTCTCGTCAGCATTGCCCATCTGAAGCTTTGAGTTTGTATTCTAGGATGATATCGGAGGGAGTTAGACCAGATAGCTCGACCTTTACTGGTGCTATCAAGGCATGTGCAGGCATGTTGGACTTGGAAATGGGTGAGGAAGTTTGGTCCAAGGCGGCGCGTTGCGGGTACGAGGGTGACGTGTTTGTGGCGTCTTCTGTTTTGAATTTGTATGCAAAGTGTGGGAAAATGGATGAAGCAGTGGCGGTTTTCGACAAGATGCCTAGAAGGGATCTTGTTTGTTGTACGACAATGATTACGGGGTTTTTGCAGAGTGGGAGGCCAGTGGAAGCAGTTGAGGTGTATAGGAGGATGCAAAATGAGGGAATGGAGTTTGATGGGGTTGTGATGATGGGGTTAGTGCAGGCTTGTGCAAGTCTAGGGGACTTGAGGTTGGGTCTTTCAGTTCATGGGTATATGATTAGGAGAGGTATTCCAATGGATGTTATGGTTCAGACAAGTCTTGTGGATATGTATGCTAAGAGTGGACATTTCGAGCTAGCTTCTTGTGTGTTCAATAGGATGCCTTACAGGAATGCCGTTTCTTGGGGTGCTTTGATTTCTGGCTTTGCTCAAAATGGTTTTGCAGGGCACGCGCTTGAAATGGTCGTAGAGATGCAGAGTTGTGGTTTCGAGCCAGAGTCAGCGTCTCTTGTAAGCTCACTTCTAGCATGTTCACAGGTTGGACTGTTGAAATTGGGTAAATCCATTCATGGATATATTTTGAAAAGGCTTGAGATTGGTCAAGTGTGCGGTACTGCAGTCATTGACATGTATTCTAAATGTGGTTCCCTTTCGTATGCGCGTGCTCTCTTTGATCAGATGGTCTCCAGAGACTTGATCTCATGGAATGCTATGATTGCCAGCTATGGGATTCATGGGTGTGGAGAGGAAGCTCTAACACTCTTCCTCCAGATGGCAGAGACGAACTTAAAGCCTGATCATTCGACTTTTGCTTCTCTTCTATCGGCTTTCAGTCACTCTGGTCTCGTAGAAGAAGGCCTGCATTGGTTCGATGTCATGGTCGCTAAGTACAAGATCCCTCCAGGGGAGAAACATTATGCTTGTATGGTTGATCTGCTGGCTCGTTCTGGACGAGTTGAAGAGGCTAGCGAGCTAATAGCTTCTATGAACACTGAACCTGGGCTTGCTGTCTGGGTTGCCCTCCTGGCAGGTTGCCACAATCATCGGAAACTCTCCATCGGAGAAATTGCAGCAAAGAAGGTCCTCGAGTTCAATCCAGATGACTTGGGAGTTTATGCTTTGGTCTCAAATTTTTACGCCATGGCAAGGAGATGGGAAGGTGTAGCTGGTACAAAGAAGATCATGAAACAGACGGGAACGAAGAAAGTCCCAGGCTACAGTCTAGTGGAAGTGAATGGAGAGCTCCATGCTTTTCTTATGGAAGATAAGAGCCACCATCACCATGAAGATATTATGCTACTTCTGAGTAAGTTGTATCATGACATGAGAGCTATCGGATATGTCCCAAAGTCTGAGGCTCTGTTGCATAATTTTGAAGAGGCACATTCCTCAGAGCAAAGAAAATTTATCAAATTACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

538

Amino Acids

59.29

Weight (kDa)

6.21

Isoelectric Point (pI)

41.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	1 - 41	3.4e-06	PPR repeat family
PPR_2	PF13041	95 - 141	5.8e-06	PPR repeat family
PPR	PF01535	97 - 126	4.6e-06	PPR repeat
PPR_2	PF13041	296 - 343	9.3e-09	PPR repeat family
PPR	PF01535	298 - 325	1e-05	PPR repeat
E_motif	PF20431	413 - 475	2.9e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25060
fragaria_vesca	FvH4_2g18670
malus_domestica	MD05G1172600.v1.1
prunus_persica	Prupe.8G200000_v2.0.a1
pyrus_communis	pycom05g15920
rosa_chinensis	RchiOBHm_Chr6g0284231
rosa_laevigata	RLG00000012754
rosa_multiflora	Rmu_sc0002698.1_g000026 Rmu_sc0002698.1_g000027 Rmu_sc0024251.1_g000001
rosa_roxburghii	Rroxscaffold_7G00184760
rosa_rugosa	Rorug06G0162100
rosa_samantha	Rh6AG275000 Rh6BG275500 Rh6CG277200 Rh6DG269900
rosa_wichuraiana	Rw6G023660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1214
AccII	CGCG	3 cut(s)	172, 647, 856
AciI	CCGC	4 cut(s)	167, 177, 257, 804
AclWI	GGATC	2 cut(s)	291, 1084
AcsI	RAATTY	3 cut(s)	217, 1324, 1598
AcuI	CTGAAG	1 cut(s)	57
AcyI	GRCGYC	1 cut(s)	203
AfaI	GTAC	5 cut(s)	182, 298, 808, 1085, 1366
AfiI	CCNNNNNNNGG	5 cut(s)	597, 921, 967, 1099, 1341
AflIII	ACRYGT	2 cut(s)	192, 822
AgsI	TTSAA	8 cut(s)	217, 568, 653, 745, 778, 1154, 1288, 1571
AjiI	CACGTC	1 cut(s)	193
AjnI	CCWGG	4 cut(s)	1096, 1192, 1218, 1405
Alw21I	GWGCWC	2 cut(s)	862, 1440
Alw26I	GTCTC	6 cut(s)	705, 879, 883, 968, 1043, 1324
AlwI	GGATC	2 cut(s)	291, 1084
Ama87I	CYCGRG	1 cut(s)	1280
AoxI	GGCC	2 cut(s)	332, 1051
ApeKI	GCWGC	1 cut(s)	1265
ApoI	RAATTY	3 cut(s)	217, 1324, 1598
AspLEI	GCGC	3 cut(s)	172, 649, 856
AspS9I	GGNCC	2 cut(s)	159, 1276
AsuHPI	GGTGA	3 cut(s)	158, 200, 1466
AsuNHI	GCTAGC	2 cut(s)	550, 1160
AvaI	CYCGRG	1 cut(s)	1280
AvaII	GGWCC	2 cut(s)	159, 1276
BaeGI	GKGCMC	1 cut(s)	645
BaeI	ACNNNNGTAYC	4 cut(s)	172, 205, 798, 831
BanII	GRGCYC	1 cut(s)	1440
BarI	GAAGNNNNNNTAC	2 cut(s)	699, 731
BbsI	GAAGAC	1 cut(s)	198
Bbv12I	GWGCWC	2 cut(s)	862, 1440
BbvI	GCAGC	1 cut(s)	1277
BccI	CCATC	8 cut(s)	40, 383, 397, 868, 961, 1259, 1341, 1479
BceAI	ACGGC	1 cut(s)	575
BciT130I	CCWGG	4 cut(s)	1098, 1194, 1220, 1407
BclI	TGATCA	2 cut(s)	868, 991
BcoDI	GTCTC	6 cut(s)	705, 879, 883, 968, 1043, 1324
BfaI	CTAG	7 cut(s)	57, 276, 431, 551, 719, 1161, 1418
BfmI	CTRYAG	2 cut(s)	810, 1411
BfuAI	ACCTGC	1 cut(s)	1214
BglI	GCCNNNNNGGC	1 cut(s)	1220
BisI	GCNGC	2 cut(s)	168, 1266
BlsI	GCNGC	2 cut(s)	169, 1267
Bme1390I	CCNGG	4 cut(s)	1098, 1194, 1220, 1407
Bme18I	GGWCC	2 cut(s)	159, 1276
BmeT110I	CYCGRG	1 cut(s)	1280
BmgBI	CACGTC	1 cut(s)	193
BmgT120I	GGNCC	2 cut(s)	159, 1276
BmiI	GGNNCC	1 cut(s)	841
BmrFI	CCNGG	4 cut(s)	1098, 1194, 1220, 1407
BmsI	GCATC	4 cut(s)	261, 354, 564, 657
BmtI	GCTAGC	2 cut(s)	554, 1164
BpiI	GAAGAC	1 cut(s)	198
BpmI	CTGGAG	3 cut(s)	865, 947, 1080
BpuEI	CTTGAG	2 cut(s)	460, 806
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	3 cut(s)	883, 1043, 1324
BsaJI	CCNNGG	5 cut(s)	162, 1097, 1193, 1335, 1405
BsaXI	ACNNNNNCTCC	2 cut(s)	945, 975
Bsc4I	CCNNNNNNNGG	5 cut(s)	597, 921, 967, 1099, 1341
Bse1I	ACTGG	2 cut(s)	106, 335
Bse3DI	GCAATG	1 cut(s)	25
BseBI	CCWGG	4 cut(s)	1098, 1194, 1220, 1407
BseDI	CCNNGG	5 cut(s)	162, 1097, 1193, 1335, 1405
BseGI	GGATG	5 cut(s)	66, 250, 369, 499, 579
BseLI	CCNNNNNNNGG	5 cut(s)	597, 921, 967, 1099, 1341
BseMI	GCAATG	1 cut(s)	25
BseMII	CTCAG	3 cut(s)	1490, 1539, 1599
BseNI	ACTGG	2 cut(s)	106, 335
BseSI	GKGCMC	1 cut(s)	645
BseXI	GCAGC	1 cut(s)	1277
BsgI	GTGCAG	2 cut(s)	141, 434
Bsh1236I	CGCG	3 cut(s)	172, 647, 856
BshFI	GGCC	2 cut(s)	334, 1053
BsiHKAI	GWGCWC	2 cut(s)	862, 1440
BsiHKCI	CYCGRG	1 cut(s)	1280
BslFI	GGGAC	3 cut(s)	449, 1388, 1523
BslI	CCNNNNNNNGG	5 cut(s)	597, 921, 967, 1099, 1341
BsmAI	GTCTC	6 cut(s)	705, 879, 883, 968, 1043, 1324
BsmBI	CGTCTC	2 cut(s)	705, 968
BsmFI	GGGAC	3 cut(s)	449, 1388, 1523
BsmI	GAATGC	2 cut(s)	592, 907
BsnI	GGCC	2 cut(s)	334, 1053
Bso31I	GGTCTC	3 cut(s)	883, 1043, 1324
BsoBI	CYCGRG	1 cut(s)	1280
Bsp1286I	GDGCHC	3 cut(s)	645, 862, 1440
Bsp143I	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
Bsp19I	CCATGG	1 cut(s)	1335
BspACI	CCGC	4 cut(s)	167, 177, 257, 804
BspANI	GGCC	2 cut(s)	334, 1053
BspCNI	CTCAG	3 cut(s)	1491, 1540, 1598
BspFNI	CGCG	3 cut(s)	172, 647, 856
BspHI	TCATGA	2 cut(s)	1377, 1513
BspLI	GGNNCC	1 cut(s)	841
BspMAI	CTGCAG	1 cut(s)	814
BspMI	ACCTGC	1 cut(s)	1214
BspOI	GCTAGC	2 cut(s)	554, 1164
BspPI	GGATC	2 cut(s)	291, 1084
BspTNI	GGTCTC	3 cut(s)	883, 1043, 1324
BsrDI	GCAATG	1 cut(s)	25
BsrI	ACTGG	2 cut(s)	106, 335
BssECI	CCNNGG	5 cut(s)	162, 1097, 1193, 1335, 1405
BssMI	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
BssNI	GRCGYC	1 cut(s)	203
BssT1I	CCWWGG	2 cut(s)	162, 1335
Bst2UI	CCWGG	4 cut(s)	1098, 1194, 1220, 1407
Bst4CI	ACNGT	2 cut(s)	741, 1415
Bst6I	CTCTTC	4 cut(s)	962, 1017, 1149, 1566
BstACI	GRCGYC	1 cut(s)	203
BstDEI	CTNAG	5 cut(s)	531, 1080, 1499, 1548, 1585
BstDSI	CCRYGG	1 cut(s)	1335
BstF5I	GGATG	5 cut(s)	66, 250, 369, 499, 579
BstFNI	CGCG	3 cut(s)	172, 647, 856
BstHHI	GCGC	3 cut(s)	172, 649, 856
BstKTI	GATC	7 cut(s)	286, 871, 894, 994, 1092, 1129, 1377
BstMAI	GTCTC	6 cut(s)	705, 879, 883, 968, 1043, 1324
BstMBI	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
BstMWI	GCNNNNNNNGC	4 cut(s)	113, 644, 911, 1220
BstNI	CCWGG	4 cut(s)	1098, 1194, 1220, 1407
BstNSI	RCATGY	4 cut(s)	120, 130, 726, 826
BstSCI	CCNGG	4 cut(s)	1096, 1192, 1218, 1405
BstSFI	CTRYAG	2 cut(s)	810, 1411
BstSLI	GKGCMC	1 cut(s)	645
BstUI	CGCG	3 cut(s)	172, 647, 856
BstV1I	GCAGC	1 cut(s)	1277
BstV2I	GAAGAC	1 cut(s)	198
BstX2I	RGATCY	2 cut(s)	283, 1089
BstYI	RGATCY	2 cut(s)	283, 1089
BsuRI	GGCC	2 cut(s)	334, 1053
BtgI	CCRYGG	1 cut(s)	1335
BtrI	CACGTC	1 cut(s)	193
BtsCI	GGATG	5 cut(s)	66, 250, 369, 499, 579
BtsI	GCAGTG	1 cut(s)	258
BtsIMutI	CAGTG	3 cut(s)	258, 342, 1185
BveI	ACCTGC	1 cut(s)	1214
CciI	TCATGA	2 cut(s)	1377, 1513
CfoI	GCGC	3 cut(s)	172, 649, 856
Cfr13I	GGNCC	2 cut(s)	159, 1276
CseI	GACGC	2 cut(s)	192, 687
Csp6I	GTAC	5 cut(s)	181, 297, 807, 1084, 1365
CspCI	CAANNNNNGTGG	2 cut(s)	498, 533
CviQI	GTAC	5 cut(s)	181, 297, 807, 1084, 1365
DdeI	CTNAG	5 cut(s)	531, 1080, 1499, 1548, 1585
DpnI	GATC	7 cut(s)	285, 870, 893, 993, 1091, 1128, 1376
DpnII	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
Eam1104I	CTCTTC	4 cut(s)	962, 1017, 1149, 1566
EarI	CTCTTC	4 cut(s)	962, 1017, 1149, 1566
Ecl136II	GAGCTC	1 cut(s)	1438
Eco130I	CCWWGG	2 cut(s)	162, 1335
Eco147I	AGGCCT	1 cut(s)	1053
Eco24I	GRGCYC	1 cut(s)	1440
Eco31I	GGTCTC	3 cut(s)	883, 1043, 1324
Eco32I	GATATC	1 cut(s)	66
Eco47I	GGWCC	2 cut(s)	159, 1276
Eco53kI	GAGCTC	1 cut(s)	1438
Eco57I	CTGAAG	1 cut(s)	57
Eco88I	CYCGRG	1 cut(s)	1280
EcoICRI	GAGCTC	1 cut(s)	1438
EcoO109I	RGGNCCY	1 cut(s)	1276
EcoRII	CCWGG	4 cut(s)	1096, 1192, 1218, 1405
EcoRV	GATATC	1 cut(s)	66
EcoT14I	CCWWGG	2 cut(s)	162, 1335
EcoT38I	GRGCYC	1 cut(s)	1440
ErhI	CCWWGG	2 cut(s)	162, 1335
Esp3I	CGTCTC	2 cut(s)	705, 968
FaqI	GGGAC	3 cut(s)	449, 1388, 1523
FauI	CCCGC	1 cut(s)	170
FbaI	TGATCA	2 cut(s)	868, 991
Fnu4HI	GCNGC	2 cut(s)	168, 1266
FokI	GGATG	5 cut(s)	73, 257, 376, 506, 586
FriOI	GRGCYC	1 cut(s)	1440
Fsp4HI	GCNGC	2 cut(s)	168, 1266
FspBI	CTAG	7 cut(s)	57, 276, 431, 551, 719, 1161, 1418
GlaI	GCGC	3 cut(s)	171, 648, 855
GluI	GCNGC	2 cut(s)	168, 1266
GsuI	CTGGAG	3 cut(s)	865, 947, 1080
HaeIII	GGCC	2 cut(s)	334, 1053
HgaI	GACGC	2 cut(s)	192, 687
HhaI	GCGC	3 cut(s)	172, 649, 856
Hin1I	GRCGYC	1 cut(s)	203
Hin6I	GCGC	3 cut(s)	170, 647, 854
HinP1I	GCGC	3 cut(s)	170, 647, 854
HindIII	AAGCTT	1 cut(s)	39
HinfI	GANTC	2 cut(s)	692, 925
HphI	GGTGA	3 cut(s)	158, 200, 1466
Hpy166II	GTNNAC	2 cut(s)	539, 728
Hpy188III	TCNNGA	6 cut(s)	882, 964, 1143, 1292, 1378, 1514
Hpy8I	GTNNAC	2 cut(s)	539, 728
HpyAV	CCTTC	4 cut(s)	273, 1043, 1267, 1346
HpyCH4III	ACNGT	2 cut(s)	741, 1415
HpyCH4IV	ACGT	1 cut(s)	192
HpyF10VI	GCNNNNNNNGC	4 cut(s)	113, 644, 911, 1220
HpyF3I	CTNAG	5 cut(s)	531, 1080, 1499, 1548, 1585
HpySE526I	ACGT	1 cut(s)	192
Hsp92I	GRCGYC	1 cut(s)	203
HspAI	GCGC	3 cut(s)	170, 647, 854
Ksp22I	TGATCA	2 cut(s)	868, 991
Kzo9I	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
LmnI	GCTCC	1 cut(s)	1443
Lsp1109I	GCAGC	1 cut(s)	1277
LweI	GCATC	4 cut(s)	261, 354, 564, 657
MaeI	CTAG	7 cut(s)	57, 276, 431, 551, 719, 1161, 1418
MaeII	ACGT	1 cut(s)	192
MaeIII	GTNAC	2 cut(s)	188, 1028
MalI	GATC	7 cut(s)	285, 870, 893, 993, 1091, 1128, 1376
MboI	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
MflI	RGATCY	2 cut(s)	283, 1089
MhlI	GDGCHC	3 cut(s)	645, 862, 1440
MluCI	AATT	8 cut(s)	6, 217, 746, 1260, 1324, 1564, 1598, 1607
MlyI	GAGTC	1 cut(s)	701
MmeI	TCCRAC	2 cut(s)	111, 715
MseI	TTAA	2 cut(s)	983, 1615
MslI	CAYNNNNRTG	3 cut(s)	821, 933, 1476
MspR9I	CCNGG	4 cut(s)	1098, 1194, 1220, 1407
Mva1269I	GAATGC	2 cut(s)	592, 907
MvaI	CCWGG	4 cut(s)	1098, 1194, 1220, 1407
MvnI	CGCG	3 cut(s)	172, 647, 856
MwoI	GCNNNNNNNGC	4 cut(s)	113, 644, 911, 1220
NcoI	CCATGG	1 cut(s)	1335
NdeII	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
NheI	GCTAGC	2 cut(s)	550, 1160
NlaIV	GGNNCC	1 cut(s)	841
NmuCI	GTSAC	2 cut(s)	188, 1028
NspI	RCATGY	4 cut(s)	120, 130, 726, 826
PaeR7I	CTCGAG	1 cut(s)	1280
PagI	TCATGA	2 cut(s)	1377, 1513
PceI	AGGCCT	1 cut(s)	1053
PciI	ACATGT	1 cut(s)	822
PcsI	WCGNNNNNNNCGW	2 cut(s)	189, 1144
PctI	GAATGC	2 cut(s)	592, 907
PfeI	GAWTC	1 cut(s)	925
PkrI	GCNGC	2 cut(s)	169, 1267
PleI	GAGTC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	700
PpuMI	RGGWCCY	1 cut(s)	1276
PscI	ACATGT	1 cut(s)	822
Psp124BI	GAGCTC	1 cut(s)	1440
Psp5II	RGGWCCY	1 cut(s)	1276
Psp6I	CCWGG	4 cut(s)	1096, 1192, 1218, 1405
PspGI	CCWGG	4 cut(s)	1096, 1192, 1218, 1405
PspN4I	GGNNCC	1 cut(s)	841
PspPI	GGNCC	2 cut(s)	159, 1276
PspPPI	RGGWCCY	1 cut(s)	1276
PspXI	VCTCGAGB	1 cut(s)	1280
PstI	CTGCAG	1 cut(s)	814
PsuI	RGATCY	2 cut(s)	283, 1089
RsaI	GTAC	5 cut(s)	182, 298, 808, 1085, 1366
RsaNI	GTAC	5 cut(s)	181, 297, 807, 1084, 1365
RseI	CAYNNNNRTG	3 cut(s)	821, 933, 1476
SacI	GAGCTC	1 cut(s)	1440
SaqAI	TTAA	2 cut(s)	983, 1615
SatI	GCNGC	2 cut(s)	168, 1266
Sau3AI	GATC	7 cut(s)	283, 868, 891, 991, 1089, 1126, 1374
Sau96I	GGNCC	2 cut(s)	159, 1276
SchI	GAGTC	1 cut(s)	701
ScrFI	CCNGG	4 cut(s)	1098, 1194, 1220, 1407
SduI	GDGCHC	3 cut(s)	645, 862, 1440
SfaNI	GCATC	4 cut(s)	261, 354, 564, 657
SfcI	CTRYAG	2 cut(s)	810, 1411
Sfr274I	CTCGAG	1 cut(s)	1280
SinI	GGWCC	2 cut(s)	159, 1276
SlaI	CTCGAG	1 cut(s)	1280
SmiMI	CAYNNNNRTG	3 cut(s)	821, 933, 1476
SmlI	CTYRAG	3 cut(s)	439, 785, 1280
SmoI	CTYRAG	3 cut(s)	439, 785, 1280
Sse9I	AATT	8 cut(s)	6, 217, 746, 1260, 1324, 1564, 1598, 1607
SseBI	AGGCCT	1 cut(s)	1053
SsiI	CCGC	4 cut(s)	167, 177, 257, 804
SspMI	CTAG	7 cut(s)	57, 276, 431, 551, 719, 1161, 1418
SstI	GAGCTC	1 cut(s)	1440
StuI	AGGCCT	1 cut(s)	1053
StyD4I	CCNGG	4 cut(s)	1096, 1192, 1218, 1405
StyI	CCWWGG	2 cut(s)	162, 1335
TaaI	ACNGT	2 cut(s)	741, 1415
TaiI	ACGT	1 cut(s)	195
TaqI	TCGA	7 cut(s)	92, 264, 546, 684, 998, 1065, 1281
TasI	AATT	8 cut(s)	6, 217, 746, 1260, 1324, 1564, 1598, 1607
TatI	WGTACW	1 cut(s)	1083
TauI	GCSGC	1 cut(s)	170
TfiI	GAWTC	1 cut(s)	925
Tru1I	TTAA	2 cut(s)	983, 1615
Tru9I	TTAA	2 cut(s)	983, 1615
TscAI	CASTG	3 cut(s)	258, 342, 1192
TseFI	GTSAC	2 cut(s)	188, 1028
TseI	GCWGC	1 cut(s)	1265
Tsp45I	GTSAC	2 cut(s)	188, 1028
TspDTI	ATGAA	7 cut(s)	261, 449, 752, 917, 1196, 1394, 1494
TspRI	CASTG	3 cut(s)	258, 342, 1192
VpaK11BI	GGWCC	2 cut(s)	159, 1276
XapI	RAATTY	3 cut(s)	217, 1324, 1598
XceI	RCATGY	4 cut(s)	120, 130, 726, 826
XhoI	CTCGAG	1 cut(s)	1280
XspI	CTAG	7 cut(s)	57, 276, 431, 551, 719, 1161, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.