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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0496501 |
| rosa_roxburghii | Rroxscaffold_4G00310810 |
| rosa_samantha | Rh1DG234800 Rh4AG152600 Rh4BG154800 Rh5BG372800 Rh5BG459400 Rh5CG481800 Rh6AG277900 Rh6CG087100 Rh6DG222500 Rh7AG362800 Rh7AG465100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 50 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 125, 184 |
| AgsI | TTSAA | 5 cut(s) | 86, 153, 406, 478, 487 |
| AhlI | ACTAGT | 1 cut(s) | 454 |
| AluBI | AGCT | 8 cut(s) | 39, 47, 198, 205, 278, 285, 376, 415 |
| AluI | AGCT | 8 cut(s) | 39, 47, 198, 205, 278, 285, 376, 415 |
| Alw26I | GTCTC | 2 cut(s) | 260, 352 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 54, 482 |
| AspS9I | GGNCC | 1 cut(s) | 7 |
| AvaII | GGWCC | 1 cut(s) | 7 |
| BccI | CCATC | 1 cut(s) | 296 |
| BclI | TGATCA | 1 cut(s) | 78 |
| BcoDI | GTCTC | 2 cut(s) | 260, 352 |
| BcuI | ACTAGT | 1 cut(s) | 454 |
| BfaI | CTAG | 4 cut(s) | 195, 446, 455, 514 |
| BglII | AGATCT | 1 cut(s) | 230 |
| Bme18I | GGWCC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 1 cut(s) | 7 |
| BmsI | GCATC | 1 cut(s) | 439 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 176, 208, 256, 288 |
| BpmI | CTGGAG | 1 cut(s) | 258 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 125, 184 |
| Bse1I | ACTGG | 1 cut(s) | 17 |
| BseGI | GGATG | 6 cut(s) | 37, 208, 215, 288, 295, 331 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 125, 184 |
| BseMII | CTCAG | 4 cut(s) | 241, 271, 321, 440 |
| BseNI | ACTGG | 1 cut(s) | 17 |
| BsiSI | CCGG | 1 cut(s) | 410 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 125, 184 |
| BsmAI | GTCTC | 2 cut(s) | 260, 352 |
| BsmBI | CGTCTC | 1 cut(s) | 352 |
| Bsp143I | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| BspCNI | CTCAG | 4 cut(s) | 240, 270, 320, 439 |
| BsrI | ACTGG | 1 cut(s) | 17 |
| BssMI | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| Bst4CI | ACNGT | 1 cut(s) | 138 |
| Bst6I | CTCTTC | 3 cut(s) | 250, 306, 330 |
| BstDEI | CTNAG | 7 cut(s) | 227, 257, 307, 372, 377, 426, 437 |
| BstF5I | GGATG | 6 cut(s) | 37, 208, 215, 288, 295, 331 |
| BstKTI | GATC | 5 cut(s) | 81, 233, 263, 313, 339 |
| BstMAI | GTCTC | 2 cut(s) | 260, 352 |
| BstMBI | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| BstX2I | RGATCY | 1 cut(s) | 230 |
| BstYI | RGATCY | 1 cut(s) | 230 |
| BtsCI | GGATG | 6 cut(s) | 37, 208, 215, 288, 295, 331 |
| Cfr13I | GGNCC | 1 cut(s) | 7 |
| CviAII | CATG | 3 cut(s) | 22, 59, 499 |
| DdeI | CTNAG | 7 cut(s) | 227, 257, 307, 372, 377, 426, 437 |
| DpnI | GATC | 5 cut(s) | 80, 232, 262, 312, 338 |
| DpnII | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| Eam1104I | CTCTTC | 3 cut(s) | 250, 306, 330 |
| EarI | CTCTTC | 3 cut(s) | 250, 306, 330 |
| Eco47I | GGWCC | 1 cut(s) | 7 |
| EcoO109I | RGGNCCY | 1 cut(s) | 7 |
| Esp3I | CGTCTC | 1 cut(s) | 352 |
| FaeI | CATG | 3 cut(s) | 25, 62, 502 |
| FaiI | YATR | 6 cut(s) | 23, 42, 60, 74, 500, 508 |
| FatI | CATG | 3 cut(s) | 21, 58, 498 |
| FbaI | TGATCA | 1 cut(s) | 78 |
| FokI | GGATG | 6 cut(s) | 44, 195, 202, 275, 282, 318 |
| FspBI | CTAG | 4 cut(s) | 195, 446, 455, 514 |
| GsuI | CTGGAG | 1 cut(s) | 258 |
| HapII | CCGG | 1 cut(s) | 410 |
| Hin1II | CATG | 3 cut(s) | 25, 62, 502 |
| HindIII | AAGCTT | 2 cut(s) | 203, 374 |
| HinfI | GANTC | 4 cut(s) | 68, 103, 166, 449 |
| HpaII | CCGG | 1 cut(s) | 410 |
| Hpy188I | TCNGA | 5 cut(s) | 230, 260, 310, 336, 352 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 403 |
| HpyCH4III | ACNGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 2 cut(s) | 384, 510 |
| HpyF3I | CTNAG | 7 cut(s) | 227, 257, 307, 372, 377, 426, 437 |
| Hsp92II | CATG | 3 cut(s) | 25, 62, 502 |
| Ksp22I | TGATCA | 1 cut(s) | 78 |
| Kzo9I | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| LmnI | GCTCC | 5 cut(s) | 44, 203, 283, 290, 412 |
| LpnPI | CCDG | 5 cut(s) | 30, 78, 141, 288, 423 |
| LweI | GCATC | 1 cut(s) | 439 |
| MaeI | CTAG | 4 cut(s) | 195, 446, 455, 514 |
| MalI | GATC | 5 cut(s) | 80, 232, 262, 312, 338 |
| MboI | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| MboII | GAAGA | 5 cut(s) | 225, 237, 293, 317, 425 |
| MflI | RGATCY | 1 cut(s) | 230 |
| MluCI | AATT | 2 cut(s) | 50, 340 |
| MlyI | GAGTC | 2 cut(s) | 62, 97 |
| MmeI | TCCRAC | 2 cut(s) | 124, 131 |
| MroXI | GAANNNNTTC | 2 cut(s) | 54, 482 |
| MseI | TTAA | 3 cut(s) | 122, 171, 491 |
| MspI | CCGG | 1 cut(s) | 410 |
| NdeII | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| NlaIII | CATG | 3 cut(s) | 25, 62, 502 |
| PdmI | GAANNNNTTC | 2 cut(s) | 54, 482 |
| PfeI | GAWTC | 2 cut(s) | 166, 449 |
| PleI | GAGTC | 2 cut(s) | 62, 97 |
| PpsI | GAGTC | 2 cut(s) | 62, 97 |
| PpuMI | RGGWCCY | 1 cut(s) | 7 |
| Psp5II | RGGWCCY | 1 cut(s) | 7 |
| PspPI | GGNCC | 1 cut(s) | 7 |
| PspPPI | RGGWCCY | 1 cut(s) | 7 |
| PsuI | RGATCY | 1 cut(s) | 230 |
| SaqAI | TTAA | 3 cut(s) | 122, 171, 491 |
| Sau3AI | GATC | 5 cut(s) | 78, 230, 260, 310, 336 |
| Sau96I | GGNCC | 1 cut(s) | 7 |
| SchI | GAGTC | 2 cut(s) | 62, 97 |
| SfaNI | GCATC | 1 cut(s) | 439 |
| SinI | GGWCC | 1 cut(s) | 7 |
| SpeI | ACTAGT | 1 cut(s) | 454 |
| Sse9I | AATT | 2 cut(s) | 50, 340 |
| SspMI | CTAG | 4 cut(s) | 195, 446, 455, 514 |
| TaaI | ACNGT | 1 cut(s) | 138 |
| TaqI | TCGA | 4 cut(s) | 27, 183, 263, 313 |
| TasI | AATT | 2 cut(s) | 50, 340 |
| TfiI | GAWTC | 2 cut(s) | 166, 449 |
| Tru1I | TTAA | 3 cut(s) | 122, 171, 491 |
| Tru9I | TTAA | 3 cut(s) | 122, 171, 491 |
| TspDTI | ATGAA | 5 cut(s) | 17, 47, 129, 197, 407 |
| VpaK11BI | GGWCC | 1 cut(s) | 7 |
| XapI | RAATTY | 1 cut(s) | 50 |
| XmnI | GAANNNNTTC | 2 cut(s) | 54, 482 |
| XspI | CTAG | 4 cut(s) | 195, 446, 455, 514 |