Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0017383

Physical Location & Seq

Genomic Coordinates Reverse (-)

17126536 .. 17129348

Gene Structure 2813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG122100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGAACACGTTCCTTAAAAACATGGAAATGCCCTCCGCCAAAACAGTGATGTCAACGGCGGCCTCCGTCGCCGCCACCGCCATGGTCATCCGCTCCATTTCTCGCGACTTCATACCCAAGGACGTCCACCACTATCTTTCCACCAAAATCAGACGCTTAATGAACTCGCTCTCTTCGCAACTCACCCTAGTCATCGACGAGTTCGAGGGTCTCAACCGGAACCACATTTTCACGGCCGCCCAAGCTTACTTACGACCCACAATCTCCCCAAATTCCAAAAGGTTCAGAGTCACAATGCCGACCCAACAAAACAAAATTTCCGTTTCCATGGAAAAGAACGAAGAGATCATTGACTTCTTCGACGGAGTCAAACTCCAGTGGAAGCTGGTCTCAACCCAAACCTCGCCCAAGTACATAGGCGGCCCAGGATCCGAATACGAGTCCACGGTCATGTCGGAGCTCCGGTACTTCGAGTTGAGCTTCCACAAGAAGCACAAAGACTTGGTTCTCGGTTCTTACTTGCCATTTGTGTTGCAAAAGGCCGAGGAAGTTAAGGAAGAGAGGAAGACCTTGAAGCTCTTCACTTTGAAATATGGGAGAAGGATTCAAGTAGTGGGAGGGTCCATGTGGCAATCAGTGAACCTTGATCACCCCGCGACGTTCGACACATTGGCAATGGATGAAGAGGTCCACAAGACGATAGTGGAGGATCTTGAGAGGTTTGTGAGGAGGAAGGAGTATTATAGGAAGGTTGGGAAGGCTTGGAAAAGGGGATACTTGCTGTTTGGGCCTCCTGGGACTGGCAAGTCGAGCTTGGTTGCTGCCATGGCCAATTACTTGAATTTTGATATCTATGACTTGGAGTTGAGTGAGATTAGGAGTAATTCTCAGCTCAGGACGTTGATGATGTCCACGGCGAACAGGTCCATTCTTGTGGTGGAGGATATTGATTGCTCCATTGAACTACAGAACAGGCTTGCAAATGCCAGGGCCGCCGGCCCTCGTGCTTTTAATCCTCCGAAGACTGAGGTGACTCTGTCAGGATTGCTCAACTTCATAGATGGACTGTGGTCAAGCTGTGGCGACGAGCGGATCATAGTCTTCACTACCAATCACAAAGAGCGGCTTGACTCTGCCTTGTTACGCCCTGGTCGAATGGATGTGCACATCCACATGTCCTTTTGCACCCCATGTGGGTTCAAAATTCTTGCTTCTAACTACCTTGGAATTATTGAGCACACACTTTTCTTTGACATAGAGAAGTTGATAGCCACAATGAAGGTTACTCCGGCAGAGATAGGAGAGCAGTTACTGAAGAATGAGGAGCCTGATGGTGCATTGAGAGACCTACTTGAGTTCCTTGACAGGAAGAATAGAGCAATTGAGGAAGCTGCAAGTAAGTCAGAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

470

Amino Acids

53.46

Weight (kDa)

8.63

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	38 - 130	2.4e-26	Domain associated at C-terminal with AAA
AAA	PF00004	259 - 392	4.1e-19	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	395 - 463	1.3e-20	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017383)

Species	Orthologous Gene IDs
malus_domestica	MD15G1248000.v1.1
prunus_persica	Prupe.8G092600_v2.0.a1
pyrus_communis	pycom15g21780
rosa_chinensis	RchiOBHm_Chr6g0265431
rosa_laevigata	RLG00000014189
rosa_multiflora	Rmu_co8002042.1_g000001 Rmu_ssc0000066.1_g000008
rosa_roxburghii	Rroxscaffold_175G00432400 Rroxscaffold_7G00202660
rosa_rugosa	Rorug06G0017200
rosa_samantha	Rh6BG137800 Rh6DG122100
rosa_wichuraiana	Rw6G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	805
AatII	GACGTC	1 cut(s)	126
AccBSI	CCGCTC	3 cut(s)	93, 1090, 1123
AccII	CGCG	2 cut(s)	105, 656
AclWI	GGATC	4 cut(s)	423, 436, 717, 1100
AcoI	YGGCCR	2 cut(s)	234, 828
AcsI	RAATTY	4 cut(s)	271, 315, 841, 1203
AcuI	CTGAAG	1 cut(s)	1334
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	2 cut(s)	413, 467
AfiI	CCNNNNNNNGG	2 cut(s)	800, 1194
AflIII	ACRYGT	2 cut(s)	6, 1173
AgsI	TTSAA	6 cut(s)	574, 589, 608, 841, 962, 1201
AjnI	CCWGG	4 cut(s)	424, 793, 986, 1147
AluBI	AGCT	9 cut(s)	245, 385, 460, 480, 577, 813, 892, 1077, 1391
AluI	AGCT	9 cut(s)	245, 385, 460, 480, 577, 813, 892, 1077, 1391
Alw21I	GWGCWC	3 cut(s)	462, 1167, 1239
Alw26I	GTCTC	3 cut(s)	215, 394, 1338
Alw44I	GTGCAC	1 cut(s)	1163
AlwI	GGATC	4 cut(s)	423, 436, 717, 1100
AlwNI	CAGNNNCTG	1 cut(s)	1312
AoxI	GGCC	8 cut(s)	60, 234, 421, 540, 788, 828, 990, 997
ApaLI	GTGCAC	1 cut(s)	1163
ApeKI	GCWGC	2 cut(s)	821, 1391
ApoI	RAATTY	4 cut(s)	271, 315, 841, 1203
Asp700I	GAANNNNTTC	2 cut(s)	8, 578
AspS9I	GGNCC	7 cut(s)	422, 621, 688, 788, 924, 990, 998
AsuHPI	GGTGA	3 cut(s)	175, 641, 1042
AvaII	GGWCC	3 cut(s)	621, 688, 924
BaeGI	GKGCMC	1 cut(s)	1167
BalI	TGGCCA	1 cut(s)	830
BamHI	GGATCC	1 cut(s)	428
BanII	GRGCYC	1 cut(s)	462
BauI	CACGAG	1 cut(s)	1002
BbsI	GAAGAC	3 cut(s)	572, 1028, 1093
Bbv12I	GWGCWC	3 cut(s)	462, 1167, 1239
BbvI	GCAGC	2 cut(s)	808, 1378
BccI	CCATC	2 cut(s)	1055, 1325
BceAI	ACGGC	3 cut(s)	72, 249, 930
BciT130I	CCWGG	4 cut(s)	426, 795, 988, 1149
BciVI	GTATCC	1 cut(s)	767
BclI	TGATCA	1 cut(s)	646
BcoDI	GTCTC	3 cut(s)	215, 394, 1338
BfaI	CTAG	1 cut(s)	188
BfmI	CTRYAG	1 cut(s)	965
BfuI	GTATCC	1 cut(s)	767
BisI	GCNGC	8 cut(s)	60, 72, 237, 421, 822, 993, 1124, 1392
BlsI	GCNGC	8 cut(s)	61, 73, 238, 422, 823, 994, 1125, 1393
Bme1390I	CCNGG	4 cut(s)	426, 795, 988, 1149
Bme18I	GGWCC	3 cut(s)	621, 688, 924
BmgT120I	GGNCC	7 cut(s)	422, 621, 688, 788, 924, 990, 998
BmiI	GGNNCC	4 cut(s)	221, 430, 622, 1326
BmrFI	CCNGG	4 cut(s)	426, 795, 988, 1149
BoxI	GACNNNNGTC	1 cut(s)	1069
BpiI	GAAGAC	3 cut(s)	572, 1028, 1093
BplI	GAGNNNNNCTC	4 cut(s)	357, 389, 871, 903
BpmI	CTGGAG	1 cut(s)	359
Bpu10I	CCTNAGC	1 cut(s)	893
BpuEI	CTTGAG	2 cut(s)	734, 1373
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	3 cut(s)	215, 394, 1338
BsaWI	WCCGGW	2 cut(s)	216, 462
BsaXI	ACNNNNNCTCC	2 cut(s)	449, 479
Bsc4I	CCNNNNNNNGG	2 cut(s)	800, 1194
Bse118I	RCCGGY	1 cut(s)	995
Bse1I	ACTGG	2 cut(s)	376, 805
Bse3DI	GCAATG	1 cut(s)	681
BseBI	CCWGG	4 cut(s)	426, 795, 988, 1149
BseGI	GGATG	4 cut(s)	87, 685, 1165, 1167
BseLI	CCNNNNNNNGG	2 cut(s)	800, 1194
BseMI	GCAATG	1 cut(s)	681
BseMII	CTCAG	3 cut(s)	902, 907, 1017
BseNI	ACTGG	2 cut(s)	376, 805
BseRI	GAGGAG	2 cut(s)	742, 1337
BseSI	GKGCMC	1 cut(s)	1167
BseX3I	CGGCCG	1 cut(s)	234
BseXI	GCAGC	2 cut(s)	808, 1378
Bsh1236I	CGCG	2 cut(s)	105, 656
Bsh1285I	CGRYCG	1 cut(s)	237
BshFI	GGCC	8 cut(s)	62, 236, 423, 542, 790, 830, 992, 999
BsiEI	CGRYCG	1 cut(s)	237
BsiHKAI	GWGCWC	3 cut(s)	462, 1167, 1239
BsiSI	CCGG	4 cut(s)	217, 463, 996, 1289
BslFI	GGGAC	1 cut(s)	811
BslI	CCNNNNNNNGG	2 cut(s)	800, 1194
BsmAI	GTCTC	3 cut(s)	215, 394, 1338
BsmFI	GGGAC	1 cut(s)	811
BsnI	GGCC	8 cut(s)	62, 236, 423, 542, 790, 830, 992, 999
Bso31I	GGTCTC	3 cut(s)	215, 394, 1338
Bsp1286I	GDGCHC	3 cut(s)	462, 1167, 1239
Bsp143I	GATC	5 cut(s)	345, 428, 646, 709, 1092
Bsp19I	CCATGG	3 cut(s)	81, 327, 825
Bsp68I	TCGCGA	1 cut(s)	105
BspANI	GGCC	8 cut(s)	62, 236, 423, 542, 790, 830, 992, 999
BspCNI	CTCAG	3 cut(s)	901, 906, 1018
BspFNI	CGCG	2 cut(s)	105, 656
BspLI	GGNNCC	4 cut(s)	221, 430, 622, 1326
BspPI	GGATC	4 cut(s)	423, 436, 717, 1100
BspQI	GCTCTTC	1 cut(s)	584
BspTNI	GGTCTC	3 cut(s)	215, 394, 1338
BsrBI	CCGCTC	3 cut(s)	93, 1090, 1123
BsrDI	GCAATG	1 cut(s)	681
BsrFI	RCCGGY	1 cut(s)	995
BsrI	ACTGG	2 cut(s)	376, 805
BssAI	RCCGGY	1 cut(s)	995
BssMI	GATC	5 cut(s)	345, 428, 646, 709, 1092
BssNI	GRCGYC	1 cut(s)	123
BssSI	CACGAG	1 cut(s)	1002
BssT1I	CCWWGG	5 cut(s)	81, 117, 327, 825, 1222
Bst2BI	CACGAG	1 cut(s)	1002
Bst2UI	CCWGG	4 cut(s)	426, 795, 988, 1149
Bst4CI	ACNGT	3 cut(s)	46, 448, 1068
Bst6I	CTCTTC	5 cut(s)	178, 336, 552, 584, 678
BstACI	GRCGYC	1 cut(s)	123
BstC8I	GCNNGC	2 cut(s)	978, 997
BstDEI	CTNAG	3 cut(s)	888, 893, 1026
BstDSI	CCRYGG	5 cut(s)	81, 327, 444, 825, 912
BstF5I	GGATG	4 cut(s)	87, 685, 1165, 1167
BstFNI	CGCG	2 cut(s)	105, 656
BstKTI	GATC	5 cut(s)	348, 431, 649, 712, 1095
BstMAI	GTCTC	3 cut(s)	215, 394, 1338
BstMBI	GATC	5 cut(s)	345, 428, 646, 709, 1092
BstMCI	CGRYCG	1 cut(s)	237
BstMWI	GCNNNNNNNGC	8 cut(s)	68, 77, 175, 242, 787, 810, 827, 992
BstNI	CCWGG	4 cut(s)	426, 795, 988, 1149
BstNSI	RCATGY	1 cut(s)	1177
BstPAI	GACNNNNGTC	1 cut(s)	1069
BstSCI	CCNGG	4 cut(s)	424, 793, 986, 1147
BstSFI	CTRYAG	1 cut(s)	965
BstSLI	GKGCMC	1 cut(s)	1167
BstUI	CGCG	2 cut(s)	105, 656
BstV1I	GCAGC	2 cut(s)	808, 1378
BstV2I	GAAGAC	3 cut(s)	572, 1028, 1093
BstX2I	RGATCY	2 cut(s)	428, 709
BstXI	CCANNNNNNTGG	2 cut(s)	82, 934
BstYI	RGATCY	2 cut(s)	428, 709
BstZI	CGGCCG	1 cut(s)	234
BsuI	GTATCC	1 cut(s)	767
BsuRI	GGCC	8 cut(s)	62, 236, 423, 542, 790, 830, 992, 999
BtgI	CCRYGG	5 cut(s)	81, 327, 444, 825, 912
BtsCI	GGATG	4 cut(s)	87, 685, 1165, 1167
BtsIMutI	CAGTG	3 cut(s)	51, 383, 642
BtuMI	TCGCGA	1 cut(s)	105
Cac8I	GCNNGC	2 cut(s)	978, 997
CaiI	CAGNNNCTG	1 cut(s)	1312
Cfr10I	RCCGGY	1 cut(s)	995
Cfr13I	GGNCC	7 cut(s)	422, 621, 688, 788, 924, 990, 998
CseI	GACGC	1 cut(s)	162
Csp6I	GTAC	2 cut(s)	412, 466
CviAII	CATG	8 cut(s)	22, 82, 328, 451, 625, 826, 1174, 1191
CviQI	GTAC	2 cut(s)	412, 466
DdeI	CTNAG	3 cut(s)	888, 893, 1026
DpnI	GATC	5 cut(s)	347, 430, 648, 711, 1094
DpnII	GATC	5 cut(s)	345, 428, 646, 709, 1092
DrdI	GACNNNNNNGTC	1 cut(s)	805
DseDI	GACNNNNNNGTC	1 cut(s)	805
EaeI	YGGCCR	2 cut(s)	234, 828
EagI	CGGCCG	1 cut(s)	234
Eam1104I	CTCTTC	5 cut(s)	178, 336, 552, 584, 678
EarI	CTCTTC	5 cut(s)	178, 336, 552, 584, 678
EciI	GGCGGA	1 cut(s)	25
Ecl136II	GAGCTC	1 cut(s)	460
EclXI	CGGCCG	1 cut(s)	234
Eco130I	CCWWGG	5 cut(s)	81, 117, 327, 825, 1222
Eco24I	GRGCYC	1 cut(s)	462
Eco31I	GGTCTC	3 cut(s)	215, 394, 1338
Eco32I	GATATC	1 cut(s)	850
Eco47I	GGWCC	3 cut(s)	621, 688, 924
Eco52I	CGGCCG	1 cut(s)	234
Eco53kI	GAGCTC	1 cut(s)	460
Eco57I	CTGAAG	1 cut(s)	1334
EcoICRI	GAGCTC	1 cut(s)	460
EcoRII	CCWGG	4 cut(s)	424, 793, 986, 1147
EcoRV	GATATC	1 cut(s)	850
EcoT14I	CCWWGG	5 cut(s)	81, 117, 327, 825, 1222
EcoT38I	GRGCYC	1 cut(s)	462
ErhI	CCWWGG	5 cut(s)	81, 117, 327, 825, 1222
FaeI	CATG	8 cut(s)	25, 85, 331, 454, 628, 829, 1177, 1194
FalI	AAGNNNNNCTT	4 cut(s)	797, 829, 1110, 1142
FaqI	GGGAC	1 cut(s)	811
FatI	CATG	8 cut(s)	21, 81, 327, 450, 624, 825, 1173, 1190
FauI	CCCGC	1 cut(s)	661
FbaI	TGATCA	1 cut(s)	646
Fnu4HI	GCNGC	8 cut(s)	60, 72, 237, 421, 822, 993, 1124, 1392
FokI	GGATG	4 cut(s)	74, 692, 1154, 1172
FriOI	GRGCYC	1 cut(s)	462
Fsp4HI	GCNGC	8 cut(s)	60, 72, 237, 421, 822, 993, 1124, 1392
FspBI	CTAG	1 cut(s)	188
GluI	GCNGC	8 cut(s)	60, 72, 237, 421, 822, 993, 1124, 1392
GsuI	CTGGAG	1 cut(s)	359
HaeIII	GGCC	8 cut(s)	62, 236, 423, 542, 790, 830, 992, 999
HapII	CCGG	4 cut(s)	217, 463, 996, 1289
HgaI	GACGC	1 cut(s)	162
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	8 cut(s)	25, 85, 331, 454, 628, 829, 1177, 1194
HincII	GTYRAC	1 cut(s)	54
HindII	GTYRAC	1 cut(s)	54
HindIII	AAGCTT	1 cut(s)	243
HinfI	GANTC	6 cut(s)	288, 366, 440, 604, 1033, 1130
HpaII	CCGG	4 cut(s)	217, 463, 996, 1289
HphI	GGTGA	3 cut(s)	175, 641, 1042
Hpy166II	GTNNAC	7 cut(s)	54, 127, 444, 640, 691, 912, 1165
Hpy188I	TCNGA	6 cut(s)	152, 287, 433, 457, 1020, 1405
Hpy188III	TCNNGA	4 cut(s)	104, 713, 895, 1041
Hpy8I	GTNNAC	7 cut(s)	54, 127, 444, 640, 691, 912, 1165
Hpy99I	CGWCG	5 cut(s)	71, 200, 365, 661, 1088
HpyAV	CCTTC	5 cut(s)	594, 727, 742, 751, 1273
HpyCH4III	ACNGT	3 cut(s)	46, 448, 1068
HpyCH4IV	ACGT	4 cut(s)	8, 123, 659, 899
HpyCH4V	TGCA	6 cut(s)	535, 980, 1165, 1185, 1337, 1394
HpyF10VI	GCNNNNNNNGC	8 cut(s)	68, 77, 175, 242, 787, 810, 827, 992
HpyF3I	CTNAG	3 cut(s)	888, 893, 1026
HpySE526I	ACGT	4 cut(s)	8, 123, 659, 899
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	8 cut(s)	25, 85, 331, 454, 628, 829, 1177, 1194
KroI	GCCGGC	1 cut(s)	995
KroNI	GCCGGC	1 cut(s)	997
Ksp22I	TGATCA	1 cut(s)	646
Kzo9I	GATC	5 cut(s)	345, 428, 646, 709, 1092
LguI	GCTCTTC	1 cut(s)	584
LmnI	GCTCC	5 cut(s)	98, 457, 465, 959, 1324
Lsp1109I	GCAGC	2 cut(s)	808, 1378
MaeI	CTAG	1 cut(s)	188
MaeII	ACGT	4 cut(s)	8, 123, 659, 899
MaeIII	GTNAC	5 cut(s)	289, 1030, 1140, 1282, 1308
MalI	GATC	5 cut(s)	347, 430, 648, 711, 1094
MbiI	CCGCTC	3 cut(s)	93, 1090, 1123
MboI	GATC	5 cut(s)	345, 428, 646, 709, 1092
MfeI	CAATTG	1 cut(s)	1380
MflI	RGATCY	2 cut(s)	428, 709
MhlI	GDGCHC	3 cut(s)	462, 1167, 1239
MlsI	TGGCCA	1 cut(s)	830
MluCI	AATT	8 cut(s)	271, 315, 832, 841, 883, 1203, 1227, 1380
MluNI	TGGCCA	1 cut(s)	830
MlyI	GAGTC	5 cut(s)	297, 375, 449, 1027, 1124
MmeI	TCCRAC	1 cut(s)	435
Mox20I	TGGCCA	1 cut(s)	830
MroNI	GCCGGC	1 cut(s)	995
MroXI	GAANNNNTTC	2 cut(s)	8, 578
MscI	TGGCCA	1 cut(s)	830
MseI	TTAA	4 cut(s)	15, 158, 552, 1011
MslI	CAYNNNNRTG	5 cut(s)	26, 80, 449, 932, 1172
Msp20I	TGGCCA	1 cut(s)	830
MspI	CCGG	4 cut(s)	217, 463, 996, 1289
MspR9I	CCNGG	4 cut(s)	426, 795, 988, 1149
MunI	CAATTG	1 cut(s)	1380
MvaI	CCWGG	4 cut(s)	426, 795, 988, 1149
MvnI	CGCG	2 cut(s)	105, 656
MwoI	GCNNNNNNNGC	8 cut(s)	68, 77, 175, 242, 787, 810, 827, 992
NaeI	GCCGGC	1 cut(s)	997
NcoI	CCATGG	3 cut(s)	81, 327, 825
NdeII	GATC	5 cut(s)	345, 428, 646, 709, 1092
NgoMIV	GCCGGC	1 cut(s)	995
NlaIII	CATG	8 cut(s)	25, 85, 331, 454, 628, 829, 1177, 1194
NlaIV	GGNNCC	4 cut(s)	221, 430, 622, 1326
NmeAIII	GCCGAG	1 cut(s)	568
NmuCI	GTSAC	2 cut(s)	289, 1030
NruI	TCGCGA	1 cut(s)	105
NspI	RCATGY	1 cut(s)	1177
PciI	ACATGT	1 cut(s)	1173
PciSI	GCTCTTC	1 cut(s)	584
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 1150
PdiI	GCCGGC	1 cut(s)	997
PdmI	GAANNNNTTC	2 cut(s)	8, 578
PfeI	GAWTC	1 cut(s)	604
PflFI	GACNNNGTC	2 cut(s)	365, 1036
PkrI	GCNGC	8 cut(s)	61, 73, 238, 422, 823, 994, 1125, 1393
PleI	GAGTC	5 cut(s)	296, 374, 448, 1027, 1124
PpsI	GAGTC	5 cut(s)	296, 374, 448, 1027, 1124
PscI	ACATGT	1 cut(s)	1173
PshAI	GACNNNNGTC	1 cut(s)	1069
Psp124BI	GAGCTC	1 cut(s)	462
Psp6I	CCWGG	4 cut(s)	424, 793, 986, 1147
PspGI	CCWGG	4 cut(s)	424, 793, 986, 1147
PspN4I	GGNNCC	4 cut(s)	221, 430, 622, 1326
PspPI	GGNCC	7 cut(s)	422, 621, 688, 788, 924, 990, 998
PstNI	CAGNNNCTG	1 cut(s)	1312
PsuI	RGATCY	2 cut(s)	428, 709
PsyI	GACNNNGTC	2 cut(s)	365, 1036
RruI	TCGCGA	1 cut(s)	105
RsaI	GTAC	2 cut(s)	413, 467
RsaNI	GTAC	2 cut(s)	412, 466
RseI	CAYNNNNRTG	5 cut(s)	26, 80, 449, 932, 1172
SacI	GAGCTC	1 cut(s)	462
SapI	GCTCTTC	1 cut(s)	584
SaqAI	TTAA	4 cut(s)	15, 158, 552, 1011
SatI	GCNGC	8 cut(s)	60, 72, 237, 421, 822, 993, 1124, 1392
Sau3AI	GATC	5 cut(s)	345, 428, 646, 709, 1092
Sau96I	GGNCC	7 cut(s)	422, 621, 688, 788, 924, 990, 998
SchI	GAGTC	5 cut(s)	297, 375, 449, 1027, 1124
ScrFI	CCNGG	4 cut(s)	426, 795, 988, 1149
SduI	GDGCHC	3 cut(s)	462, 1167, 1239
SfcI	CTRYAG	1 cut(s)	965
SinI	GGWCC	3 cut(s)	621, 688, 924
SmiMI	CAYNNNNRTG	5 cut(s)	26, 80, 449, 932, 1172
SmlI	CTYRAG	2 cut(s)	713, 1352
SmoI	CTYRAG	2 cut(s)	713, 1352
Sse9I	AATT	8 cut(s)	271, 315, 832, 841, 883, 1203, 1227, 1380
SspMI	CTAG	1 cut(s)	188
SstI	GAGCTC	1 cut(s)	462
StyD4I	CCNGG	4 cut(s)	424, 793, 986, 1147
StyI	CCWWGG	5 cut(s)	81, 117, 327, 825, 1222
TaaI	ACNGT	3 cut(s)	46, 448, 1068
TaiI	ACGT	4 cut(s)	11, 126, 662, 902
TaqI	TCGA	7 cut(s)	195, 204, 360, 471, 663, 809, 1153
TasI	AATT	8 cut(s)	271, 315, 832, 841, 883, 1203, 1227, 1380
TatI	WGTACW	1 cut(s)	411
TauI	GCSGC	6 cut(s)	62, 74, 239, 423, 995, 1126
TfiI	GAWTC	1 cut(s)	604
Tru1I	TTAA	4 cut(s)	15, 158, 552, 1011
Tru9I	TTAA	4 cut(s)	15, 158, 552, 1011
TscAI	CASTG	3 cut(s)	51, 383, 642
TseFI	GTSAC	2 cut(s)	289, 1030
TseI	GCWGC	2 cut(s)	821, 1391
Tsp45I	GTSAC	2 cut(s)	289, 1030
TspDTI	ATGAA	6 cut(s)	17, 100, 176, 696, 1045, 1292
TspGWI	ACGGA	3 cut(s)	55, 310, 378
TspRI	CASTG	3 cut(s)	51, 383, 642
Tth111I	GACNNNGTC	2 cut(s)	365, 1036
VneI	GTGCAC	1 cut(s)	1163
VpaK11BI	GGWCC	3 cut(s)	621, 688, 924
XapI	RAATTY	4 cut(s)	271, 315, 841, 1203
XceI	RCATGY	1 cut(s)	1177
XcmI	CCANNNNNNNNNTGG	1 cut(s)	934
XmnI	GAANNNNTTC	2 cut(s)	8, 578
XspI	CTAG	1 cut(s)	188
ZraI	GACGTC	1 cut(s)	124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.