Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0015782

Physical Location & Seq

Genomic Coordinates Forward (+)

2294889 .. 2299340

Gene Structure 4452 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG033300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGGGGAACTGCAACGTGTGCGTCAGAGCTGACGTCATCGAGAGCCAGGGCACCTACCAGGCGAACAACAAGAAGAAGAAGGCCGGGGAGCGGCGGCCGAACCCGTTCTCCGAGGACGCGATCCGGTCGCCGGCGCCGATCCGAGTGCTCAAGGACGTGATTCCGCTCGGTCACCGGACTCGGATCGGCGACAAGTACATACTGGGCCGGGAGCTGGGCCGCGGGGAGTTCGGCATCACCTATCTCTGTACGGACCGCGAGACTAAAGAAGCTCTGGCCTGCAAGTCCATCTCCAAACGGAAGCTCCGGACTGCTGTGGATATAGAGGACGTGAGGCGCGAGGTTGCGATAATGTCCAATTTGCCGGAGCATCCGAACATAGTGAAGCTGAAGGCGACCTATGAGGACAACGAGAACGTTCACCTGGTGATGGAGCTCTGCGAAGGAGGCGAGCTTTTCGATAGGATTGTGGCGAGAGGGCACTACAGTGAACGAGCTGCGGCGAACGTAGCCAGGACTGTGGCTGAGGTGGTGAGGATGTGCCATGCGAATGGGGTTATGCACAGGGATTTGAAGCCGGAGAACTTTCTGTTTTCGAATAAGAAAGAGCACTCCCCGCTTAAGGCTATTGATTTTGGGCTCTCTGTGTTTTTCAAGCCTGGGGAGAAGTTTACGGAGATTGTGGGGAGTCCGTACTACATGGCACCCGAGGTTTTGAAGAGGAATTATGGACCCGAGGTTGATATATGGAGCGCCGGAGTGATTCTTTACATTTTGTTATGTGGGGTTCCTCCATTTTGGGCCGAGAGTGAACAGGGTGTGGCTCTTGCAATCTTGAGGGGGGTGATTGATTTCAAGAGGGAACCCTGGCCTCAGATTTCAGAGAGTGCTAAAAGCCTCGTAAGGCAGATGCTCGACCCGGATCCTAAAAAACGCTTGACTGCTCAACAGGTGCTTGAACATCCATGGTTACAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGCCAAGGCTCAAGCAGTTCTCAATAATGAATAGATTTAAAAAGAAGGCCTTACGGGTAATTGATCATTTTATGACTCTCAGTAAAGTATTGGCTAGTATTGCAGTGATATATGATTCACGAAATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010152 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0021700 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048229 GO:0048518 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1902584 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 Pkinase

Protein Analysis

382

Amino Acids

43.24

Weight (kDa)

9.39

Isoelectric Point (pI)

46.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	67 - 324	2.9e-80	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	68 - 320	4.6e-28	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	98 - 212	5.4e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18890 AT1G74740
fragaria_vesca	FvH4_5g15720
malus_domestica	MD06G1186000.v1.1 MD14G1192200.v1.1
prunus_persica	Prupe.5G184800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0180391
rosa_laevigata	RLG00000005271
rosa_multiflora	Rmu_sc0003526.1_g000008
rosa_rugosa	Rorug06G0432800
rosa_samantha	Rh7AG033300 Rh7BG033200 Rh7CG035200 Rh7DG033700
rosa_wichuraiana	Rw7G002780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	36
AccB1I	GGYRCC	3 cut(s)	50, 133, 703
AccBSI	CCGCTC	2 cut(s)	91, 166
AccII	CGCG	4 cut(s)	119, 222, 258, 339
AccIII	TCCGGA	1 cut(s)	306
AciI	CCGC	8 cut(s)	91, 94, 164, 220, 222, 256, 500, 617
AclI	AACGTT	1 cut(s)	417
AclWI	GGATC	5 cut(s)	115, 133, 191, 917, 930
AcoI	YGGCCR	1 cut(s)	95
AcuI	CTGAAG	1 cut(s)	410
AcyI	GRCGYC	2 cut(s)	33, 134
AdeI	CACNNNGTG	1 cut(s)	427
AfaI	GTAC	3 cut(s)	197, 250, 695
AfiI	CCNNNNNNNGG	5 cut(s)	90, 130, 214, 430, 622
AflII	CTTAAG	1 cut(s)	620
AflIII	ACRYGT	1 cut(s)	15
AgsI	TTSAA	5 cut(s)	574, 655, 718, 856, 959
AjiI	CACGTC	2 cut(s)	157, 331
AjnI	CCWGG	6 cut(s)	45, 57, 423, 512, 658, 866
AleI	CACNNNNGTG	1 cut(s)	486
AloI	GAACNNNNNNTCC	2 cut(s)	92, 124
AluBI	AGCT	9 cut(s)	29, 214, 272, 304, 388, 436, 454, 497, 989
AluI	AGCT	9 cut(s)	29, 214, 272, 304, 388, 436, 454, 497, 989
Alw21I	GWGCWC	3 cut(s)	150, 438, 612
Alw26I	GTCTC	1 cut(s)	254
AlwI	GGATC	5 cut(s)	115, 133, 191, 917, 930
Ama87I	CYCGRG	2 cut(s)	707, 734
Aor13HI	TCCGGA	1 cut(s)	306
AoxI	GGCC	9 cut(s)	81, 95, 205, 217, 276, 801, 869, 1019, 1065
ApeKI	GCWGC	1 cut(s)	497
Asp700I	GAANNNNTTC	1 cut(s)	104
AspLEI	GCGC	3 cut(s)	136, 339, 755
AspS9I	GGNCC	5 cut(s)	205, 217, 253, 731, 801
AsuC2I	CCSGG	3 cut(s)	85, 209, 920
AsuHPI	GGTGA	6 cut(s)	164, 229, 413, 439, 544, 856
AsuII	TTCGAA	1 cut(s)	596
AvaI	CYCGRG	2 cut(s)	707, 734
AvaII	GGWCC	2 cut(s)	253, 731
BaeGI	GKGCMC	2 cut(s)	53, 483
BamHI	GGATCC	1 cut(s)	922
BanI	GGYRCC	3 cut(s)	50, 133, 703
BanII	GRGCYC	2 cut(s)	438, 642
Bbv12I	GWGCWC	3 cut(s)	150, 438, 612
BbvCI	CCTCAGC	1 cut(s)	525
BbvI	GCAGC	1 cut(s)	484
BccI	CCATC	2 cut(s)	296, 424
BcgI	CGANNNNNNTGC	2 cut(s)	127, 161
BciT130I	CCWGG	6 cut(s)	47, 59, 425, 514, 660, 868
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	3 cut(s)	85, 209, 920
BcoDI	GTCTC	1 cut(s)	254
BfaI	CTAG	1 cut(s)	1113
BfmI	CTRYAG	1 cut(s)	484
BfoI	RGCGCY	2 cut(s)	137, 756
BfrI	CTTAAG	1 cut(s)	620
BisI	GCNGC	5 cut(s)	92, 95, 220, 498, 501
BlsI	GCNGC	5 cut(s)	93, 96, 221, 499, 502
Bme1390I	CCNGG	9 cut(s)	47, 59, 85, 209, 425, 514, 660, 868, 920
Bme18I	GGWCC	2 cut(s)	253, 731
BmeT110I	CYCGRG	2 cut(s)	707, 734
BmgBI	CACGTC	2 cut(s)	157, 331
BmgT120I	GGNCC	5 cut(s)	205, 217, 253, 731, 801
BmiI	GGNNCC	7 cut(s)	52, 135, 705, 733, 789, 864, 924
BmrFI	CCNGG	9 cut(s)	47, 59, 85, 209, 425, 514, 660, 868, 920
BmrI	ACTGGG	1 cut(s)	212
BmsI	GCATC	3 cut(s)	243, 379, 900
BmuI	ACTGGG	1 cut(s)	212
Bpu10I	CCTNAGC	1 cut(s)	525
Bpu14I	TTCGAA	1 cut(s)	596
BpuEI	CTTGAG	3 cut(s)	134, 856, 1013
BpuMI	CCSGG	3 cut(s)	85, 209, 920
BsaHI	GRCGYC	2 cut(s)	33, 134
BsaWI	WCCGGW	3 cut(s)	123, 174, 306
BsaXI	ACNNNNNCTCC	6 cut(s)	92, 122, 288, 318, 999, 1029
Bsc4I	CCNNNNNNNGG	5 cut(s)	90, 130, 214, 430, 622
Bse118I	RCCGGY	1 cut(s)	130
Bse1I	ACTGG	1 cut(s)	207
BseAI	TCCGGA	1 cut(s)	306
BseBI	CCWGG	6 cut(s)	47, 59, 425, 514, 660, 868
BseGI	GGATG	3 cut(s)	370, 543, 961
BseLI	CCNNNNNNNGG	5 cut(s)	90, 130, 214, 430, 622
BseMII	CTCAG	3 cut(s)	516, 887, 1111
BseNI	ACTGG	1 cut(s)	207
BseSI	GKGCMC	2 cut(s)	53, 483
BseX3I	CGGCCG	1 cut(s)	95
BseXI	GCAGC	1 cut(s)	484
BseYI	CCCAGC	1 cut(s)	214
Bsh1236I	CGCG	4 cut(s)	119, 222, 258, 339
Bsh1285I	CGRYCG	2 cut(s)	98, 128
BshFI	GGCC	9 cut(s)	83, 97, 207, 219, 278, 803, 871, 1021, 1067
BshNI	GGYRCC	3 cut(s)	50, 133, 703
BsiEI	CGRYCG	2 cut(s)	98, 128
BsiHKAI	GWGCWC	3 cut(s)	150, 438, 612
BsiHKCI	CYCGRG	2 cut(s)	707, 734
BslI	CCNNNNNNNGG	5 cut(s)	90, 130, 214, 430, 622
BsmAI	GTCTC	1 cut(s)	254
BsnI	GGCC	9 cut(s)	83, 97, 207, 219, 278, 803, 871, 1021, 1067
BsoBI	CYCGRG	2 cut(s)	707, 734
Bsp119I	TTCGAA	1 cut(s)	596
Bsp1286I	GDGCHC	6 cut(s)	53, 150, 438, 483, 612, 642
Bsp13I	TCCGGA	1 cut(s)	306
Bsp143I	GATC	5 cut(s)	120, 138, 183, 922, 1081
Bsp19I	CCATGG	1 cut(s)	965
BspACI	CCGC	8 cut(s)	91, 94, 164, 220, 222, 256, 500, 617
BspANI	GGCC	9 cut(s)	83, 97, 207, 219, 278, 803, 871, 1021, 1067
BspCNI	CTCAG	3 cut(s)	517, 886, 1110
BspEI	TCCGGA	1 cut(s)	306
BspFNI	CGCG	4 cut(s)	119, 222, 258, 339
BspLI	GGNNCC	7 cut(s)	52, 135, 705, 733, 789, 864, 924
BspPI	GGATC	5 cut(s)	115, 133, 191, 917, 930
BspT104I	TTCGAA	1 cut(s)	596
BspT107I	GGYRCC	3 cut(s)	50, 133, 703
BspTI	CTTAAG	1 cut(s)	620
BsrBI	CCGCTC	2 cut(s)	91, 166
BsrFI	RCCGGY	1 cut(s)	130
BsrI	ACTGG	1 cut(s)	207
BssAI	RCCGGY	1 cut(s)	130
BssMI	GATC	5 cut(s)	120, 138, 183, 922, 1081
BssNI	GRCGYC	2 cut(s)	33, 134
BssT1I	CCWWGG	2 cut(s)	965, 1022
Bst2UI	CCWGG	6 cut(s)	47, 59, 425, 514, 660, 868
Bst4CI	ACNGT	2 cut(s)	488, 520
Bst6I	CTCTTC	1 cut(s)	713
BstACI	GRCGYC	2 cut(s)	33, 134
BstAFI	CTTAAG	1 cut(s)	620
BstAPI	GCANNNNNTGC	1 cut(s)	18
BstBI	TTCGAA	1 cut(s)	596
BstC8I	GCNNGC	3 cut(s)	132, 280, 452
BstDEI	CTNAG	3 cut(s)	525, 873, 1097
BstDSI	CCRYGG	2 cut(s)	220, 965
BstEII	GGTNACC	1 cut(s)	170
BstF5I	GGATG	3 cut(s)	370, 543, 961
BstFNI	CGCG	4 cut(s)	119, 222, 258, 339
BstH2I	RGCGCY	2 cut(s)	137, 756
BstHHI	GCGC	3 cut(s)	136, 339, 755
BstKTI	GATC	5 cut(s)	123, 141, 186, 925, 1084
BstMAI	GTCTC	1 cut(s)	254
BstMBI	GATC	5 cut(s)	120, 138, 183, 922, 1081
BstMCI	CGRYCG	2 cut(s)	98, 128
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 447, 509, 616, 986, 1118
BstNI	CCWGG	6 cut(s)	47, 59, 425, 514, 660, 868
BstPI	GGTNACC	1 cut(s)	170
BstSCI	CCNGG	9 cut(s)	45, 57, 83, 207, 423, 512, 658, 866, 918
BstSFI	CTRYAG	1 cut(s)	484
BstSLI	GKGCMC	2 cut(s)	53, 483
BstUI	CGCG	4 cut(s)	119, 222, 258, 339
BstV1I	GCAGC	1 cut(s)	484
BstX2I	RGATCY	1 cut(s)	922
BstXI	CCANNNNNNTGG	2 cut(s)	520, 551
BstYI	RGATCY	1 cut(s)	922
BstZI	CGGCCG	1 cut(s)	95
BsuRI	GGCC	9 cut(s)	83, 97, 207, 219, 278, 803, 871, 1021, 1067
BtgI	CCRYGG	2 cut(s)	220, 965
BtrI	CACGTC	2 cut(s)	157, 331
BtsCI	GGATG	3 cut(s)	370, 543, 961
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	2 cut(s)	493, 1128
Cac8I	GCNNGC	3 cut(s)	132, 280, 452
CfoI	GCGC	3 cut(s)	136, 339, 755
Cfr10I	RCCGGY	1 cut(s)	130
Cfr13I	GGNCC	5 cut(s)	205, 217, 253, 731, 801
Cfr42I	CCGCGG	1 cut(s)	223
CpoI	CGGWCCG	1 cut(s)	253
CseI	GACGC	2 cut(s)	10, 125
CsiI	ACCWGGT	1 cut(s)	423
Csp6I	GTAC	3 cut(s)	196, 249, 694
CspI	CGGWCCG	1 cut(s)	253
CviAII	CATG	3 cut(s)	545, 700, 966
CviQI	GTAC	3 cut(s)	196, 249, 694
DdeI	CTNAG	3 cut(s)	525, 873, 1097
DinI	GGCGCC	1 cut(s)	135
DpnI	GATC	5 cut(s)	122, 140, 185, 924, 1083
DpnII	GATC	5 cut(s)	120, 138, 183, 922, 1081
DraI	TTTAAA	1 cut(s)	1057
DraIII	CACNNNGTG	1 cut(s)	427
EaeI	YGGCCR	1 cut(s)	95
EagI	CGGCCG	1 cut(s)	95
Eam1104I	CTCTTC	1 cut(s)	713
EarI	CTCTTC	1 cut(s)	713
Ecl136II	GAGCTC	1 cut(s)	436
EclXI	CGGCCG	1 cut(s)	95
Eco130I	CCWWGG	2 cut(s)	965, 1022
Eco147I	AGGCCT	1 cut(s)	1067
Eco24I	GRGCYC	2 cut(s)	438, 642
Eco47I	GGWCC	2 cut(s)	253, 731
Eco52I	CGGCCG	1 cut(s)	95
Eco53kI	GAGCTC	1 cut(s)	436
Eco57I	CTGAAG	1 cut(s)	410
Eco88I	CYCGRG	2 cut(s)	707, 734
Eco91I	GGTNACC	1 cut(s)	170
EcoICRI	GAGCTC	1 cut(s)	436
EcoO65I	GGTNACC	1 cut(s)	170
EcoRII	CCWGG	6 cut(s)	45, 57, 423, 512, 658, 866
EcoT14I	CCWWGG	2 cut(s)	965, 1022
EcoT38I	GRGCYC	2 cut(s)	438, 642
EgeI	GGCGCC	1 cut(s)	135
EheI	GGCGCC	1 cut(s)	135
ErhI	CCWWGG	2 cut(s)	965, 1022
FaeI	CATG	3 cut(s)	548, 703, 969
FalI	AAGNNNNNCTT	2 cut(s)	1052, 1084
FatI	CATG	3 cut(s)	544, 699, 965
FauI	CCCGC	2 cut(s)	215, 624
FbaI	TGATCA	1 cut(s)	1081
Fnu4HI	GCNGC	5 cut(s)	92, 95, 220, 498, 501
FokI	GGATG	3 cut(s)	357, 550, 948
FriOI	GRGCYC	2 cut(s)	438, 642
Fsp4HI	GCNGC	5 cut(s)	92, 95, 220, 498, 501
FspBI	CTAG	1 cut(s)	1113
GlaI	GCGC	3 cut(s)	135, 338, 754
GluI	GCNGC	5 cut(s)	92, 95, 220, 498, 501
GsaI	CCCAGC	1 cut(s)	218
HaeII	RGCGCY	2 cut(s)	137, 756
HaeIII	GGCC	9 cut(s)	83, 97, 207, 219, 278, 803, 871, 1021, 1067
HgaI	GACGC	2 cut(s)	10, 125
HhaI	GCGC	3 cut(s)	136, 339, 755
Hin1I	GRCGYC	2 cut(s)	33, 134
Hin1II	CATG	3 cut(s)	548, 703, 969
Hin6I	GCGC	3 cut(s)	134, 337, 753
HinP1I	GCGC	3 cut(s)	134, 337, 753
HinfI	GANTC	6 cut(s)	160, 178, 688, 763, 1093, 1133
HphI	GGTGA	6 cut(s)	164, 229, 413, 439, 544, 856
Hpy166II	GTNNAC	4 cut(s)	421, 491, 672, 812
Hpy188I	TCNGA	7 cut(s)	26, 112, 143, 183, 375, 876, 883
Hpy188III	TCNNGA	5 cut(s)	40, 307, 835, 856, 1137
Hpy8I	GTNNAC	4 cut(s)	421, 491, 672, 812
HpyAV	CCTTC	4 cut(s)	73, 385, 437, 1057
HpyCH4III	ACNGT	2 cut(s)	488, 520
HpyCH4IV	ACGT	6 cut(s)	15, 33, 156, 330, 417, 507
HpyCH4V	TGCA	6 cut(s)	12, 282, 562, 830, 980, 1121
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 447, 509, 616, 986, 1118
HpyF3I	CTNAG	3 cut(s)	525, 873, 1097
HpySE526I	ACGT	6 cut(s)	15, 33, 156, 330, 417, 507
Hsp92I	GRCGYC	2 cut(s)	33, 134
Hsp92II	CATG	3 cut(s)	548, 703, 969
HspAI	GCGC	3 cut(s)	134, 337, 753
KasI	GGCGCC	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	306
KroI	GCCGGC	1 cut(s)	130
KroNI	GCCGGC	1 cut(s)	132
Ksp22I	TGATCA	1 cut(s)	1081
KspI	CCGCGG	1 cut(s)	223
Kzo9I	GATC	5 cut(s)	120, 138, 183, 922, 1081
LmnI	GCTCC	7 cut(s)	88, 211, 309, 367, 433, 750, 994
Lsp1109I	GCAGC	1 cut(s)	484
LweI	GCATC	3 cut(s)	243, 379, 900
MabI	ACCWGGT	1 cut(s)	423
MaeI	CTAG	1 cut(s)	1113
MaeII	ACGT	6 cut(s)	15, 33, 156, 330, 417, 507
MaeIII	GTNAC	2 cut(s)	170, 969
MalI	GATC	5 cut(s)	122, 140, 185, 924, 1083
MbiI	CCGCTC	2 cut(s)	91, 166
MboI	GATC	5 cut(s)	120, 138, 183, 922, 1081
MboII	GAAGA	3 cut(s)	85, 88, 730
MflI	RGATCY	1 cut(s)	922
MhlI	GDGCHC	6 cut(s)	53, 150, 438, 483, 612, 642
MluCI	AATT	3 cut(s)	358, 724, 1077
Mly113I	GGCGCC	1 cut(s)	134
MlyI	GAGTC	3 cut(s)	172, 697, 1087
MreI	CGCCGGCG	1 cut(s)	130
MroI	TCCGGA	1 cut(s)	306
MroNI	GCCGGC	1 cut(s)	130
MroXI	GAANNNNTTC	1 cut(s)	104
MseI	TTAA	2 cut(s)	621, 1056
MslI	CAYNNNNRTG	2 cut(s)	486, 549
MspA1I	CMGCKG	1 cut(s)	222
MspCI	CTTAAG	1 cut(s)	620
MspR9I	CCNGG	9 cut(s)	47, 59, 85, 209, 425, 514, 660, 868, 920
MvaI	CCWGG	6 cut(s)	47, 59, 425, 514, 660, 868
MvnI	CGCG	4 cut(s)	119, 222, 258, 339
MwoI	GCNNNNNNNGC	6 cut(s)	18, 447, 509, 616, 986, 1118
NaeI	GCCGGC	1 cut(s)	132
NarI	GGCGCC	1 cut(s)	134
NciI	CCSGG	3 cut(s)	85, 209, 920
NcoI	CCATGG	1 cut(s)	965
NdeII	GATC	5 cut(s)	120, 138, 183, 922, 1081
NgoMIV	GCCGGC	1 cut(s)	130
NlaIII	CATG	3 cut(s)	548, 703, 969
NlaIV	GGNNCC	7 cut(s)	52, 135, 705, 733, 789, 864, 924
NmeAIII	GCCGAG	1 cut(s)	829
NmuCI	GTSAC	1 cut(s)	170
NspV	TTCGAA	1 cut(s)	596
OliI	CACNNNNGTG	1 cut(s)	486
PceI	AGGCCT	1 cut(s)	1067
PcsI	WCGNNNNNNNCGW	2 cut(s)	134, 336
PdiI	GCCGGC	1 cut(s)	132
PdmI	GAANNNNTTC	1 cut(s)	104
PfeI	GAWTC	3 cut(s)	160, 763, 1133
PkrI	GCNGC	5 cut(s)	93, 96, 221, 499, 502
PleI	GAGTC	3 cut(s)	172, 696, 1087
PluTI	GGCGCC	1 cut(s)	137
PpsI	GAGTC	3 cut(s)	172, 696, 1087
Psp124BI	GAGCTC	1 cut(s)	438
Psp1406I	AACGTT	1 cut(s)	417
Psp6I	CCWGG	6 cut(s)	45, 57, 423, 512, 658, 866
PspEI	GGTNACC	1 cut(s)	170
PspFI	CCCAGC	1 cut(s)	214
PspGI	CCWGG	6 cut(s)	45, 57, 423, 512, 658, 866
PspN4I	GGNNCC	7 cut(s)	52, 135, 705, 733, 789, 864, 924
PspPI	GGNCC	5 cut(s)	205, 217, 253, 731, 801
PsuI	RGATCY	1 cut(s)	922
RsaI	GTAC	3 cut(s)	197, 250, 695
RsaNI	GTAC	3 cut(s)	196, 249, 694
RseI	CAYNNNNRTG	2 cut(s)	486, 549
Rsr2I	CGGWCCG	1 cut(s)	253
RsrII	CGGWCCG	1 cut(s)	253
SacI	GAGCTC	1 cut(s)	438
SacII	CCGCGG	1 cut(s)	223
SaqAI	TTAA	2 cut(s)	621, 1056
SatI	GCNGC	5 cut(s)	92, 95, 220, 498, 501
Sau3AI	GATC	5 cut(s)	120, 138, 183, 922, 1081
Sau96I	GGNCC	5 cut(s)	205, 217, 253, 731, 801
SchI	GAGTC	3 cut(s)	172, 697, 1087
ScrFI	CCNGG	9 cut(s)	47, 59, 85, 209, 425, 514, 660, 868, 920
SduI	GDGCHC	6 cut(s)	53, 150, 438, 483, 612, 642
SexAI	ACCWGGT	1 cut(s)	423
SfaNI	GCATC	3 cut(s)	243, 379, 900
SfcI	CTRYAG	1 cut(s)	484
SfoI	GGCGCC	1 cut(s)	135
Sfr303I	CCGCGG	1 cut(s)	223
SfuI	TTCGAA	1 cut(s)	596
SgrAI	CRCCGGYG	1 cut(s)	130
SgrBI	CCGCGG	1 cut(s)	223
SinI	GGWCC	2 cut(s)	253, 731
SmiMI	CAYNNNNRTG	2 cut(s)	486, 549
SmlI	CTYRAG	4 cut(s)	149, 620, 835, 1028
SmoI	CTYRAG	4 cut(s)	149, 620, 835, 1028
Sse9I	AATT	3 cut(s)	358, 724, 1077
SseBI	AGGCCT	1 cut(s)	1067
SsiI	CCGC	8 cut(s)	91, 94, 164, 220, 222, 256, 500, 617
SspDI	GGCGCC	1 cut(s)	133
SspMI	CTAG	1 cut(s)	1113
SstI	GAGCTC	1 cut(s)	438
StuI	AGGCCT	1 cut(s)	1067
StyD4I	CCNGG	9 cut(s)	45, 57, 83, 207, 423, 512, 658, 866, 918
StyI	CCWWGG	2 cut(s)	965, 1022
TaaI	ACNGT	2 cut(s)	488, 520
TaiI	ACGT	6 cut(s)	18, 36, 159, 333, 420, 510
TaqI	TCGA	4 cut(s)	39, 459, 596, 915
TaqII	GACCGA	1 cut(s)	158
TasI	AATT	3 cut(s)	358, 724, 1077
TatI	WGTACW	1 cut(s)	195
TauI	GCSGC	4 cut(s)	94, 97, 222, 503
TfiI	GAWTC	3 cut(s)	160, 763, 1133
Tru1I	TTAA	2 cut(s)	621, 1056
Tru9I	TTAA	2 cut(s)	621, 1056
TscAI	CASTG	2 cut(s)	493, 1128
TseFI	GTSAC	1 cut(s)	170
TseI	GCWGC	1 cut(s)	497
Tsp45I	GTSAC	1 cut(s)	170
TspDTI	ATGAA	1 cut(s)	1061
TspGWI	ACGGA	4 cut(s)	266, 313, 681, 689
TspRI	CASTG	2 cut(s)	493, 1128
Vha464I	CTTAAG	1 cut(s)	620
VpaK11BI	GGWCC	2 cut(s)	253, 731
XmnI	GAANNNNTTC	1 cut(s)	104
XspI	CTAG	1 cut(s)	1113
ZraI	GACGTC	1 cut(s)	34

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.