Rh6DG294700

Peptide transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
49590049 .. 49593775
3727 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG294700.1

Sequence Viewer

Length: 1464 bp
ATGTCCTTATTGACGCTAGCAGTGTCACTCCCTGCCCTAAGACCACCATCATGCGACCACGGAATTAAACTTGAAGATTGTGAGAGAAGAGCCTCCCCATTCCAAGTGGGCATATTCTACTGTGGATTGTACATCATTGCACTCGGAACTGGTGGTACCAAGCCAAACATCTCAACCATGGGTGCAGACCAATTTGATGAGTTTGAGCCTAAAGAGAGGATCCAAAAACTCTCCTTCTTCAACTGGTGGATGTTCAGCATTTTCTTTGGCACACTTTTCTCAAACACCATCTTGATTTACATTCAAGACAATGTGGGGTGGGCACTTGGCTATGGACTTCCAACAATTGGCCTTGCACTTTCCATTTTGGTGTTTTTGGTGGGTACTAGGTTTTATAGGCACAAATTGCCTTCAGAGAGTCCCTTCAGTAGGATAGCTCATGTGCTTGTGGCGTTTATAAGGAAGTGGAGGGTTCCTGTCCCAGATGACCCAAAGGAGCTTCATGAGCTGAGCTTGGAAGAGTACACAAACTCCGAGAAATTCAGAATTGATCACTCCCCTTCATTACGGTTTCTTGACAAAGCAGCTGTAAAGAGTGGACCAACCTCACCATGGATACTATGTCCAGTGACCCAAGTCGAAGAAACCAAGCAAATGATCAAAATGGTTCCAATTTTGATTGCAACATTTTTACCAAGCATGATGTTAGCTCAAGGAGGAACTCTCTTTGTCAAACAAGGAATTACACTAGATAGAAGCATTGGACCACATTTTGATATTCCTCCAGCATGTCTCTCAGCATTTGTAACAATCTTCATGCTGATAAGCCTTGTGCTCTACGATCGCTACTTTGTTCCGGTGGTGCGGAAATATACGAAGAACCCTAGAGGGATCACACTGCTGCAGAGACTAGGCATTGGCCTTGTGTTGCACATCATCATCTTGATGACAGCTTTCTTCGCTGAAAGACGAAGGCTAAGTGTTATACAAGAAAATAAACTGTTTGGGAAAAGGGACACAGTTCCTCTCACAATTTTCATTCTCTTTCCTCAGTTTGCTTTGGCTGGGATTGCTGACACCTTTGTGGAAGTTGCAAAGATAGAGTTTTTCTATGACCAAGCACCACATGGCATGAAGAGCTTGGGAACCTCGTACTTCACTACTAGCTTGGGAATTGGGAGTTTCCTTAGTAGTTTTCTTCTATCAACAGTTGCAGACTTCACCAAGAAACATGCCAAAAGGGGTTGGATTTTGGATAACCTAAACATCTCTCATCTAGACTACTACTATCTGTTCTTGGCTAGCCTGAGCTTTCTCAACTTGCTCTTCTTTCTCCTGGTTTCCAAGTACTATGTTTATAATGCAGACGCGAGGGAATCTAAGGGAGACTTTGCCGTGGAAACTTTGCCTAGCAAAACTTCAGCTCAAGATCTTAAGGATGCCTCAAATAGTCTCTATTTTTGA

Protein Analysis

487

Amino Acids

55.04

Weight (kDa)

8.95

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 2 - 417 3.7e-96 POT family
MFS_1 PF07690 46 - 397 1.4e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 458, 1359
Acc65I GGTACC 1 cut(s) 155
AccB1I GGYRCC 1 cut(s) 155
AccB7I CCANNNNNTGG 1 cut(s) 347
AccII CGCG 1 cut(s) 1370
AciI CCGC 1 cut(s) 865
AclWI GGATC 3 cut(s) 214, 227, 899
AcsI RAATTY 1 cut(s) 539
AcuI CTGAAG 3 cut(s) 396, 409, 1404
AfaI GTAC 6 cut(s) 131, 157, 385, 524, 1154, 1349
AfiI CCNNNNNNNGG 3 cut(s) 347, 429, 612
AflII CTTAAG 1 cut(s) 1433
AgsI TTSAA 3 cut(s) 74, 241, 305
AjnI CCWGG 1 cut(s) 1335
AleI CACNNNNGTG 1 cut(s) 1082
Alw21I GWGCWC 1 cut(s) 837
Alw26I GTCTC 4 cut(s) 797, 901, 1380, 1457
AlwI GGATC 3 cut(s) 214, 227, 899
AoxI GGCC 2 cut(s) 349, 919
ApeKI GCWGC 2 cut(s) 584, 901
ApoI RAATTY 1 cut(s) 539
Asp718I GGTACC 1 cut(s) 155
AspS9I GGNCC 2 cut(s) 599, 764
AsuHPI GGTGA 2 cut(s) 600, 1213
AsuNHI GCTAGC 2 cut(s) 16, 1301
AvaII GGWCC 2 cut(s) 599, 764
BaeGI GKGCMC 1 cut(s) 325
BamHI GGATCC 1 cut(s) 219
BanI GGYRCC 1 cut(s) 155
Bbv12I GWGCWC 1 cut(s) 837
BbvI GCAGC 2 cut(s) 596, 888
BccI CCATC 2 cut(s) 55, 296
BceAI ACGGC 1 cut(s) 1379
BciT130I CCWGG 1 cut(s) 1337
BciVI GTATCC 1 cut(s) 609
BclI TGATCA 2 cut(s) 550, 657
BcoDI GTCTC 4 cut(s) 797, 901, 1380, 1457
BfaI CTAG 9 cut(s) 17, 387, 749, 885, 911, 1164, 1277, 1302, 1410
BfmI CTRYAG 1 cut(s) 902
BfrI CTTAAG 1 cut(s) 1433
BfuI GTATCC 1 cut(s) 609
BglII AGATCT 1 cut(s) 1429
BisI GCNGC 2 cut(s) 585, 902
BlpI GCTNAGC 1 cut(s) 509
BlsI GCNGC 2 cut(s) 586, 903
BmcAI AGTACT 1 cut(s) 1349
Bme1390I CCNGG 1 cut(s) 1337
Bme18I GGWCC 2 cut(s) 599, 764
BmgT120I GGNCC 2 cut(s) 599, 764
BmiI GGNNCC 5 cut(s) 157, 221, 474, 669, 1147
BmrFI CCNGG 1 cut(s) 1337
BmsI GCATC 1 cut(s) 1429
BmtI GCTAGC 2 cut(s) 20, 1305
BoxI GACNNNNGTC 1 cut(s) 635
BplI GAGNNNNNCTC 2 cut(s) 708, 740
BpmI CTGGAG 1 cut(s) 768
Bpu10I CCTNAGC 1 cut(s) 1307
Bpu1102I GCTNAGC 1 cut(s) 509
BpuEI CTTGAG 2 cut(s) 696, 1410
BsaJI CCNNGG 4 cut(s) 58, 177, 611, 1395
BsaWI WCCGGW 1 cut(s) 856
BsaXI ACNNNNNCTCC 2 cut(s) 515, 545
Bsc4I CCNNNNNNNGG 3 cut(s) 347, 429, 612
Bse1I ACTGG 3 cut(s) 154, 248, 626
Bse3DI GCAATG 1 cut(s) 135
BseBI CCWGG 1 cut(s) 1337
BseDI CCNNGG 4 cut(s) 58, 177, 611, 1395
BseGI GGATG 2 cut(s) 255, 1444
BseLI CCNNNNNNNGG 3 cut(s) 347, 429, 612
BseMI GCAATG 1 cut(s) 135
BseMII CTCAG 4 cut(s) 500, 810, 1064, 1298
BseNI ACTGG 3 cut(s) 154, 248, 626
BseSI GKGCMC 1 cut(s) 325
BseXI GCAGC 2 cut(s) 596, 888
BseYI CCCAGC 1 cut(s) 1064
BsgI GTGCAG 1 cut(s) 204
Bsh1236I CGCG 1 cut(s) 1370
Bsh1285I CGRYCG 1 cut(s) 844
BshFI GGCC 2 cut(s) 351, 921
BshNI GGYRCC 1 cut(s) 155
BsiEI CGRYCG 1 cut(s) 844
BsiHKAI GWGCWC 1 cut(s) 837
BsiSI CCGG 1 cut(s) 857
BslFI GGGAC 3 cut(s) 405, 464, 1028
BslI CCNNNNNNNGG 3 cut(s) 347, 429, 612
BsmAI GTCTC 4 cut(s) 797, 901, 1380, 1457
BsmFI GGGAC 3 cut(s) 405, 464, 1028
BsnI GGCC 2 cut(s) 351, 921
Bsp1286I GDGCHC 2 cut(s) 325, 837
Bsp1407I TGTACA 1 cut(s) 129
Bsp143I GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
Bsp1720I GCTNAGC 1 cut(s) 509
Bsp19I CCATGG 2 cut(s) 177, 611
BspACI CCGC 1 cut(s) 865
BspANI GGCC 2 cut(s) 351, 921
BspCNI CTCAG 4 cut(s) 501, 809, 1063, 1299
BspFNI CGCG 1 cut(s) 1370
BspHI TCATGA 1 cut(s) 502
BspLI GGNNCC 5 cut(s) 157, 221, 474, 669, 1147
BspMAI CTGCAG 1 cut(s) 906
BspOI GCTAGC 2 cut(s) 20, 1305
BspPI GGATC 3 cut(s) 214, 227, 899
BspQI GCTCTTC 3 cut(s) 82, 1130, 1331
BspT107I GGYRCC 1 cut(s) 155
BspTI CTTAAG 1 cut(s) 1433
BsrDI GCAATG 1 cut(s) 135
BsrGI TGTACA 1 cut(s) 129
BsrI ACTGG 3 cut(s) 154, 248, 626
BssECI CCNNGG 4 cut(s) 58, 177, 611, 1395
BssMI GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
BssT1I CCWWGG 2 cut(s) 177, 611
Bst2UI CCWGG 1 cut(s) 1337
Bst4CI ACNGT 5 cut(s) 122, 570, 1002, 1021, 1210
Bst6I CTCTTC 4 cut(s) 82, 513, 1130, 1331
BstAFI CTTAAG 1 cut(s) 1433
BstAPI GCANNNNNTGC 1 cut(s) 406
BstAUI TGTACA 1 cut(s) 129
BstC8I GCNNGC 2 cut(s) 18, 1303
BstDEI CTNAG 8 cut(s) 38, 509, 796, 977, 1050, 1187, 1307, 1380
BstDSI CCRYGG 4 cut(s) 58, 177, 611, 1395
BstENI CCTNNNNNAGG 1 cut(s) 427
BstF5I GGATG 2 cut(s) 255, 1444
BstFNI CGCG 1 cut(s) 1370
BstKTI GATC 6 cut(s) 222, 553, 660, 844, 894, 1432
BstMAI GTCTC 4 cut(s) 797, 901, 1380, 1457
BstMBI GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
BstMCI CGRYCG 1 cut(s) 844
BstMWI GCNNNNNNNGC 5 cut(s) 406, 505, 959, 1070, 1137
BstNI CCWGG 1 cut(s) 1337
BstNSI RCATGY 2 cut(s) 792, 1235
BstPAI GACNNNNGTC 1 cut(s) 635
BstSCI CCNGG 1 cut(s) 1335
BstSFI CTRYAG 1 cut(s) 902
BstSLI GKGCMC 1 cut(s) 325
BstUI CGCG 1 cut(s) 1370
BstV1I GCAGC 2 cut(s) 596, 888
BstX2I RGATCY 2 cut(s) 219, 1429
BstYI RGATCY 2 cut(s) 219, 1429
BsuI GTATCC 1 cut(s) 609
BsuRI GGCC 2 cut(s) 351, 921
BtgI CCRYGG 4 cut(s) 58, 177, 611, 1395
BtsCI GGATG 2 cut(s) 255, 1444
BtsI GCAGTG 2 cut(s) 27, 896
BtsIMutI CAGTG 3 cut(s) 27, 633, 896
Cac8I GCNNGC 2 cut(s) 18, 1303
CciI TCATGA 1 cut(s) 502
Cfr13I GGNCC 2 cut(s) 599, 764
CseI GACGC 2 cut(s) 22, 1376
Csp6I GTAC 6 cut(s) 130, 156, 384, 523, 1153, 1348
CviQI GTAC 6 cut(s) 130, 156, 384, 523, 1153, 1348
DdeI CTNAG 8 cut(s) 38, 509, 796, 977, 1050, 1187, 1307, 1380
DpnI GATC 6 cut(s) 221, 552, 659, 843, 893, 1431
DpnII GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
Eam1104I CTCTTC 4 cut(s) 82, 513, 1130, 1331
EarI CTCTTC 4 cut(s) 82, 513, 1130, 1331
Eco130I CCWWGG 2 cut(s) 177, 611
Eco47I GGWCC 2 cut(s) 599, 764
Eco57I CTGAAG 3 cut(s) 396, 409, 1404
EcoNI CCTNNNNNAGG 1 cut(s) 427
EcoRII CCWGG 1 cut(s) 1335
EcoT14I CCWWGG 2 cut(s) 177, 611
ErhI CCWWGG 2 cut(s) 177, 611
FalI AAGNNNNNCTT 2 cut(s) 1373, 1405
FaqI GGGAC 3 cut(s) 405, 464, 1028
FbaI TGATCA 2 cut(s) 550, 657
Fnu4HI GCNGC 2 cut(s) 585, 902
FokI GGATG 2 cut(s) 262, 1451
Fsp4HI GCNGC 2 cut(s) 585, 902
FspBI CTAG 9 cut(s) 17, 387, 749, 885, 911, 1164, 1277, 1302, 1410
GluI GCNGC 2 cut(s) 585, 902
GsaI CCCAGC 1 cut(s) 1068
GsuI CTGGAG 1 cut(s) 768
HaeIII GGCC 2 cut(s) 351, 921
HapII CCGG 1 cut(s) 857
HgaI GACGC 2 cut(s) 22, 1376
HinfI GANTC 2 cut(s) 418, 1376
HpaII CCGG 1 cut(s) 857
HphI GGTGA 2 cut(s) 600, 1213
Hpy166II GTNNAC 2 cut(s) 525, 599
Hpy188I TCNGA 4 cut(s) 146, 415, 535, 545
Hpy188III TCNNGA 7 cut(s) 292, 305, 503, 575, 943, 1277, 1427
Hpy8I GTNNAC 2 cut(s) 525, 599
HpyAV CCTTC 5 cut(s) 244, 420, 433, 570, 966
HpyCH4III ACNGT 5 cut(s) 122, 570, 1002, 1021, 1210
HpyCH4V TGCA 9 cut(s) 140, 185, 356, 683, 904, 931, 1094, 1214, 1364
HpyF10VI GCNNNNNNNGC 5 cut(s) 406, 505, 959, 1070, 1137
HpyF3I CTNAG 8 cut(s) 38, 509, 796, 977, 1050, 1187, 1307, 1380
KpnI GGTACC 1 cut(s) 159
Ksp22I TGATCA 2 cut(s) 550, 657
Kzo9I GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
LguI GCTCTTC 3 cut(s) 82, 1130, 1331
LmnI GCTCC 1 cut(s) 496
Lsp1109I GCAGC 2 cut(s) 596, 888
LweI GCATC 1 cut(s) 1429
MaeI CTAG 9 cut(s) 17, 387, 749, 885, 911, 1164, 1277, 1302, 1410
MaeIII GTNAC 3 cut(s) 24, 628, 805
MalI GATC 6 cut(s) 221, 552, 659, 843, 893, 1431
MboI GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
MfeI CAATTG 1 cut(s) 345
MflI RGATCY 2 cut(s) 219, 1429
MhlI GDGCHC 2 cut(s) 325, 837
MlyI GAGTC 1 cut(s) 427
MmeI TCCRAC 2 cut(s) 365, 1226
MseI TTAA 2 cut(s) 66, 1434
MslI CAYNNNNRTG 4 cut(s) 49, 368, 944, 1082
MspA1I CMGCKG 1 cut(s) 587
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 1 cut(s) 857
MspR9I CCNGG 1 cut(s) 1337
MunI CAATTG 1 cut(s) 345
MvaI CCWGG 1 cut(s) 1337
MvnI CGCG 1 cut(s) 1370
MwoI GCNNNNNNNGC 5 cut(s) 406, 505, 959, 1070, 1137
NcoI CCATGG 2 cut(s) 177, 611
NdeII GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
NheI GCTAGC 2 cut(s) 16, 1301
NlaIV GGNNCC 5 cut(s) 157, 221, 474, 669, 1147
NmuCI GTSAC 2 cut(s) 24, 628
NspI RCATGY 2 cut(s) 792, 1235
OliI CACNNNNGTG 1 cut(s) 1082
PagI TCATGA 1 cut(s) 502
PciSI GCTCTTC 3 cut(s) 82, 1130, 1331
PfeI GAWTC 1 cut(s) 1376
PflMI CCANNNNNTGG 1 cut(s) 347
PkrI GCNGC 2 cut(s) 586, 903
Ple19I CGATCG 1 cut(s) 844
PleI GAGTC 1 cut(s) 426
PpsI GAGTC 1 cut(s) 426
PshAI GACNNNNGTC 1 cut(s) 635
PsiI TTATAA 2 cut(s) 458, 1359
Psp6I CCWGG 1 cut(s) 1335
PspFI CCCAGC 1 cut(s) 1064
PspGI CCWGG 1 cut(s) 1335
PspN4I GGNNCC 5 cut(s) 157, 221, 474, 669, 1147
PspPI GGNCC 2 cut(s) 599, 764
PsrI GAACNNNNNNTAC 2 cut(s) 139, 171
PstI CTGCAG 1 cut(s) 906
PsuI RGATCY 2 cut(s) 219, 1429
PvuI CGATCG 1 cut(s) 844
PvuII CAGCTG 1 cut(s) 587
RsaI GTAC 6 cut(s) 131, 157, 385, 524, 1154, 1349
RsaNI GTAC 6 cut(s) 130, 156, 384, 523, 1153, 1348
RseI CAYNNNNRTG 4 cut(s) 49, 368, 944, 1082
SapI GCTCTTC 3 cut(s) 82, 1130, 1331
SaqAI TTAA 2 cut(s) 66, 1434
SatI GCNGC 2 cut(s) 585, 902
Sau3AI GATC 6 cut(s) 219, 550, 657, 841, 891, 1429
Sau96I GGNCC 2 cut(s) 599, 764
ScaI AGTACT 1 cut(s) 1349
SchI GAGTC 1 cut(s) 427
ScrFI CCNGG 1 cut(s) 1337
SduI GDGCHC 2 cut(s) 325, 837
SfaNI GCATC 1 cut(s) 1429
SfcI CTRYAG 1 cut(s) 902
SinI GGWCC 2 cut(s) 599, 764
SmiMI CAYNNNNRTG 4 cut(s) 49, 368, 944, 1082
SmlI CTYRAG 3 cut(s) 711, 1425, 1433
SmoI CTYRAG 3 cut(s) 711, 1425, 1433
SsiI CCGC 1 cut(s) 865
SspMI CTAG 9 cut(s) 17, 387, 749, 885, 911, 1164, 1277, 1302, 1410
StyD4I CCNGG 1 cut(s) 1335
StyI CCWWGG 2 cut(s) 177, 611
TaaI ACNGT 5 cut(s) 122, 570, 1002, 1021, 1210
TaqI TCGA 1 cut(s) 639
TatI WGTACW 3 cut(s) 129, 522, 1347
TfiI GAWTC 1 cut(s) 1376
Tru1I TTAA 2 cut(s) 66, 1434
Tru9I TTAA 2 cut(s) 66, 1434
TscAI CASTG 3 cut(s) 27, 633, 903
TseFI GTSAC 2 cut(s) 24, 628
TseI GCWGC 2 cut(s) 584, 901
Tsp45I GTSAC 2 cut(s) 24, 628
TspDTI ATGAA 5 cut(s) 491, 552, 805, 1027, 1148
TspGWI ACGGA 1 cut(s) 75
TspRI CASTG 3 cut(s) 27, 633, 903
Van91I CCANNNNNTGG 1 cut(s) 347
Vha464I CTTAAG 1 cut(s) 1433
VpaK11BI GGWCC 2 cut(s) 599, 764
XagI CCTNNNNNAGG 1 cut(s) 427
XapI RAATTY 1 cut(s) 539
XbaI TCTAGA 1 cut(s) 1276
XceI RCATGY 2 cut(s) 792, 1235
XcmI CCANNNNNNNNNTGG 2 cut(s) 609, 1124
XspI CTAG 9 cut(s) 17, 387, 749, 885, 911, 1164, 1277, 1302, 1410
ZrmI AGTACT 1 cut(s) 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.