Rh6CG487000

CYPRO4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0014939
Physical Location & Seq
Reverse (-)
65520696 .. 65523475
2780 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG487000.1

Sequence Viewer

Length: 1920 bp
ATGGGTGGGGCTCACAGCCGCGAAGATCTTGAGCTTATAGACTCAGACGAAGAAGAGCAACAAAGCGAAGGGGAAGAGAACTTCCAGGACGCCGAGGAAAAGATTCAGAGATCGGCGGAGCGCGGACCCAGAACGCCGGCGTCGGTGGATGACGTGGAGGCCAAGCTCAAGGCTTTGAAGCTCAAGTACGCGTCGACGTCGCAGGCCCCAAATCTGAAAAATGCGGTGAAGCTGTATGTTCATGTTGGAGGGAACACCCCCAAAGCGAAGTGGGTAACCTCTGAAAAACTCACCTCTTACTCTTTTTGTAAGACCTGTAGAATGGAAGTGGATGATGATGAGGAAGATGTTGAGGAGGAAGATGAGGATGAGGAGAGGGAAGATTCGTGGTGGATTTTGAGGGTGGGTTCGAAGATTAGGGTTAAAGTTTCGGCTGAGATGCAAATGAAGACGTTTGGGAGGGAGCGTCGGGTTGATTTTGTGGCCCGGGGAGTCTGGGCTATGAAGTTCTTTAGTGTGGAGGATTATAGGGTTTTCGTTGCTAAGTATACTGATTGTATGTTTGAGAACACTTATGGATATGAGGCAACGGAGCAGAACAGGGTTAAGGTGTATGGGAAGGATTTTATTGGGTGGGCAAAGCCAGAAGCAGCGGATGATTCTGTTTGGGAGGATGCTGAGGAGAGTTTACTGAGAAGCCCGGGCTCTGCAACCCCGGTGAGAGCGAATCAGGACTTGAGGGAGGAGTTTGAGGAAGCGGCACATGGAGGTATACAGAGCTTGGCATTGGGTGCATTGGACAATAGTTTCTTGGTGGGAGACTCTGGCATTCAGGTTGTTAAGAATTACAGTCATGGAATACAGGGGAAAGGTGTTTATGTCAATTTTGATGATGGGAGTTATAGAGGTGGCTCAAATTTGGCACGCTCCACGCCTAGGAAGGCTCTGCTGATGAAGGCTGAAACCAATATGCTGCTCATGAGTCCAATGAATGAGGGCAAGCCTCATACAACAGGGCTTCATCAGTTTGACATTGAAACTGGAAAGGTTGTGACTGAGTGGAAGTTCGAAAAGGATGGGACTGATATTACAATGAAGGATATCGCAAATGACAGCAAGGGAGCACAGTTGGATCCTTCAGGGTCCACATTCTTGGGACTGGATGATAACAGGCTTTGCCGTTGGGATATGCGTGATAGGAAAGGGATGGTTCAGGATCTTGCAAGTGCTAATACTCCTATTCTCAATTGGAACCAAGGGCATCAGTTCTCCAGAGGAACTAACTTCCAGTGCTTTGCTAGTACTGGTGATGGCTCAATTGTTGTGGGGTCTCTTGATGGGAAGATCCGGCTGTATTCAATCAATTCTATGAGGCAAGCCAAAACAGCTTTTCCTGGCCTTGGTTCTCCTATTACGCATGTGGATGTTACGTACGATGGAAAGTGGATCCTGGGAACAACTGACACCTATTTGATCCTCATCTGTACCATGTTTACTGATAAGGATGGGAAGACAAAGACAGGCTTTGCTGGGCGTATGGGGAATAGGATCTCCGCTCCAAGGTTGTTGAAGCTGAATCCTCTGGATTCTCACTTGGCAGGCACTAATAACAAGTTTCGTAATGCCCAGTTTTCATGGGTCACAGAGAATGGGAAGCAGGAGCGCCATTTGGTTGCAACTGTTGGAAAGTTTAGTGTGATTTGGAATTTCCAACAGGTGAAGGACGGGTCACATGAGTGCTACCTAAATCAGGAGGGCTTGAAGAGCTGTTATTGCTATAAGATAGTCCTGAAGGATGATTCCATTGTTGATAGTCGCTTCATGCACGACAAATTTGCAGTCACCGACTCACCTGAAGCCCCACTTGTGATTGCAACGCCATTGAAAGTCAGCTCCTTCAGCATATCCAGTAGGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VID27

Protein Analysis

639

Amino Acids

71.56

Weight (kDa)

5.42

Isoelectric Point (pI)

30.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7135 PF23581 39 - 206 2.1e-77 Domain of unknown function (DUF7135)
VID27 PF08553 267 - 582 2.7e-43 VID27 C-terminal WD40-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014939)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G33400
fragaria_vesca FvH4_2g34470
malus_domestica MD08G1101800.v1.1 MD15G1083300.v1.1
prunus_persica Prupe.1G435800_v2.0.a1
pyrus_communis pycom08g08230 pycom08g08240 pycom15g07780
rosa_chinensis RchiOBHm_Chr6g0307901
rosa_laevigata RLG00000010688
rosa_rugosa Rorug06G0361500
rosa_samantha Rh6AG470600 Rh6BG481600 Rh6CG487000 Rh6DG473100
rosa_wichuraiana Rw6G041090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 200
AccBSI CCGCTC 1 cut(s) 1556
AccI GTMKAC 3 cut(s) 194, 548, 772
AccII CGCG 3 cut(s) 21, 123, 191
AciI CCGC 7 cut(s) 19, 116, 123, 224, 653, 758, 1554
AclWI GGATC 8 cut(s) 1127, 1140, 1224, 1339, 1441, 1454, 1468, 1556
AcsI RAATTY 3 cut(s) 916, 1705, 1832
AcuI CTGAAG 4 cut(s) 1122, 1811, 1875, 1882
AcyI GRCGYC 3 cut(s) 90, 140, 197
AfaI GTAC 4 cut(s) 188, 1303, 1433, 1486
AfiI CCNNNNNNNGG 4 cut(s) 936, 1400, 1560, 1750
AflIII ACRYGT 1 cut(s) 189
AgsI TTSAA 6 cut(s) 178, 1037, 1359, 1570, 1762, 1885
AjiI CACGTC 1 cut(s) 154
AjnI CCWGG 3 cut(s) 84, 1393, 1449
AleI CACNNNNGTG 1 cut(s) 1735
AluBI AGCT 9 cut(s) 34, 166, 181, 232, 780, 1388, 1573, 1767, 1893
AluI AGCT 9 cut(s) 34, 166, 181, 232, 780, 1388, 1573, 1767, 1893
Alw21I GWGCWC 1 cut(s) 1126
Alw26I GTCTC 2 cut(s) 813, 1335
AlwI GGATC 8 cut(s) 1127, 1140, 1224, 1339, 1441, 1454, 1468, 1556
Ama87I CYCGRG 2 cut(s) 486, 700
AoxI GGCC 4 cut(s) 159, 204, 483, 1396
ApeKI GCWGC 2 cut(s) 650, 973
ApoI RAATTY 3 cut(s) 916, 1705, 1832
ArsI GACNNNNNNTTYG 2 cut(s) 1824, 1856
Asp700I GAANNNNTTC 1 cut(s) 102
AspA2I CCTAGG 1 cut(s) 935
AspLEI GCGC 2 cut(s) 123, 1665
AspS9I GGNCC 4 cut(s) 125, 205, 484, 1143
AsuC2I CCSGG 5 cut(s) 487, 488, 701, 702, 716
AsuHPI GGTGA 7 cut(s) 238, 283, 730, 1319, 1729, 1834, 1842
AsuII TTCGAA 2 cut(s) 410, 1068
AvaI CYCGRG 2 cut(s) 486, 700
AvaII GGWCC 2 cut(s) 125, 1143
AvrII CCTAGG 1 cut(s) 935
BamHI GGATCC 2 cut(s) 1132, 1446
BanII GRGCYC 2 cut(s) 13, 707
BarI GAAGNNNNNNTAC 2 cut(s) 170, 202
BbsI GAAGAC 2 cut(s) 455, 1517
Bbv12I GWGCWC 1 cut(s) 1126
BbvCI CCTCAGC 1 cut(s) 678
BbvI GCAGC 2 cut(s) 662, 960
BccI CCATC 7 cut(s) 887, 1070, 1201, 1304, 1331, 1430, 1499
BceAI ACGGC 1 cut(s) 1164
BcgI CGANNNNNNTGC 2 cut(s) 1817, 1851
BciT130I CCWGG 3 cut(s) 86, 1395, 1451
BcnI CCSGG 5 cut(s) 487, 488, 701, 702, 716
BcoDI GTCTC 2 cut(s) 813, 1335
BfaI CTAG 2 cut(s) 936, 1299
BfmI CTRYAG 1 cut(s) 316
BfoI RGCGCY 1 cut(s) 1666
BglII AGATCT 1 cut(s) 25
BisI GCNGC 4 cut(s) 19, 651, 759, 974
BlnI CCTAGG 1 cut(s) 935
BlsI GCNGC 4 cut(s) 20, 652, 760, 975
BmcAI AGTACT 1 cut(s) 1303
Bme1390I CCNGG 8 cut(s) 86, 487, 488, 701, 702, 716, 1395, 1451
Bme18I GGWCC 2 cut(s) 125, 1143
BmeT110I CYCGRG 2 cut(s) 486, 700
BmgBI CACGTC 1 cut(s) 154
BmgT120I GGNCC 4 cut(s) 125, 205, 484, 1143
BmiI GGNNCC 6 cut(s) 127, 207, 1134, 1144, 1253, 1448
BmrFI CCNGG 8 cut(s) 86, 487, 488, 701, 702, 716, 1395, 1451
BmrI ACTGGG 1 cut(s) 1621
BmsI GCATC 3 cut(s) 429, 664, 1270
BmuI ACTGGG 1 cut(s) 1621
BpiI GAAGAC 2 cut(s) 455, 1517
BpmI CTGGAG 1 cut(s) 1255
Bpu10I CCTNAGC 1 cut(s) 678
Bpu14I TTCGAA 2 cut(s) 410, 1068
BpuEI CTTGAG 4 cut(s) 50, 152, 167, 757
BpuMI CCSGG 5 cut(s) 487, 488, 701, 702, 716
BsaAI YACGTR 1 cut(s) 1431
BsaBI GATNNNNATC 1 cut(s) 1478
BsaHI GRCGYC 3 cut(s) 90, 140, 197
BsaI GGTCTC 1 cut(s) 1335
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 4 cut(s) 936, 1400, 1560, 1750
Bse118I RCCGGY 1 cut(s) 136
Bse1I ACTGG 6 cut(s) 1045, 1164, 1288, 1309, 1627, 1908
Bse8I GATNNNNATC 1 cut(s) 1478
BseBI CCWGG 3 cut(s) 86, 1395, 1451
BseJI GATNNNNATC 1 cut(s) 1478
BseLI CCNNNNNNNGG 4 cut(s) 936, 1400, 1560, 1750
BseMII CTCAG 5 cut(s) 57, 426, 669, 683, 1047
BseNI ACTGG 6 cut(s) 1045, 1164, 1288, 1309, 1627, 1908
BseRI GAGGAG 4 cut(s) 368, 386, 695, 758
BseXI GCAGC 2 cut(s) 662, 960
BseYI CCCAGC 1 cut(s) 1529
Bsh1236I CGCG 3 cut(s) 21, 123, 191
BshFI GGCC 4 cut(s) 161, 206, 485, 1398
BsiHKAI GWGCWC 1 cut(s) 1126
BsiHKCI CYCGRG 2 cut(s) 486, 700
BsiSI CCGG 5 cut(s) 137, 487, 701, 716, 1348
BsiWI CGTACG 1 cut(s) 1431
BslFI GGGAC 2 cut(s) 1093, 1170
BslI CCNNNNNNNGG 4 cut(s) 936, 1400, 1560, 1750
BsmAI GTCTC 2 cut(s) 813, 1335
BsmFI GGGAC 2 cut(s) 1093, 1170
BsmI GAATGC 1 cut(s) 828
BsnI GGCC 4 cut(s) 161, 206, 485, 1398
Bso31I GGTCTC 1 cut(s) 1335
BsoBI CYCGRG 2 cut(s) 486, 700
Bsp119I TTCGAA 2 cut(s) 410, 1068
Bsp1286I GDGCHC 3 cut(s) 13, 707, 1126
Bsp143I GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
BspACI CCGC 7 cut(s) 19, 116, 123, 224, 653, 758, 1554
BspANI GGCC 4 cut(s) 161, 206, 485, 1398
BspCNI CTCAG 5 cut(s) 56, 427, 670, 684, 1048
BspFNI CGCG 3 cut(s) 21, 123, 191
BspHI TCATGA 1 cut(s) 978
BspLI GGNNCC 6 cut(s) 127, 207, 1134, 1144, 1253, 1448
BspPI GGATC 8 cut(s) 1127, 1140, 1224, 1339, 1441, 1454, 1468, 1556
BspQI GCTCTTC 2 cut(s) 48, 1757
BspT104I TTCGAA 2 cut(s) 410, 1068
BspTNI GGTCTC 1 cut(s) 1335
BsrBI CCGCTC 1 cut(s) 1556
BsrFI RCCGGY 1 cut(s) 136
BsrI ACTGG 6 cut(s) 1045, 1164, 1288, 1309, 1627, 1908
BssAI RCCGGY 1 cut(s) 136
BssMI GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
BssNAI GTATAC 2 cut(s) 549, 773
BssNI GRCGYC 3 cut(s) 90, 140, 197
BssT1I CCWWGG 4 cut(s) 935, 1255, 1399, 1559
Bst1107I GTATAC 2 cut(s) 549, 773
Bst2UI CCWGG 3 cut(s) 86, 1395, 1451
Bst4CI ACNGT 3 cut(s) 851, 1128, 1681
Bst6I CTCTTC 3 cut(s) 48, 69, 1757
BstACI GRCGYC 3 cut(s) 90, 140, 197
BstAPI GCANNNNNTGC 1 cut(s) 791
BstBAI YACGTR 1 cut(s) 1431
BstBI TTCGAA 2 cut(s) 410, 1068
BstC8I GCNNGC 6 cut(s) 138, 204, 925, 1001, 1377, 1600
BstDEI CTNAG 6 cut(s) 43, 435, 543, 678, 692, 1056
BstEII GGTNACC 1 cut(s) 274
BstENI CCTNNNNNAGG 1 cut(s) 1748
BstFNI CGCG 3 cut(s) 21, 123, 191
BstH2I RGCGCY 1 cut(s) 1666
BstHHI GCGC 2 cut(s) 123, 1665
BstKTI GATC 8 cut(s) 28, 113, 1135, 1219, 1347, 1449, 1476, 1551
BstMAI GTCTC 2 cut(s) 813, 1335
BstMBI GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
BstMWI GCNNNNNNNGC 5 cut(s) 791, 1385, 1764, 1773, 1899
BstNI CCWGG 3 cut(s) 86, 1395, 1451
BstNSI RCATGY 1 cut(s) 1421
BstPI GGTNACC 1 cut(s) 274
BstSCI CCNGG 8 cut(s) 84, 485, 486, 699, 700, 714, 1393, 1449
BstSFI CTRYAG 1 cut(s) 316
BstSNI TACGTA 1 cut(s) 1431
BstUI CGCG 3 cut(s) 21, 123, 191
BstV1I GCAGC 2 cut(s) 662, 960
BstV2I GAAGAC 2 cut(s) 455, 1517
BstX2I RGATCY 6 cut(s) 25, 1132, 1216, 1344, 1446, 1548
BstXI CCANNNNNNTGG 1 cut(s) 1153
BstYI RGATCY 6 cut(s) 25, 1132, 1216, 1344, 1446, 1548
BstZ17I GTATAC 2 cut(s) 549, 773
BsuRI GGCC 4 cut(s) 161, 206, 485, 1398
BtrI CACGTC 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 1295
Cac8I GCNNGC 6 cut(s) 138, 204, 925, 1001, 1377, 1600
CciI TCATGA 1 cut(s) 978
CfoI GCGC 2 cut(s) 123, 1665
Cfr10I RCCGGY 1 cut(s) 136
Cfr13I GGNCC 4 cut(s) 125, 205, 484, 1143
Cfr9I CCCGGG 2 cut(s) 486, 700
CseI GACGC 4 cut(s) 98, 129, 180, 455
Csp6I GTAC 4 cut(s) 187, 1302, 1432, 1485
CspCI CAANNNNNGTGG 2 cut(s) 1305, 1340
CviAII CATG 9 cut(s) 242, 764, 854, 979, 1418, 1489, 1635, 1733, 1822
CviQI GTAC 4 cut(s) 187, 1302, 1432, 1485
DdeI CTNAG 6 cut(s) 43, 435, 543, 678, 692, 1056
DpnI GATC 8 cut(s) 27, 112, 1134, 1218, 1346, 1448, 1475, 1550
DpnII GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
Eam1104I CTCTTC 3 cut(s) 48, 69, 1757
EarI CTCTTC 3 cut(s) 48, 69, 1757
EciI GGCGGA 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 1431
Eco130I CCWWGG 4 cut(s) 935, 1255, 1399, 1559
Eco24I GRGCYC 2 cut(s) 13, 707
Eco31I GGTCTC 1 cut(s) 1335
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 2 cut(s) 125, 1143
Eco57I CTGAAG 4 cut(s) 1122, 1811, 1875, 1882
Eco88I CYCGRG 2 cut(s) 486, 700
Eco91I GGTNACC 1 cut(s) 274
EcoNI CCTNNNNNAGG 1 cut(s) 1748
EcoO109I RGGNCCY 1 cut(s) 205
EcoO65I GGTNACC 1 cut(s) 274
EcoRII CCWGG 3 cut(s) 84, 1393, 1449
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 4 cut(s) 935, 1255, 1399, 1559
EcoT38I GRGCYC 2 cut(s) 13, 707
ErhI CCWWGG 4 cut(s) 935, 1255, 1399, 1559
FaeI CATG 9 cut(s) 245, 767, 857, 982, 1421, 1492, 1638, 1736, 1825
FalI AAGNNNNNCTT 4 cut(s) 1508, 1540, 1848, 1880
FaqI GGGAC 2 cut(s) 1093, 1170
FatI CATG 9 cut(s) 241, 763, 853, 978, 1417, 1488, 1634, 1732, 1821
FblI GTMKAC 3 cut(s) 194, 548, 772
Fnu4HI GCNGC 4 cut(s) 19, 651, 759, 974
FriOI GRGCYC 2 cut(s) 13, 707
Fsp4HI GCNGC 4 cut(s) 19, 651, 759, 974
FspBI CTAG 2 cut(s) 936, 1299
GlaI GCGC 2 cut(s) 122, 1664
GluI GCNGC 4 cut(s) 19, 651, 759, 974
GsaI CCCAGC 1 cut(s) 1533
GsuI CTGGAG 1 cut(s) 1255
HaeII RGCGCY 1 cut(s) 1666
HaeIII GGCC 4 cut(s) 161, 206, 485, 1398
HapII CCGG 5 cut(s) 137, 487, 701, 716, 1348
HgaI GACGC 4 cut(s) 98, 129, 180, 455
HhaI GCGC 2 cut(s) 123, 1665
Hin1I GRCGYC 3 cut(s) 90, 140, 197
Hin1II CATG 9 cut(s) 245, 767, 857, 982, 1421, 1492, 1638, 1736, 1825
Hin6I GCGC 2 cut(s) 121, 1663
HinP1I GCGC 2 cut(s) 121, 1663
HincII GTYRAC 1 cut(s) 195
HindII GTYRAC 1 cut(s) 195
HpaII CCGG 5 cut(s) 137, 487, 701, 716, 1348
HphI GGTGA 7 cut(s) 238, 283, 730, 1319, 1729, 1834, 1842
Hpy166II GTNNAC 6 cut(s) 195, 549, 689, 773, 1146, 1494
Hpy188I TCNGA 4 cut(s) 46, 108, 216, 283
Hpy188III TCNNGA 9 cut(s) 29, 731, 979, 1214, 1272, 1334, 1583, 1751, 1789
Hpy8I GTNNAC 6 cut(s) 195, 549, 689, 773, 1146, 1494
Hpy99I CGWCG 5 cut(s) 145, 196, 199, 202, 471
HpyAV CCTTC 9 cut(s) 62, 613, 934, 949, 1090, 1146, 1714, 1786, 1906
HpyCH4III ACNGT 3 cut(s) 851, 1128, 1681
HpyCH4IV ACGT 4 cut(s) 153, 197, 452, 1430
HpyCH4V TGCA 8 cut(s) 442, 710, 794, 1223, 1676, 1825, 1838, 1874
HpyF10VI GCNNNNNNNGC 5 cut(s) 791, 1385, 1764, 1773, 1899
HpyF3I CTNAG 6 cut(s) 43, 435, 543, 678, 692, 1056
HpySE526I ACGT 4 cut(s) 153, 197, 452, 1430
Hsp92I GRCGYC 3 cut(s) 90, 140, 197
Hsp92II CATG 9 cut(s) 245, 767, 857, 982, 1421, 1492, 1638, 1736, 1825
HspAI GCGC 2 cut(s) 121, 1663
KroI GCCGGC 1 cut(s) 136
KroNI GCCGGC 1 cut(s) 138
Kzo9I GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
LguI GCTCTTC 2 cut(s) 48, 1757
LmnI GCTCC 8 cut(s) 118, 463, 592, 932, 1121, 1561, 1660, 1898
Lsp1109I GCAGC 2 cut(s) 662, 960
LweI GCATC 3 cut(s) 429, 664, 1270
MaeI CTAG 2 cut(s) 936, 1299
MaeII ACGT 4 cut(s) 153, 197, 452, 1430
MaeIII GTNAC 6 cut(s) 274, 1051, 1426, 1639, 1728, 1840
MalI GATC 8 cut(s) 27, 112, 1134, 1218, 1346, 1448, 1475, 1550
MbiI CCGCTC 1 cut(s) 1556
MboI GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
MfeI CAATTG 2 cut(s) 1246, 1317
MflI RGATCY 6 cut(s) 25, 1132, 1216, 1344, 1446, 1548
MhlI GDGCHC 3 cut(s) 13, 707, 1126
MluCI AATT 8 cut(s) 844, 883, 916, 1246, 1317, 1363, 1705, 1832
MluI ACGCGT 1 cut(s) 189
MlyI GAGTC 5 cut(s) 35, 501, 815, 991, 1841
MmeI TCCRAC 4 cut(s) 226, 1110, 1663, 1735
MreI CGCCGGCG 1 cut(s) 136
MroNI GCCGGC 1 cut(s) 136
MroXI GAANNNNTTC 1 cut(s) 102
MseI TTAA 3 cut(s) 423, 606, 840
MslI CAYNNNNRTG 2 cut(s) 1422, 1735
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 5 cut(s) 137, 487, 701, 716, 1348
MspR9I CCNGG 8 cut(s) 86, 487, 488, 701, 702, 716, 1395, 1451
MunI CAATTG 2 cut(s) 1246, 1317
Mva1269I GAATGC 1 cut(s) 828
MvaI CCWGG 3 cut(s) 86, 1395, 1451
MvnI CGCG 3 cut(s) 21, 123, 191
MwoI GCNNNNNNNGC 5 cut(s) 791, 1385, 1764, 1773, 1899
NaeI GCCGGC 1 cut(s) 138
NciI CCSGG 5 cut(s) 487, 488, 701, 702, 716
NdeII GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
NgoMIV GCCGGC 1 cut(s) 136
NlaIII CATG 9 cut(s) 245, 767, 857, 982, 1421, 1492, 1638, 1736, 1825
NlaIV GGNNCC 6 cut(s) 127, 207, 1134, 1144, 1253, 1448
NmeAIII GCCGAG 1 cut(s) 118
NmuCI GTSAC 4 cut(s) 1051, 1639, 1728, 1840
NspI RCATGY 1 cut(s) 1421
NspV TTCGAA 2 cut(s) 410, 1068
OliI CACNNNNGTG 1 cut(s) 1735
PagI TCATGA 1 cut(s) 978
PciSI GCTCTTC 2 cut(s) 48, 1757
PctI GAATGC 1 cut(s) 828
PdiI GCCGGC 1 cut(s) 138
PdmI GAANNNNTTC 1 cut(s) 102
PfeI GAWTC 7 cut(s) 103, 383, 659, 727, 1576, 1586, 1799
Pfl23II CGTACG 1 cut(s) 1431
PfoI TCCNGGA 1 cut(s) 84
PkrI GCNGC 4 cut(s) 20, 652, 760, 975
PleI GAGTC 5 cut(s) 35, 500, 815, 990, 1841
PpsI GAGTC 5 cut(s) 35, 500, 815, 990, 1841
Ppu21I YACGTR 1 cut(s) 1431
Psp6I CCWGG 3 cut(s) 84, 1393, 1449
PspEI GGTNACC 1 cut(s) 274
PspFI CCCAGC 1 cut(s) 1529
PspGI CCWGG 3 cut(s) 84, 1393, 1449
PspLI CGTACG 1 cut(s) 1431
PspN4I GGNNCC 6 cut(s) 127, 207, 1134, 1144, 1253, 1448
PspPI GGNCC 4 cut(s) 125, 205, 484, 1143
PsuI RGATCY 6 cut(s) 25, 1132, 1216, 1344, 1446, 1548
RsaI GTAC 4 cut(s) 188, 1303, 1433, 1486
RsaNI GTAC 4 cut(s) 187, 1302, 1432, 1485
RseI CAYNNNNRTG 2 cut(s) 1422, 1735
SalI GTCGAC 1 cut(s) 193
SapI GCTCTTC 2 cut(s) 48, 1757
SaqAI TTAA 3 cut(s) 423, 606, 840
SatI GCNGC 4 cut(s) 19, 651, 759, 974
Sau3AI GATC 8 cut(s) 25, 110, 1132, 1216, 1344, 1446, 1473, 1548
Sau96I GGNCC 4 cut(s) 125, 205, 484, 1143
ScaI AGTACT 1 cut(s) 1303
SchI GAGTC 5 cut(s) 35, 501, 815, 991, 1841
ScrFI CCNGG 8 cut(s) 86, 487, 488, 701, 702, 716, 1395, 1451
SduI GDGCHC 3 cut(s) 13, 707, 1126
SfaNI GCATC 3 cut(s) 429, 664, 1270
SfcI CTRYAG 1 cut(s) 316
SfuI TTCGAA 2 cut(s) 410, 1068
SgrAI CRCCGGYG 1 cut(s) 136
SgrDI CGTCGACG 1 cut(s) 193
SinI GGWCC 2 cut(s) 125, 1143
SmaI CCCGGG 2 cut(s) 488, 702
SmiMI CAYNNNNRTG 2 cut(s) 1422, 1735
SmlI CTYRAG 4 cut(s) 29, 167, 182, 736
SmoI CTYRAG 4 cut(s) 29, 167, 182, 736
SnaBI TACGTA 1 cut(s) 1431
SrfI GCCCGGGC 1 cut(s) 702
Sse9I AATT 8 cut(s) 844, 883, 916, 1246, 1317, 1363, 1705, 1832
SsiI CCGC 7 cut(s) 19, 116, 123, 224, 653, 758, 1554
SspMI CTAG 2 cut(s) 936, 1299
StyD4I CCNGG 8 cut(s) 84, 485, 486, 699, 700, 714, 1393, 1449
StyI CCWWGG 4 cut(s) 935, 1255, 1399, 1559
TaaI ACNGT 3 cut(s) 851, 1128, 1681
TaiI ACGT 4 cut(s) 156, 200, 455, 1433
TaqI TCGA 3 cut(s) 194, 410, 1068
TasI AATT 8 cut(s) 844, 883, 916, 1246, 1317, 1363, 1705, 1832
TatI WGTACW 1 cut(s) 1301
TauI GCSGC 2 cut(s) 21, 761
TfiI GAWTC 7 cut(s) 103, 383, 659, 727, 1576, 1586, 1799
Tru1I TTAA 3 cut(s) 423, 606, 840
Tru9I TTAA 3 cut(s) 423, 606, 840
TscAI CASTG 1 cut(s) 1295
TseFI GTSAC 4 cut(s) 1051, 1639, 1728, 1840
TseI GCWGC 2 cut(s) 650, 973
Tsp45I GTSAC 4 cut(s) 1051, 1639, 1728, 1840
TspDTI ATGAA 9 cut(s) 230, 461, 518, 968, 1004, 1010, 1109, 1623, 1810
TspGWI ACGGA 1 cut(s) 605
TspMI CCCGGG 2 cut(s) 486, 700
TspRI CASTG 1 cut(s) 1295
VpaK11BI GGWCC 2 cut(s) 125, 1143
XagI CCTNNNNNAGG 1 cut(s) 1748
XapI RAATTY 3 cut(s) 916, 1705, 1832
XceI RCATGY 1 cut(s) 1421
XmaI CCCGGG 2 cut(s) 486, 700
XmaJI CCTAGG 1 cut(s) 935
XmiI GTMKAC 3 cut(s) 194, 548, 772
XmnI GAANNNNTTC 1 cut(s) 102
XspI CTAG 2 cut(s) 936, 1299
ZraI GACGTC 1 cut(s) 198
ZrmI AGTACT 1 cut(s) 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.