U3 small nucleolar RNA-associated protein 6 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0291751 |
| rosa_laevigata | RLG00000012087 |
| rosa_roxburghii | Rroxscaffold_7G00175780 |
| rosa_rugosa | Rorug06G0221400 |
| rosa_samantha | Rh6AG334000 Rh6BG341100 Rh6CG347200 Rh6DG334400 Rh6DG334500 |
| rosa_wichuraiana | Rw6G029080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 337 |
| AcuI | CTGAAG | 1 cut(s) | 15 |
| AfaI | GTAC | 1 cut(s) | 121 |
| AgsI | TTSAA | 2 cut(s) | 257, 296 |
| AleI | CACNNNNGTG | 1 cut(s) | 129 |
| AluBI | AGCT | 1 cut(s) | 308 |
| AluI | AGCT | 1 cut(s) | 308 |
| Alw26I | GTCTC | 1 cut(s) | 147 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 218 |
| AsuII | TTCGAA | 1 cut(s) | 58 |
| BcoDI | GTCTC | 1 cut(s) | 147 |
| BfaI | CTAG | 1 cut(s) | 318 |
| BglII | AGATCT | 2 cut(s) | 37, 348 |
| BisI | GCNGC | 1 cut(s) | 338 |
| BlsI | GCNGC | 1 cut(s) | 339 |
| BmsI | GCATC | 1 cut(s) | 205 |
| Bpu14I | TTCGAA | 1 cut(s) | 58 |
| BsaAI | YACGTR | 1 cut(s) | 389 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 320 |
| BsmAI | GTCTC | 1 cut(s) | 147 |
| Bsp119I | TTCGAA | 1 cut(s) | 58 |
| Bsp143I | GATC | 2 cut(s) | 37, 348 |
| BspACI | CCGC | 1 cut(s) | 337 |
| BspCNI | CTCAG | 1 cut(s) | 321 |
| BspQI | GCTCTTC | 2 cut(s) | 108, 315 |
| BspT104I | TTCGAA | 1 cut(s) | 58 |
| BssMI | GATC | 2 cut(s) | 37, 348 |
| Bst4CI | ACNGT | 4 cut(s) | 119, 147, 203, 244 |
| Bst6I | CTCTTC | 2 cut(s) | 108, 315 |
| BstBAI | YACGTR | 1 cut(s) | 389 |
| BstBI | TTCGAA | 1 cut(s) | 58 |
| BstDEI | CTNAG | 1 cut(s) | 329 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstKTI | GATC | 2 cut(s) | 40, 351 |
| BstMAI | GTCTC | 1 cut(s) | 147 |
| BstMBI | GATC | 2 cut(s) | 37, 348 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 305 |
| BstSNI | TACGTA | 1 cut(s) | 389 |
| BstX2I | RGATCY | 2 cut(s) | 37, 348 |
| BstYI | RGATCY | 2 cut(s) | 37, 348 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 2 cut(s) | 152, 208 |
| CaiI | CAGNNNCTG | 1 cut(s) | 218 |
| Csp6I | GTAC | 1 cut(s) | 120 |
| CviJI | RGCY | 2 cut(s) | 308, 340 |
| CviKI_1 | RGCY | 2 cut(s) | 308, 340 |
| CviQI | GTAC | 1 cut(s) | 120 |
| DdeI | CTNAG | 1 cut(s) | 329 |
| DpnI | GATC | 2 cut(s) | 39, 350 |
| DpnII | GATC | 2 cut(s) | 37, 348 |
| Eam1104I | CTCTTC | 2 cut(s) | 108, 315 |
| EarI | CTCTTC | 2 cut(s) | 108, 315 |
| Eco105I | TACGTA | 1 cut(s) | 389 |
| Eco57I | CTGAAG | 1 cut(s) | 15 |
| FaiI | YATR | 4 cut(s) | 172, 275, 287, 289 |
| Fnu4HI | GCNGC | 1 cut(s) | 338 |
| FokI | GGATG | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 338 |
| FspBI | CTAG | 1 cut(s) | 318 |
| GluI | GCNGC | 1 cut(s) | 338 |
| HinfI | GANTC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 4 cut(s) | 34, 214, 330, 379 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 257 |
| HpyAV | CCTTC | 1 cut(s) | 200 |
| HpyCH4III | ACNGT | 4 cut(s) | 119, 147, 203, 244 |
| HpyCH4IV | ACGT | 1 cut(s) | 388 |
| HpyCH4V | TGCA | 1 cut(s) | 24 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 305 |
| HpyF3I | CTNAG | 1 cut(s) | 329 |
| HpySE526I | ACGT | 1 cut(s) | 388 |
| Kzo9I | GATC | 2 cut(s) | 37, 348 |
| LguI | GCTCTTC | 2 cut(s) | 108, 315 |
| LmnI | GCTCC | 1 cut(s) | 183 |
| LweI | GCATC | 1 cut(s) | 205 |
| MaeI | CTAG | 1 cut(s) | 318 |
| MaeII | ACGT | 1 cut(s) | 388 |
| MalI | GATC | 2 cut(s) | 39, 350 |
| MboI | GATC | 2 cut(s) | 37, 348 |
| MboII | GAAGA | 5 cut(s) | 47, 47, 95, 302, 392 |
| MflI | RGATCY | 2 cut(s) | 37, 348 |
| MluCI | AATT | 2 cut(s) | 373, 403 |
| MlyI | GAGTC | 1 cut(s) | 82 |
| MnlI | CCTC | 2 cut(s) | 103, 325 |
| MseI | TTAA | 6 cut(s) | 183, 249, 269, 278, 303, 372 |
| MslI | CAYNNNNRTG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 305 |
| NdeII | GATC | 2 cut(s) | 37, 348 |
| NspV | TTCGAA | 1 cut(s) | 58 |
| OliI | CACNNNNGTG | 1 cut(s) | 129 |
| PciSI | GCTCTTC | 2 cut(s) | 108, 315 |
| PkrI | GCNGC | 1 cut(s) | 339 |
| PleI | GAGTC | 1 cut(s) | 82 |
| PpsI | GAGTC | 1 cut(s) | 82 |
| Ppu21I | YACGTR | 1 cut(s) | 389 |
| PstNI | CAGNNNCTG | 1 cut(s) | 218 |
| PsuI | RGATCY | 2 cut(s) | 37, 348 |
| RsaI | GTAC | 1 cut(s) | 121 |
| RsaNI | GTAC | 1 cut(s) | 120 |
| RseI | CAYNNNNRTG | 1 cut(s) | 129 |
| SapI | GCTCTTC | 2 cut(s) | 108, 315 |
| SaqAI | TTAA | 6 cut(s) | 183, 249, 269, 278, 303, 372 |
| SatI | GCNGC | 1 cut(s) | 338 |
| Sau3AI | GATC | 2 cut(s) | 37, 348 |
| SchI | GAGTC | 1 cut(s) | 82 |
| SetI | ASST | 4 cut(s) | 99, 268, 310, 391 |
| SfaNI | GCATC | 1 cut(s) | 205 |
| SfuI | TTCGAA | 1 cut(s) | 58 |
| SgeI | CNNG | 8 cut(s) | 119, 141, 187, 200, 269, 275, 330, 364 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 129 |
| SnaBI | TACGTA | 1 cut(s) | 389 |
| Sse9I | AATT | 2 cut(s) | 373, 403 |
| SsiI | CCGC | 1 cut(s) | 337 |
| SspMI | CTAG | 1 cut(s) | 318 |
| TaaI | ACNGT | 4 cut(s) | 119, 147, 203, 244 |
| TaiI | ACGT | 1 cut(s) | 391 |
| TaqI | TCGA | 2 cut(s) | 58, 106 |
| TasI | AATT | 2 cut(s) | 373, 403 |
| TauI | GCSGC | 1 cut(s) | 340 |
| Tru1I | TTAA | 6 cut(s) | 183, 249, 269, 278, 303, 372 |
| Tru9I | TTAA | 6 cut(s) | 183, 249, 269, 278, 303, 372 |
| TscAI | CASTG | 2 cut(s) | 152, 208 |
| TspDTI | ATGAA | 1 cut(s) | 20 |
| TspRI | CASTG | 2 cut(s) | 152, 208 |
| XspI | CTAG | 1 cut(s) | 318 |