Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002286

Physical Location & Seq

Genomic Coordinates Forward (+)

56771725 .. 56774341

Gene Structure 2617 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0432800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGAGGACCAAGAAGCGGAATTCATCGGAATCTGATAGAGGTTGGTTAAGTTGCGATATGTCAGAATCAACTTTTGGCTGGCCCCTTCAGAAAGTAACTGTTCCTATGGAGACTCAGGGAGCTTGTGAAAAATCAGATGATGATTCGAAGAGTTGGGAGGTTGAAGAAGATGAATATGCATCACCTTTATCAAGGCCTGGTTGGCCTCTCCTTCGTGTAGCAACCTCCGAAACCATGAGTACTCCTGGTAGAAAGTTTGAAGCAAAAGATGTGTCTGTAGTCGAGTGGGTGATGGGACTTCCTAGTCGAACAACATCAGTCAATCTGCAGCTTGCTAATGAATTGAAGTTCCTCATTAAGAAAGACTCAGAAGGTTGCAGGATGTTTGGCTACGCCGAAATAAGGACTGCAACTTCTCAATTCTCCTCAGATAATCTTATCGGCGAGGGAGGGTGCAGCAGTGTGTACAGAGGAGTTCTCCGATGTGGGAAATCCGTGGCGGTGAAGATTTTGAAAGTATACAAGGAAGCTGGGGATGATTTTTGCTTGGAAGCCAAATTTGTGTCTTCAATTAAGCATAAGCATATAGTATCTCTCATTGGCGTGTGTGTGGAAGATGAGAATCTTGTTCTAGTATATGAGCTCTTTCCTAGGGGGAGTTTGGAGGAGAACTTGCATGATTGTAATGATGGTTCTGTACTGCCATGGGAAGTGAGATTCAACGTGGCAGTTGCAGTTGCTGAGGCTCTAAATTATCTACACAATGAGTGCCCTCAGCCGATTATTCATAGAGACGTAAAATCTGCAAACATTCTTCTCTCAAGTGATCATCAGCCACAGTTATCAGATTTTGGGCTTGCTATATGGGGATCAGTGGATTCTAGTTATGTAATAAGTAATGATGTGGTGGGAACTTTCGGATACATGGCTCCAGAGTATTTCATGCAAGGGAGGGTCAGTGACAAGGTTGATGTGTACGCCTTTGGTGTAGTTCTCCTTGAACTACTATCAGGAAGAAAGCCAGTTGATGTTGAGGCTCCAAAAGGACAAGAGAGCTTGATCAAGTGGGCAAGAAAGCTATTAAAAATTGGAGATCTTAAAGCATTGCTGGATCCCAAGCTAAGAGCGGACTATGATATTGTCCAAATTCGTAGAATGTCTATGGCAGCAAGTCTTTGCACAAAGTCAGCTCAAATTCGTCCAAATATGAGGCAGGTACTGAAAATCTTAGGAGGGGAGACAGATGCCAATGAGTCAGACTATTATGAAGCCGAAGATGACAGTTTACTGGAAGCTGATTGGAATTCAGTTTCCGAAGTGTCCGAGACAAAGGATGATAGCATTTCACCATCAAGTTCTACTGATACAGCATCCAGTGCAGGAAAAACTCCCCGCCTTAAGTTGAAGGACTACTTAACTATACATGATCATCAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

479

Amino Acids

53.26

Weight (kDa)

5.08

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	143 - 408	1.9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	144 - 343	4.4e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47950 AT3G47950 AT5G62670
fragaria_vesca	FvH4_5g15700 FvH4_5g15700 FvH4_5g15700 FvH4_5g15700 FvH4_6g49360
malus_domestica	MD06G1186400.v1.1 MD14G1192600.v1.1 MD17G1046600.v1.1
prunus_persica	Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.5G185000_v2.0.a1
pyrus_communis	pycom06g16560 pycom06g16570 pycom14g16020 pycom17g04150
rosa_chinensis	RchiOBHm_Chr2g0169231 RchiOBHm_Chr7g0180411
rosa_laevigata	RLG00000005268 RLG00000021844
rosa_multiflora	Rmu_co8446409.1_g000001 Rmu_sc0003526.1_g000005 Rmu_ssc0000440.1_g000009
rosa_roxburghii	Rroxscaffold_2G00082330 Rroxscaffold_3G00272910
rosa_rugosa	Rorug02G0538400 Rorug06G0432800 Rorug06G0432900 Rorug06G0432900
rosa_samantha	Rh2AG609900 Rh2BG622800 Rh2CG591300 Rh7AG033500 Rh7BG033500 Rh7CG035400 Rh7DG033900
rosa_wichuraiana	Rw2G050570 Rw7G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	303
Acc36I	ACCTGC	1 cut(s)	1204
AccBSI	CCGCTC	1 cut(s)	1127
AccI	GTMKAC	1 cut(s)	519
AciI	CCGC	4 cut(s)	16, 500, 1127, 1393
AclWI	GGATC	3 cut(s)	877, 1106, 1119
AcsI	RAATTY	5 cut(s)	19, 557, 1146, 1194, 1303
AcuI	CTGAAG	1 cut(s)	71
AfaI	GTAC	5 cut(s)	241, 467, 699, 977, 1218
AfiI	CCNNNNNNNGG	2 cut(s)	15, 402
AflII	CTTAAG	1 cut(s)	1397
AgsI	TTSAA	8 cut(s)	164, 260, 346, 514, 570, 721, 1001, 1405
AjnI	CCWGG	2 cut(s)	196, 244
AjuI	GAANNNNNNNTTGG	2 cut(s)	57, 89
AluBI	AGCT	9 cut(s)	122, 331, 530, 643, 1056, 1078, 1120, 1190, 1295
AluI	AGCT	9 cut(s)	122, 331, 530, 643, 1056, 1078, 1120, 1190, 1295
Alw21I	GWGCWC	1 cut(s)	645
Alw26I	GTCTC	4 cut(s)	104, 786, 1232, 1319
AlwI	GGATC	3 cut(s)	877, 1106, 1119
AlwNI	CAGNNNCTG	2 cut(s)	740, 1219
AoxI	GGCC	3 cut(s)	80, 194, 203
ApeKI	GCWGC	3 cut(s)	328, 456, 1166
ApoI	RAATTY	5 cut(s)	19, 557, 1146, 1194, 1303
ArsI	GACNNNNNNTTYG	2 cut(s)	257, 289
AspA2I	CCTAGG	1 cut(s)	650
AspS9I	GGNCC	2 cut(s)	6, 81
AsuHPI	GGTGA	4 cut(s)	174, 301, 514, 1338
AsuII	TTCGAA	1 cut(s)	146
AvaII	GGWCC	1 cut(s)	6
AvrII	CCTAGG	1 cut(s)	650
BaeGI	GKGCMC	1 cut(s)	773
BamHI	GGATCC	1 cut(s)	1111
BanII	GRGCYC	1 cut(s)	645
BbsI	GAAGAC	1 cut(s)	558
Bbv12I	GWGCWC	1 cut(s)	645
BbvCI	CCTCAGC	2 cut(s)	741, 774
BbvI	GCAGC	3 cut(s)	340, 468, 1178
BccI	CCATC	3 cut(s)	286, 683, 1357
BciT130I	CCWGG	2 cut(s)	198, 246
BciVI	GTATCC	1 cut(s)	914
BclI	TGATCA	3 cut(s)	826, 1059, 1426
BcoDI	GTCTC	4 cut(s)	104, 786, 1232, 1319
BfaI	CTAG	4 cut(s)	303, 632, 651, 882
BfmI	CTRYAG	2 cut(s)	276, 326
BfrI	CTTAAG	1 cut(s)	1397
BfuAI	ACCTGC	1 cut(s)	1204
BfuI	GTATCC	1 cut(s)	914
BglI	GCCNNNNNGGC	1 cut(s)	202
BglII	AGATCT	1 cut(s)	1093
BisI	GCNGC	3 cut(s)	329, 457, 1167
BlnI	CCTAGG	1 cut(s)	650
BlsI	GCNGC	3 cut(s)	330, 458, 1168
BmcAI	AGTACT	1 cut(s)	241
Bme1390I	CCNGG	2 cut(s)	198, 246
Bme18I	GGWCC	1 cut(s)	6
BmgT120I	GGNCC	2 cut(s)	6, 81
BmiI	GGNNCC	4 cut(s)	83, 930, 1038, 1113
BmrFI	CCNGG	2 cut(s)	198, 246
BmsI	GCATC	3 cut(s)	188, 1234, 1379
BpiI	GAAGAC	1 cut(s)	558
BplI	GAGNNNNNCTC	2 cut(s)	462, 494
BpmI	CTGGAG	1 cut(s)	915
Bpu10I	CCTNAGC	2 cut(s)	741, 774
Bpu14I	TTCGAA	1 cut(s)	146
BpuEI	CTTGAG	1 cut(s)	805
BsaBI	GATNNNNATC	1 cut(s)	621
BsaJI	CCNNGG	3 cut(s)	495, 650, 704
BsaXI	ACNNNNNCTCC	2 cut(s)	943, 973
Bsc4I	CCNNNNNNNGG	2 cut(s)	15, 402
Bse1I	ACTGG	3 cut(s)	1022, 1293, 1374
Bse3DI	GCAATG	1 cut(s)	1103
Bse8I	GATNNNNATC	1 cut(s)	621
BseBI	CCWGG	2 cut(s)	198, 246
BseDI	CCNNGG	3 cut(s)	495, 650, 704
BseGI	GGATG	4 cut(s)	387, 541, 1339, 1370
BseJI	GATNNNNATC	1 cut(s)	621
BseLI	CCNNNNNNNGG	2 cut(s)	15, 402
BseMI	GCAATG	1 cut(s)	1103
BseMII	CTCAG	5 cut(s)	128, 381, 441, 732, 788
BseNI	ACTGG	3 cut(s)	1022, 1293, 1374
BseRI	GAGGAG	3 cut(s)	415, 486, 680
BseSI	GKGCMC	1 cut(s)	773
BseXI	GCAGC	3 cut(s)	340, 468, 1178
BseYI	CCCAGC	1 cut(s)	530
BsgI	GTGCAG	2 cut(s)	475, 1398
BshFI	GGCC	3 cut(s)	82, 196, 205
BsiHKAI	GWGCWC	1 cut(s)	645
BslFI	GGGAC	1 cut(s)	309
BslI	CCNNNNNNNGG	2 cut(s)	15, 402
BsmAI	GTCTC	4 cut(s)	104, 786, 1232, 1319
BsmBI	CGTCTC	1 cut(s)	786
BsmFI	GGGAC	1 cut(s)	309
BsnI	GGCC	3 cut(s)	82, 196, 205
Bsp119I	TTCGAA	1 cut(s)	146
Bsp1286I	GDGCHC	2 cut(s)	645, 773
Bsp1407I	TGTACA	1 cut(s)	465
Bsp143I	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
Bsp19I	CCATGG	1 cut(s)	704
BspACI	CCGC	4 cut(s)	16, 500, 1127, 1393
BspANI	GGCC	3 cut(s)	82, 196, 205
BspCNI	CTCAG	5 cut(s)	127, 380, 440, 733, 787
BspLI	GGNNCC	4 cut(s)	83, 930, 1038, 1113
BspMAI	CTGCAG	1 cut(s)	330
BspMI	ACCTGC	1 cut(s)	1204
BspPI	GGATC	3 cut(s)	877, 1106, 1119
BspT104I	TTCGAA	1 cut(s)	146
BspTI	CTTAAG	1 cut(s)	1397
BsrBI	CCGCTC	1 cut(s)	1127
BsrDI	GCAATG	1 cut(s)	1103
BsrGI	TGTACA	1 cut(s)	465
BsrI	ACTGG	3 cut(s)	1022, 1293, 1374
BssECI	CCNNGG	3 cut(s)	495, 650, 704
BssMI	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
BssNAI	GTATAC	1 cut(s)	520
BssT1I	CCWWGG	2 cut(s)	650, 704
Bst1107I	GTATAC	1 cut(s)	520
Bst2UI	CCWGG	2 cut(s)	198, 246
Bst4CI	ACNGT	3 cut(s)	100, 840, 1283
Bst6I	CTCTTC	1 cut(s)	143
BstAFI	CTTAAG	1 cut(s)	1397
BstAPI	GCANNNNNTGC	1 cut(s)	1376
BstAUI	TGTACA	1 cut(s)	465
BstBI	TTCGAA	1 cut(s)	146
BstC8I	GCNNGC	3 cut(s)	80, 333, 858
BstDEI	CTNAG	7 cut(s)	114, 367, 427, 741, 774, 1121, 1228
BstDSI	CCRYGG	2 cut(s)	495, 704
BstF5I	GGATG	4 cut(s)	387, 541, 1339, 1370
BstKTI	GATC	6 cut(s)	829, 872, 1062, 1096, 1114, 1429
BstMAI	GTCTC	4 cut(s)	104, 786, 1232, 1319
BstMBI	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
BstMWI	GCNNNNNNNGC	2 cut(s)	202, 1376
BstNI	CCWGG	2 cut(s)	198, 246
BstSCI	CCNGG	2 cut(s)	196, 244
BstSFI	CTRYAG	2 cut(s)	276, 326
BstSLI	GKGCMC	1 cut(s)	773
BstV1I	GCAGC	3 cut(s)	340, 468, 1178
BstV2I	GAAGAC	1 cut(s)	558
BstX2I	RGATCY	2 cut(s)	1093, 1111
BstYI	RGATCY	2 cut(s)	1093, 1111
BstZ17I	GTATAC	1 cut(s)	520
BsuI	GTATCC	1 cut(s)	914
BsuRI	GGCC	3 cut(s)	82, 196, 205
BtgI	CCRYGG	2 cut(s)	495, 704
BtsCI	GGATG	4 cut(s)	387, 541, 1339, 1370
BtsI	GCAGTG	1 cut(s)	466
BtsIMutI	CAGTG	4 cut(s)	466, 879, 964, 1381
BveI	ACCTGC	1 cut(s)	1204
Cac8I	GCNNGC	3 cut(s)	80, 333, 858
CaiI	CAGNNNCTG	2 cut(s)	740, 1219
Cfr13I	GGNCC	2 cut(s)	6, 81
Csp6I	GTAC	5 cut(s)	240, 466, 698, 976, 1217
CviAII	CATG	6 cut(s)	235, 677, 705, 925, 943, 1424
CviQI	GTAC	5 cut(s)	240, 466, 698, 976, 1217
DdeI	CTNAG	7 cut(s)	114, 367, 427, 741, 774, 1121, 1228
DpnI	GATC	6 cut(s)	828, 871, 1061, 1095, 1113, 1428
DpnII	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
DrdI	GACNNNNNNGTC	1 cut(s)	303
DseDI	GACNNNNNNGTC	1 cut(s)	303
Eam1104I	CTCTTC	1 cut(s)	143
EarI	CTCTTC	1 cut(s)	143
Ecl136II	GAGCTC	1 cut(s)	643
Eco130I	CCWWGG	2 cut(s)	650, 704
Eco147I	AGGCCT	1 cut(s)	196
Eco24I	GRGCYC	1 cut(s)	645
Eco47I	GGWCC	1 cut(s)	6
Eco53kI	GAGCTC	1 cut(s)	643
Eco57I	CTGAAG	1 cut(s)	71
EcoICRI	GAGCTC	1 cut(s)	643
EcoRI	GAATTC	2 cut(s)	19, 1303
EcoRII	CCWGG	2 cut(s)	196, 244
EcoT14I	CCWWGG	2 cut(s)	650, 704
EcoT22I	ATGCAT	1 cut(s)	181
EcoT38I	GRGCYC	1 cut(s)	645
ErhI	CCWWGG	2 cut(s)	650, 704
Esp3I	CGTCTC	1 cut(s)	786
FaeI	CATG	6 cut(s)	238, 680, 708, 928, 946, 1427
FalI	AAGNNNNNCTT	2 cut(s)	1397, 1429
FaqI	GGGAC	1 cut(s)	309
FatI	CATG	6 cut(s)	234, 676, 704, 924, 942, 1423
FauI	CCCGC	1 cut(s)	1400
FbaI	TGATCA	3 cut(s)	826, 1059, 1426
FblI	GTMKAC	1 cut(s)	519
Fnu4HI	GCNGC	3 cut(s)	329, 457, 1167
FokI	GGATG	4 cut(s)	394, 548, 1346, 1357
FriOI	GRGCYC	1 cut(s)	645
Fsp4HI	GCNGC	3 cut(s)	329, 457, 1167
FspBI	CTAG	4 cut(s)	303, 632, 651, 882
GluI	GCNGC	3 cut(s)	329, 457, 1167
GsaI	CCCAGC	1 cut(s)	534
GsuI	CTGGAG	1 cut(s)	915
HaeIII	GGCC	3 cut(s)	82, 196, 205
Hin1II	CATG	6 cut(s)	238, 680, 708, 928, 946, 1427
HinfI	GANTC	9 cut(s)	29, 65, 112, 143, 365, 622, 717, 878, 1253
HphI	GGTGA	4 cut(s)	174, 301, 514, 1338
Hpy166II	GTNNAC	4 cut(s)	466, 520, 976, 1286
Hpy188III	TCNNGA	2 cut(s)	932, 1011
Hpy8I	GTNNAC	4 cut(s)	466, 520, 976, 1286
HpyAV	CCTTC	4 cut(s)	95, 221, 365, 1399
HpyCH4III	ACNGT	3 cut(s)	100, 840, 1283
HpyCH4IV	ACGT	2 cut(s)	723, 795
HpyF10VI	GCNNNNNNNGC	2 cut(s)	202, 1376
HpyF3I	CTNAG	7 cut(s)	114, 367, 427, 741, 774, 1121, 1228
HpySE526I	ACGT	2 cut(s)	723, 795
Hsp92II	CATG	6 cut(s)	238, 680, 708, 928, 946, 1427
Ksp22I	TGATCA	3 cut(s)	826, 1059, 1426
Kzo9I	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
LmnI	GCTCC	3 cut(s)	119, 934, 1042
Lsp1109I	GCAGC	3 cut(s)	340, 468, 1178
LweI	GCATC	3 cut(s)	188, 1234, 1379
MaeI	CTAG	4 cut(s)	303, 632, 651, 882
MaeII	ACGT	2 cut(s)	723, 795
MaeIII	GTNAC	2 cut(s)	94, 959
MalI	GATC	6 cut(s)	828, 871, 1061, 1095, 1113, 1428
MbiI	CCGCTC	1 cut(s)	1127
MboI	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
MboII	GAAGA	9 cut(s)	160, 176, 179, 517, 558, 626, 806, 1026, 1286
MflI	RGATCY	2 cut(s)	1093, 1111
MhlI	GDGCHC	2 cut(s)	645, 773
MlyI	GAGTC	3 cut(s)	106, 359, 1262
Mph1103I	ATGCAT	1 cut(s)	181
MseI	TTAA	7 cut(s)	47, 357, 573, 1082, 1098, 1398, 1415
MslI	CAYNNNNRTG	1 cut(s)	602
MspCI	CTTAAG	1 cut(s)	1397
MspR9I	CCNGG	2 cut(s)	198, 246
MvaI	CCWGG	2 cut(s)	198, 246
MwoI	GCNNNNNNNGC	2 cut(s)	202, 1376
NcoI	CCATGG	1 cut(s)	704
NdeII	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
NlaIII	CATG	6 cut(s)	238, 680, 708, 928, 946, 1427
NlaIV	GGNNCC	4 cut(s)	83, 930, 1038, 1113
NmuCI	GTSAC	1 cut(s)	959
NsiI	ATGCAT	1 cut(s)	181
NspV	TTCGAA	1 cut(s)	146
PceI	AGGCCT	1 cut(s)	196
PfeI	GAWTC	6 cut(s)	29, 65, 143, 622, 717, 878
PkrI	GCNGC	3 cut(s)	330, 458, 1168
PleI	GAGTC	3 cut(s)	106, 359, 1261
PpsI	GAGTC	3 cut(s)	106, 359, 1261
Psp124BI	GAGCTC	1 cut(s)	645
Psp6I	CCWGG	2 cut(s)	196, 244
PspFI	CCCAGC	1 cut(s)	530
PspGI	CCWGG	2 cut(s)	196, 244
PspN4I	GGNNCC	4 cut(s)	83, 930, 1038, 1113
PspPI	GGNCC	2 cut(s)	6, 81
PsrI	GAACNNNNNNTAC	2 cut(s)	676, 708
PstI	CTGCAG	1 cut(s)	330
PstNI	CAGNNNCTG	2 cut(s)	740, 1219
PsuI	RGATCY	2 cut(s)	1093, 1111
RsaI	GTAC	5 cut(s)	241, 467, 699, 977, 1218
RsaNI	GTAC	5 cut(s)	240, 466, 698, 976, 1217
RseI	CAYNNNNRTG	1 cut(s)	602
SacI	GAGCTC	1 cut(s)	645
SaqAI	TTAA	7 cut(s)	47, 357, 573, 1082, 1098, 1398, 1415
SatI	GCNGC	3 cut(s)	329, 457, 1167
Sau3AI	GATC	6 cut(s)	826, 869, 1059, 1093, 1111, 1426
Sau96I	GGNCC	2 cut(s)	6, 81
ScaI	AGTACT	1 cut(s)	241
SchI	GAGTC	3 cut(s)	106, 359, 1262
ScrFI	CCNGG	2 cut(s)	198, 246
SduI	GDGCHC	2 cut(s)	645, 773
SfaNI	GCATC	3 cut(s)	188, 1234, 1379
SfcI	CTRYAG	2 cut(s)	276, 326
SfiI	GGCCNNNNNGGCC	1 cut(s)	202
SfuI	TTCGAA	1 cut(s)	146
SinI	GGWCC	1 cut(s)	6
SmiMI	CAYNNNNRTG	1 cut(s)	602
SmlI	CTYRAG	2 cut(s)	820, 1397
SmoI	CTYRAG	2 cut(s)	820, 1397
SseBI	AGGCCT	1 cut(s)	196
SsiI	CCGC	4 cut(s)	16, 500, 1127, 1393
SspMI	CTAG	4 cut(s)	303, 632, 651, 882
SstI	GAGCTC	1 cut(s)	645
StuI	AGGCCT	1 cut(s)	196
StyD4I	CCNGG	2 cut(s)	196, 244
StyI	CCWWGG	2 cut(s)	650, 704
TaaI	ACNGT	3 cut(s)	100, 840, 1283
TaiI	ACGT	2 cut(s)	726, 798
TaqI	TCGA	3 cut(s)	146, 282, 307
TatI	WGTACW	3 cut(s)	239, 465, 697
TfiI	GAWTC	6 cut(s)	29, 65, 143, 622, 717, 878
Tru1I	TTAA	7 cut(s)	47, 357, 573, 1082, 1098, 1398, 1415
Tru9I	TTAA	7 cut(s)	47, 357, 573, 1082, 1098, 1398, 1415
TscAI	CASTG	4 cut(s)	466, 879, 964, 1381
TseFI	GTSAC	1 cut(s)	959
TseI	GCWGC	3 cut(s)	328, 456, 1166
Tsp45I	GTSAC	1 cut(s)	959
TspDTI	ATGAA	6 cut(s)	12, 186, 354, 776, 931, 1281
TspGWI	ACGGA	1 cut(s)	484
TspRI	CASTG	4 cut(s)	466, 879, 964, 1381
Vha464I	CTTAAG	1 cut(s)	1397
VpaK11BI	GGWCC	1 cut(s)	6
XapI	RAATTY	5 cut(s)	19, 557, 1146, 1194, 1303
XmaJI	CCTAGG	1 cut(s)	650
XmiI	GTMKAC	1 cut(s)	519
XspI	CTAG	4 cut(s)	303, 632, 651, 882
ZrmI	AGTACT	1 cut(s)	241
Zsp2I	ATGCAT	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.