U3 small nucleolar RNA-associated protein 6 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0291751 |
| rosa_laevigata | RLG00000012087 |
| rosa_roxburghii | Rroxscaffold_7G00175780 |
| rosa_rugosa | Rorug06G0221400 |
| rosa_samantha | Rh6AG334000 Rh6BG341100 Rh6CG347200 Rh6DG334400 Rh6DG334500 |
| rosa_wichuraiana | Rw6G029080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 322 |
| AfaI | GTAC | 1 cut(s) | 106 |
| AgsI | TTSAA | 2 cut(s) | 281, 449 |
| AleI | CACNNNNGTG | 1 cut(s) | 114 |
| AluBI | AGCT | 2 cut(s) | 65, 293 |
| AluI | AGCT | 2 cut(s) | 65, 293 |
| Alw26I | GTCTC | 3 cut(s) | 132, 243, 396 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 68, 203 |
| ApeKI | GCWGC | 2 cut(s) | 65, 68 |
| BbvI | GCAGC | 2 cut(s) | 52, 55 |
| BccI | CCATC | 2 cut(s) | 40, 514 |
| BcoDI | GTCTC | 3 cut(s) | 132, 243, 396 |
| BfaI | CTAG | 1 cut(s) | 303 |
| BglII | AGATCT | 1 cut(s) | 333 |
| BisI | GCNGC | 3 cut(s) | 66, 69, 323 |
| BlsI | GCNGC | 3 cut(s) | 67, 70, 324 |
| BmsI | GCATC | 1 cut(s) | 190 |
| BpuEI | CTTGAG | 1 cut(s) | 225 |
| BsaAI | YACGTR | 1 cut(s) | 374 |
| Bse1I | ACTGG | 1 cut(s) | 437 |
| BseGI | GGATG | 1 cut(s) | 103 |
| BseMII | CTCAG | 3 cut(s) | 38, 305, 512 |
| BseNI | ACTGG | 1 cut(s) | 437 |
| BseXI | GCAGC | 2 cut(s) | 52, 55 |
| BslFI | GGGAC | 1 cut(s) | 443 |
| BsmAI | GTCTC | 3 cut(s) | 132, 243, 396 |
| BsmBI | CGTCTC | 1 cut(s) | 132 |
| BsmFI | GGGAC | 1 cut(s) | 443 |
| Bsp143I | GATC | 1 cut(s) | 333 |
| BspACI | CCGC | 1 cut(s) | 322 |
| BspCNI | CTCAG | 3 cut(s) | 37, 306, 511 |
| BspQI | GCTCTTC | 2 cut(s) | 93, 300 |
| BsrI | ACTGG | 1 cut(s) | 437 |
| BssMI | GATC | 1 cut(s) | 333 |
| Bst4CI | ACNGT | 4 cut(s) | 104, 132, 188, 229 |
| Bst6I | CTCTTC | 2 cut(s) | 93, 300 |
| BstBAI | YACGTR | 1 cut(s) | 374 |
| BstC8I | GCNNGC | 2 cut(s) | 438, 463 |
| BstDEI | CTNAG | 3 cut(s) | 24, 314, 498 |
| BstF5I | GGATG | 1 cut(s) | 103 |
| BstKTI | GATC | 1 cut(s) | 336 |
| BstMAI | GTCTC | 3 cut(s) | 132, 243, 396 |
| BstMBI | GATC | 1 cut(s) | 333 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 290 |
| BstSNI | TACGTA | 1 cut(s) | 374 |
| BstV1I | GCAGC | 2 cut(s) | 52, 55 |
| BstX2I | RGATCY | 1 cut(s) | 333 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 426 |
| BstYI | RGATCY | 1 cut(s) | 333 |
| BtsCI | GGATG | 1 cut(s) | 103 |
| BtsIMutI | CAGTG | 2 cut(s) | 137, 193 |
| Cac8I | GCNNGC | 2 cut(s) | 438, 463 |
| CaiI | CAGNNNCTG | 2 cut(s) | 68, 203 |
| Csp6I | GTAC | 1 cut(s) | 105 |
| CviAII | CATG | 1 cut(s) | 394 |
| CviJI | RGCY | 4 cut(s) | 65, 293, 325, 436 |
| CviKI_1 | RGCY | 4 cut(s) | 65, 293, 325, 436 |
| CviQI | GTAC | 1 cut(s) | 105 |
| DdeI | CTNAG | 3 cut(s) | 24, 314, 498 |
| DpnI | GATC | 1 cut(s) | 335 |
| DpnII | GATC | 1 cut(s) | 333 |
| Eam1104I | CTCTTC | 2 cut(s) | 93, 300 |
| EarI | CTCTTC | 2 cut(s) | 93, 300 |
| Eco105I | TACGTA | 1 cut(s) | 374 |
| Esp3I | CGTCTC | 1 cut(s) | 132 |
| FaeI | CATG | 1 cut(s) | 397 |
| FaiI | YATR | 5 cut(s) | 157, 260, 272, 274, 395 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 389, 421 |
| FaqI | GGGAC | 1 cut(s) | 443 |
| FatI | CATG | 1 cut(s) | 393 |
| Fnu4HI | GCNGC | 3 cut(s) | 66, 69, 323 |
| FokI | GGATG | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 3 cut(s) | 66, 69, 323 |
| FspBI | CTAG | 1 cut(s) | 303 |
| GluI | GCNGC | 3 cut(s) | 66, 69, 323 |
| Hin1II | CATG | 1 cut(s) | 397 |
| Hpy188I | TCNGA | 6 cut(s) | 27, 45, 199, 315, 364, 519 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 173, 242, 543 |
| HpyAV | CCTTC | 1 cut(s) | 185 |
| HpyCH4III | ACNGT | 4 cut(s) | 104, 132, 188, 229 |
| HpyCH4IV | ACGT | 1 cut(s) | 373 |
| HpyCH4V | TGCA | 2 cut(s) | 440, 461 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 290 |
| HpyF3I | CTNAG | 3 cut(s) | 24, 314, 498 |
| HpySE526I | ACGT | 1 cut(s) | 373 |
| Hsp92II | CATG | 1 cut(s) | 397 |
| Kzo9I | GATC | 1 cut(s) | 333 |
| LguI | GCTCTTC | 2 cut(s) | 93, 300 |
| LmnI | GCTCC | 1 cut(s) | 168 |
| LpnPI | CCDG | 5 cut(s) | 418, 432, 455, 471, 485 |
| Lsp1109I | GCAGC | 2 cut(s) | 52, 55 |
| LweI | GCATC | 1 cut(s) | 190 |
| MaeI | CTAG | 1 cut(s) | 303 |
| MaeII | ACGT | 1 cut(s) | 373 |
| MalI | GATC | 1 cut(s) | 335 |
| MboI | GATC | 1 cut(s) | 333 |
| MboII | GAAGA | 4 cut(s) | 20, 80, 287, 377 |
| MflI | RGATCY | 1 cut(s) | 333 |
| MluCI | AATT | 1 cut(s) | 358 |
| MnlI | CCTC | 3 cut(s) | 88, 310, 475 |
| MseI | TTAA | 6 cut(s) | 168, 231, 254, 263, 288, 357 |
| MslI | CAYNNNNRTG | 1 cut(s) | 114 |
| MspA1I | CMGCKG | 1 cut(s) | 65 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 290 |
| NdeII | GATC | 1 cut(s) | 333 |
| NlaIII | CATG | 1 cut(s) | 397 |
| OliI | CACNNNNGTG | 1 cut(s) | 114 |
| PciSI | GCTCTTC | 2 cut(s) | 93, 300 |
| PkrI | GCNGC | 3 cut(s) | 67, 70, 324 |
| Ppu21I | YACGTR | 1 cut(s) | 374 |
| PstNI | CAGNNNCTG | 2 cut(s) | 68, 203 |
| PsuI | RGATCY | 1 cut(s) | 333 |
| PvuII | CAGCTG | 1 cut(s) | 65 |
| RsaI | GTAC | 1 cut(s) | 106 |
| RsaNI | GTAC | 1 cut(s) | 105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 114 |
| SapI | GCTCTTC | 2 cut(s) | 93, 300 |
| SaqAI | TTAA | 6 cut(s) | 168, 231, 254, 263, 288, 357 |
| SatI | GCNGC | 3 cut(s) | 66, 69, 323 |
| Sau3AI | GATC | 1 cut(s) | 333 |
| SetI | ASST | 6 cut(s) | 67, 84, 253, 295, 376, 504 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 114 |
| SmlI | CTYRAG | 1 cut(s) | 240 |
| SmoI | CTYRAG | 1 cut(s) | 240 |
| SnaBI | TACGTA | 1 cut(s) | 374 |
| Sse9I | AATT | 1 cut(s) | 358 |
| SsiI | CCGC | 1 cut(s) | 322 |
| SspMI | CTAG | 1 cut(s) | 303 |
| TaaI | ACNGT | 4 cut(s) | 104, 132, 188, 229 |
| TaiI | ACGT | 1 cut(s) | 376 |
| TaqI | TCGA | 1 cut(s) | 91 |
| TasI | AATT | 1 cut(s) | 358 |
| TauI | GCSGC | 1 cut(s) | 325 |
| Tru1I | TTAA | 6 cut(s) | 168, 231, 254, 263, 288, 357 |
| Tru9I | TTAA | 6 cut(s) | 168, 231, 254, 263, 288, 357 |
| TscAI | CASTG | 2 cut(s) | 137, 193 |
| TseI | GCWGC | 2 cut(s) | 65, 68 |
| TspDTI | ATGAA | 1 cut(s) | 410 |
| TspRI | CASTG | 2 cut(s) | 137, 193 |
| XspI | CTAG | 1 cut(s) | 303 |