Rh6DG350700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
55111805 .. 55112020
216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG350700.1

Sequence Viewer

Length: 216 bp
ATGGGAGGAGGAATGGAGGCAAACAAGAACAGGTTCGTGGAGGAGTGGGGCGCAGTCAGAGAAAATCTGGAGCACAACTTCCGCTGGACTCGCCGCAACTTTGCCATCATCGGAATCTTTGGCATCGCTATCCCCGTCTTAGTCTACAAGGGCATCGTCCGAGAATTCCATATGCAAGATGAGGAAGCAGGCAGACCATACAGGAAGTTTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

8.37

Weight (kDa)

9.39

Isoelectric Point (pI)

32.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012012)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 144
AciI CCGC 2 cut(s) 82, 94
AcsI RAATTY 1 cut(s) 164
Alw21I GWGCWC 1 cut(s) 75
ApoI RAATTY 1 cut(s) 164
Asp700I GAANNNNTTC 1 cut(s) 32
AspLEI GCGC 1 cut(s) 53
Bbv12I GWGCWC 1 cut(s) 75
BccI CCATC 1 cut(s) 113
BisI GCNGC 1 cut(s) 94
BlsI GCNGC 1 cut(s) 95
BmsI GCATC 2 cut(s) 132, 162
BpmI CTGGAG 1 cut(s) 89
BseRI GAGGAG 2 cut(s) 21, 56
BsiHKAI GWGCWC 1 cut(s) 75
Bsp1286I GDGCHC 1 cut(s) 75
BspACI CCGC 2 cut(s) 82, 94
BstC8I GCNNGC 1 cut(s) 190
BstDEI CTNAG 1 cut(s) 139
BstHHI GCGC 1 cut(s) 53
BstMWI GCNNNNNNNGC 1 cut(s) 90
BtgZI GCGATG 1 cut(s) 109
Cac8I GCNNGC 1 cut(s) 190
CfoI GCGC 1 cut(s) 53
DdeI CTNAG 1 cut(s) 139
EcoRI GAATTC 1 cut(s) 164
FaiI YATR 3 cut(s) 171, 173, 199
FauNDI CATATG 1 cut(s) 171
FblI GTMKAC 1 cut(s) 144
Fnu4HI GCNGC 1 cut(s) 94
Fsp4HI GCNGC 1 cut(s) 94
GlaI GCGC 1 cut(s) 52
GluI GCNGC 1 cut(s) 94
GsuI CTGGAG 1 cut(s) 89
HhaI GCGC 1 cut(s) 53
Hin6I GCGC 1 cut(s) 51
HinP1I GCGC 1 cut(s) 51
HinfI GANTC 2 cut(s) 88, 114
Hpy166II GTNNAC 1 cut(s) 145
Hpy188I TCNGA 3 cut(s) 59, 113, 161
Hpy188III TCNNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 145
HpyCH4V TGCA 1 cut(s) 175
HpyF10VI GCNNNNNNNGC 1 cut(s) 90
HpyF3I CTNAG 1 cut(s) 139
HspAI GCGC 1 cut(s) 51
LmnI GCTCC 1 cut(s) 70
LpnPI CCDG 5 cut(s) 16, 53, 70, 174, 187
LweI GCATC 2 cut(s) 132, 162
MhlI GDGCHC 1 cut(s) 75
MluCI AATT 1 cut(s) 164
MlyI GAGTC 1 cut(s) 82
MnlI CCTC 3 cut(s) 10, 34, 175
MroXI GAANNNNTTC 1 cut(s) 32
MspA1I CMGCKG 1 cut(s) 84
MwoI GCNNNNNNNGC 1 cut(s) 90
NdeI CATATG 1 cut(s) 171
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 1 cut(s) 114
PkrI GCNGC 1 cut(s) 95
PleI GAGTC 1 cut(s) 82
PpsI GAGTC 1 cut(s) 82
SatI GCNGC 1 cut(s) 94
SchI GAGTC 1 cut(s) 82
SduI GDGCHC 1 cut(s) 75
SetI ASST 1 cut(s) 35
SfaNI GCATC 2 cut(s) 132, 162
Sse9I AATT 1 cut(s) 164
SsiI CCGC 2 cut(s) 82, 94
TasI AATT 1 cut(s) 164
TauI GCSGC 1 cut(s) 96
TfiI GAWTC 1 cut(s) 114
XapI RAATTY 1 cut(s) 164
XmiI GTMKAC 1 cut(s) 144
XmnI GAANNNNTTC 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.