FvH4_5g15700

ATPase 11, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0002286
Physical Location & Seq
Reverse (-)
8864738 .. 8870980
6243 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15700.t4

Sequence Viewer

Length: 2760 bp
ATGGCGGAGGAGAAGCCTGAAGTGCTGGACGCCGTGCTGAAGGAGACGGTTGATTTGGAAAACATACCCATTGAGGAGGTGTTTGAGAATCTGAGATGTAGCAAAGAGGGTCTCACCAGTGAGGCTGCTGAGGAAAGATTAACCATTTTTGGGCACAACAAGCTTGAGGAAAAGCAGGAGAGCAAATTTATCAAGTTTCTGGGCTTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCTGCTGCTATAATGGCCATTGCTCTTGCAAATGGAGGAGGCAAGCCTCCGGACTGGCAAGATTTTGTGGGTATCATTACTCTGCTGGTTATCAACTCCACCATTAGTTTCATTGAGGAAAATAATGCGGGTAATGCTGCAGCGGCTCTCATGGCTCGTCTTGCGCCTAAAGCCAAGGTGCTTCGAGATGGAAGGTGGAACGAGCAAGATGCCGCTGTCCTAGTACCTGGAGACATAATTAGCATCAAACTTGGCGATATCGTTCCAGCTGATGCACGGCTGCTTGAAGGGGATCCCTTAAAAATTGATCAGTCTGCCCTTACAGGCGAGTCTCTTCCCGTGACAAAAGGCCCTGGAGATGGTGTGTACTCTGGTTCAACTTGCAAACAAGGAGAGATTGAAGCAGTGGTCATTGCTACAGGTGTGCATACATTCTTTGGGAAGGCTGCTCATCTCGTTGATAGCACTAACCAAGTGGGCCACTTCCAAAAGGTCTTAACTGCAATAGGGAATTTCTGCATATGCTCTATCGCTGTGGTTCTGTCTGTGACTATGGCAATTGGCTCTCATAGATTAGCACAGCAGGGAGCTATCACAAAGAGAATGACAGCAATTGAAGAGATGGCGGGCATGGATGTGCTTTGTAGTGATAAAACAGGAACCCTAACACTGAACAAGCTTACAGTTGATAAGAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCGGATACTGTTGTTCTGATGGCAGCTCGAGCATCGAGGACAGAGAATCAAGATGCAATAGATACTGCTATAGTTGGGATGCTGGCTGATCCTAAGGAGGCACGTGCTGGCATTCAAGAAATACACTTCCTTCCTTTCAATCCTACTGATAAGCGTACTGCTTTGACTTATATTGACCGTGATGGTAAAATGCATAGAGTTAGCAAGGGTGCACCAGAGCAGATTCTACATCTCGCCCACAATAAGTCAGACATTGAGCGCAGAGTTCATGCAGTGATTGATAAGTTTGCTGAGCGAGGATTACGGTCCCTTGCTGTAGCATACCAGGAAGTTCCAGAAGGAATCAAAGAGGGTGCTGGAGGCCCATGGCAGTTCATTGGTCTAATGCCACTCTTTGACCCACCTAGGCACGATAGTGCAGAGACAATACGGAGGGCTTTAAATCTTGGAGTAAATGTGAAAATGATTACAGGTGATCAACTGGCCATAGGAAAGGAAACGGGTCGTCGTTTGGGAATGGGAACCAATATGTATCCTTCATCAGCTTTACTAGGACAGAACAAGGATGAGTCAATTGCGGCTTTACCCATTGATGATCTGATAGAAAAAGCCGATGGCTTTGCTGGTGTATTCCCAGAGCACAAATACGAGATTGTAAAACGCTTGCAAGCAATGAAACATATCTGTGGAATGACTGGTGATGGTGTAAATGATGCTCCTGCCCTCAAGAAAGCCGATATTGGTATTGCTGTTGCTGATGCAACAGATGCAGCACGTAGTGCTTCTGATATTGTGCTAACTGAACCTGGACTCAGTGTAATCATTAGTGCCGTTTTGACCAGTCGAGCAATCTTCCAGAGGATGAAAAATTACACAATATATGCTGTTTCCATCACAATTCGTATTGTGATGGGTTTCATGTTGCTGGCCCTCATATGGAAGTTCGACTTTCCACCTTTCATGGTGCTTATTATTGCAATCCTCAATGATGGTACTATCATGACGATATCAAAGGATAGGGTCAAACCATCTCCTCTGCCAGATAGCTGGAAGCTGGCCGAGATTTTTGCTACTGGAATTGTGCTCGGTTCCTACTTGGCAATAATGACTGTGATATTCTTTTGGGCAGCATACAAAACAGACTTCTTCCCAAGGACATTTGGGGTGTCAACTCTTGAGAAAACAGCTAATGATGACTTCCGGAAACTTGCCTCTGCTATATATCTACAAGTTAGCATCATTAGCCAGGCCCTCATTTTTGTCACACGCTCTCGAGGTTGGTCCTTTCTTGAGCGGCCTGGAATGTTACTTTTTGTGGCTTTCCTGATAGCCCAGCTGATTGCCACCTTGATAGCAGTGTATGCTAACTGGAGTTTTGCTGCAATCGAAGGGATTGGATGGGGTTGGGCTGGGGTGATCTGGCTCTATAATATCGTATTCTATATCCCACTGGATATCATAAAGTTCATGATACGCTATGCTCTCAGTGGGAAGGCTTGGGATCTTCTCATTGAGCAAAGGATTGCTTTTACAAGGCAAAAGGACTTTGGCAAGGAACAACGTGAGCTTCAATGGGCACATGCACAAAGAACATTGCATGGTTTGCAACCACCAGATACCAAGATGTTTACTGAAAGAACACATTTCACTGAACTCAATCATATGGCTGAAGAAGCCAAAAGAAGAGCTGAAATCGCAAGGTTGAGAGAACTGCATACACTGAAAGGTCACGTAGAGTCAGTGGTGCGATTGAAGGGTCTCGACATCGACACAATTCAGCAAGCTTACACAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

920

Amino Acids

101.17

Weight (kDa)

6.08

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 21 - 84 3.8e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 133 - 232 1.3e-30 P-type ATPase actuator domain
Hydrolase PF00702 328 - 605 2.2e-12 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 375 - 496 7.6e-06 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 2257
AccIII TCCGGA 3 cut(s) 286, 964, 2163
AciI CCGC 7 cut(s) 5, 365, 380, 450, 863, 1541, 2257
AclWI GGATC 6 cut(s) 524, 537, 956, 969, 1046, 2472
AcoI YGGCCR 3 cut(s) 252, 1446, 2019
AcsI RAATTY 2 cut(s) 185, 748
AcuI CTGAAG 3 cut(s) 39, 59, 2652
AcvI CACGTG 1 cut(s) 1067
AcyI GRCGYC 1 cut(s) 30
AdeI CACNNNGTG 1 cut(s) 1742
AfaI GTAC 4 cut(s) 462, 605, 1120, 1957
AfiI CCNNNNNNNGG 3 cut(s) 150, 596, 1899
AgsI TTSAA 8 cut(s) 524, 615, 638, 854, 1079, 1102, 2534, 2716
AjnI CCWGG 6 cut(s) 463, 589, 1287, 1768, 2208, 2260
AleI CACNNNNGTG 1 cut(s) 1377
Alw21I GWGCWC 3 cut(s) 1177, 1605, 2049
Alw26I GTCTC 6 cut(s) 38, 116, 462, 573, 1379, 2726
Alw44I GTGCAC 1 cut(s) 1173
AlwI GGATC 6 cut(s) 524, 537, 956, 969, 1046, 2472
Ama87I CYCGRG 2 cut(s) 990, 2235
Aor13HI TCCGGA 3 cut(s) 286, 964, 2163
AoxI GGCC 9 cut(s) 252, 586, 715, 1324, 1446, 1890, 2019, 2211, 2258
ApaLI GTGCAC 1 cut(s) 1173
ApoI RAATTY 2 cut(s) 185, 748
ArsI GACNNNNNNTTYG 2 cut(s) 37, 69
AspA2I CCTAGG 1 cut(s) 1367
AspLEI GCGC 2 cut(s) 403, 1224
AspS9I GGNCC 7 cut(s) 587, 715, 1269, 1325, 1891, 2212, 2244
AsuHPI GGTGA 4 cut(s) 106, 1448, 1673, 2389
AvaI CYCGRG 2 cut(s) 990, 2235
AvaII GGWCC 2 cut(s) 1269, 2244
AvrII CCTAGG 1 cut(s) 1367
AxyI CCTNAGG 1 cut(s) 1056
BaeGI GKGCMC 3 cut(s) 156, 1177, 2542
BaeI ACNNNNGTAYC 2 cut(s) 960, 993
BalI TGGCCA 2 cut(s) 254, 1448
BamHI GGATCC 2 cut(s) 529, 961
BbrPI CACGTG 1 cut(s) 1067
Bbv12I GWGCWC 3 cut(s) 1177, 1605, 2049
BbvCI CCTCAGC 1 cut(s) 129
BceAI ACGGC 3 cut(s) 17, 530, 1778
BcgI CGANNNNNNTGC 6 cut(s) 428, 462, 1565, 1599, 2012, 2046
BciT130I CCWGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
BciVI GTATCC 2 cut(s) 961, 1506
BclI TGATCA 2 cut(s) 544, 1438
BcoDI GTCTC 6 cut(s) 38, 116, 462, 573, 1379, 2726
BfaI CTAG 4 cut(s) 458, 1368, 1514, 2758
BfmI CTRYAG 4 cut(s) 375, 654, 1032, 1278
BfuI GTATCC 2 cut(s) 961, 1506
BlnI CCTAGG 1 cut(s) 1367
BlpI GCTNAGC 1 cut(s) 1254
Bme1390I CCNGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
Bme18I GGWCC 2 cut(s) 1269, 2244
BmeT110I CYCGRG 2 cut(s) 990, 2235
BmgT120I GGNCC 7 cut(s) 587, 715, 1269, 1325, 1891, 2212, 2244
BmiI GGNNCC 6 cut(s) 531, 898, 963, 1271, 1486, 2053
BmrFI CCNGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
BpmI CTGGAG 4 cut(s) 486, 612, 1341, 2353
Bpu10I CCTNAGC 1 cut(s) 129
Bpu1102I GCTNAGC 1 cut(s) 1254
BpuEI CTTGAG 4 cut(s) 185, 1673, 2159, 2273
BsaAI YACGTR 3 cut(s) 1067, 1739, 2695
BsaBI GATNNNNATC 1 cut(s) 930
BsaHI GRCGYC 1 cut(s) 30
BsaI GGTCTC 2 cut(s) 116, 2726
BsaJI CCNNGG 5 cut(s) 411, 589, 1328, 1367, 2114
BsaWI WCCGGW 3 cut(s) 286, 964, 2163
BsaXI ACNNNNNCTCC 4 cut(s) 585, 615, 1404, 1434
Bsc4I CCNNNNNNNGG 3 cut(s) 150, 596, 1899
Bse1I ACTGG 8 cut(s) 117, 296, 1449, 1663, 1803, 2041, 2336, 2418
Bse21I CCTNAGG 1 cut(s) 1056
Bse3DI GCAATG 4 cut(s) 255, 648, 1641, 2555
Bse8I GATNNNNATC 1 cut(s) 930
BseAI TCCGGA 3 cut(s) 286, 964, 2163
BseBI CCWGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
BseDI CCNNGG 5 cut(s) 411, 589, 1328, 1367, 2114
BseGI GGATG 5 cut(s) 877, 1047, 1534, 1830, 2366
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 3 cut(s) 150, 596, 1899
BseMI GCAATG 4 cut(s) 255, 648, 1641, 2555
BseMII CTCAG 5 cut(s) 83, 120, 1245, 1789, 2461
BseNI ACTGG 8 cut(s) 117, 296, 1449, 1663, 1803, 2041, 2336, 2418
BseRI GAGGAG 4 cut(s) 23, 89, 288, 1986
BseSI GKGCMC 3 cut(s) 156, 1177, 2542
BseYI CCCAGC 2 cut(s) 2295, 2372
BsgI GTGCAG 1 cut(s) 1401
BshFI GGCC 9 cut(s) 254, 588, 717, 1326, 1448, 1892, 2021, 2213, 2260
BsiHKAI GWGCWC 3 cut(s) 1177, 1605, 2049
BsiHKCI CYCGRG 2 cut(s) 990, 2235
BsiSI CCGG 3 cut(s) 287, 965, 2164
BslFI GGGAC 1 cut(s) 1255
BslI CCNNNNNNNGG 3 cut(s) 150, 596, 1899
BsmAI GTCTC 6 cut(s) 38, 116, 462, 573, 1379, 2726
BsmBI CGTCTC 1 cut(s) 38
BsmFI GGGAC 1 cut(s) 1255
BsmI GAATGC 1 cut(s) 1074
BsnI GGCC 9 cut(s) 254, 588, 717, 1326, 1448, 1892, 2021, 2213, 2260
Bso31I GGTCTC 2 cut(s) 116, 2726
BsoBI CYCGRG 2 cut(s) 990, 2235
Bsp1286I GDGCHC 5 cut(s) 156, 1177, 1605, 2049, 2542
Bsp13I TCCGGA 3 cut(s) 286, 964, 2163
Bsp143I GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
Bsp1720I GCTNAGC 1 cut(s) 1254
Bsp19I CCATGG 1 cut(s) 1328
BspACI CCGC 7 cut(s) 5, 365, 380, 450, 863, 1541, 2257
BspANI GGCC 9 cut(s) 254, 588, 717, 1326, 1448, 1892, 2021, 2213, 2260
BspCNI CTCAG 5 cut(s) 84, 121, 1246, 1788, 2460
BspEI TCCGGA 3 cut(s) 286, 964, 2163
BspHI TCATGA 2 cut(s) 1962, 2430
BspLI GGNNCC 6 cut(s) 531, 898, 963, 1271, 1486, 2053
BspMAI CTGCAG 1 cut(s) 379
BspPI GGATC 6 cut(s) 524, 537, 956, 969, 1046, 2472
BspQI GCTCTTC 1 cut(s) 2641
BspTNI GGTCTC 2 cut(s) 116, 2726
BsrBI CCGCTC 1 cut(s) 2257
BsrDI GCAATG 4 cut(s) 255, 648, 1641, 2555
BsrI ACTGG 8 cut(s) 117, 296, 1449, 1663, 1803, 2041, 2336, 2418
BssECI CCNNGG 5 cut(s) 411, 589, 1328, 1367, 2114
BssMI GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
BssNI GRCGYC 1 cut(s) 30
BssT1I CCWWGG 4 cut(s) 411, 1328, 1367, 2114
Bst2UI CCWGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
Bst4CI ACNGT 7 cut(s) 49, 922, 973, 1142, 1269, 2074, 2755
Bst6I CTCTTC 3 cut(s) 576, 849, 2641
BstACI GRCGYC 1 cut(s) 30
BstAPI GCANNNNNTGC 4 cut(s) 1730, 1742, 2324, 2566
BstBAI YACGTR 3 cut(s) 1067, 1739, 2695
BstC8I GCNNGC 9 cut(s) 281, 865, 1047, 1072, 1628, 1632, 1890, 2019, 2745
BstDEI CTNAG 6 cut(s) 92, 129, 1056, 1254, 1775, 2447
BstDSI CCRYGG 1 cut(s) 1328
BstF5I GGATG 5 cut(s) 877, 1047, 1534, 1830, 2366
BstHHI GCGC 2 cut(s) 403, 1224
BstKTI GATC 8 cut(s) 532, 547, 964, 1054, 1441, 1561, 2382, 2467
BstMAI GTCTC 6 cut(s) 38, 116, 462, 573, 1379, 2726
BstMBI GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
BstNI CCWGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
BstNSI RCATGY 1 cut(s) 2546
BstSCI CCNGG 6 cut(s) 463, 589, 1287, 1768, 2208, 2260
BstSFI CTRYAG 4 cut(s) 375, 654, 1032, 1278
BstSLI GKGCMC 3 cut(s) 156, 1177, 2542
BstX2I RGATCY 3 cut(s) 529, 961, 2464
BstXI CCANNNNNNTGG 1 cut(s) 2010
BstYI RGATCY 3 cut(s) 529, 961, 2464
Bsu36I CCTNAGG 1 cut(s) 1056
BsuI GTATCC 2 cut(s) 961, 1506
BsuRI GGCC 9 cut(s) 254, 588, 717, 1326, 1448, 1892, 2021, 2213, 2260
BtgI CCRYGG 1 cut(s) 1328
BtsCI GGATG 5 cut(s) 877, 1047, 1534, 1830, 2366
BtsI GCAGTG 3 cut(s) 648, 1242, 2325
Cac8I GCNNGC 9 cut(s) 281, 865, 1047, 1072, 1628, 1632, 1890, 2019, 2745
CciI TCATGA 2 cut(s) 1962, 2430
CfoI GCGC 2 cut(s) 403, 1224
Cfr13I GGNCC 7 cut(s) 587, 715, 1269, 1325, 1891, 2212, 2244
CseI GACGC 1 cut(s) 38
Csp6I GTAC 4 cut(s) 461, 604, 1119, 1956
CspCI CAANNNNNGTGG 2 cut(s) 939, 974
CviQI GTAC 4 cut(s) 461, 604, 1119, 1956
DdeI CTNAG 6 cut(s) 92, 129, 1056, 1254, 1775, 2447
DpnI GATC 8 cut(s) 531, 546, 963, 1053, 1440, 1560, 2381, 2466
DpnII GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
DraI TTTAAA 1 cut(s) 1404
DraIII CACNNNGTG 1 cut(s) 1742
EaeI YGGCCR 3 cut(s) 252, 1446, 2019
Eam1104I CTCTTC 3 cut(s) 576, 849, 2641
EarI CTCTTC 3 cut(s) 576, 849, 2641
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 4 cut(s) 411, 1328, 1367, 2114
Eco31I GGTCTC 2 cut(s) 116, 2726
Eco32I GATATC 3 cut(s) 496, 1971, 2419
Eco47I GGWCC 2 cut(s) 1269, 2244
Eco57I CTGAAG 3 cut(s) 39, 59, 2652
Eco72I CACGTG 1 cut(s) 1067
Eco81I CCTNAGG 1 cut(s) 1056
Eco88I CYCGRG 2 cut(s) 990, 2235
EcoO109I RGGNCCY 2 cut(s) 587, 2212
EcoRII CCWGG 6 cut(s) 463, 589, 1287, 1768, 2208, 2260
EcoRV GATATC 3 cut(s) 496, 1971, 2419
EcoT14I CCWWGG 4 cut(s) 411, 1328, 1367, 2114
EcoT22I ATGCAT 1 cut(s) 1158
ErhI CCWWGG 4 cut(s) 411, 1328, 1367, 2114
Esp3I CGTCTC 1 cut(s) 38
FalI AAGNNNNNCTT 4 cut(s) 1895, 1927, 2473, 2505
FaqI GGGAC 1 cut(s) 1255
FauI CCCGC 2 cut(s) 358, 856
FauNDI CATATG 3 cut(s) 758, 1898, 2625
FbaI TGATCA 2 cut(s) 544, 1438
FokI GGATG 5 cut(s) 884, 1054, 1541, 1837, 2373
FspBI CTAG 4 cut(s) 458, 1368, 1514, 2758
GlaI GCGC 2 cut(s) 402, 1223
GsaI CCCAGC 2 cut(s) 2299, 2376
GsuI CTGGAG 4 cut(s) 486, 612, 1341, 2353
HaeIII GGCC 9 cut(s) 254, 588, 717, 1326, 1448, 1892, 2021, 2213, 2260
HapII CCGG 3 cut(s) 287, 965, 2164
HgaI GACGC 1 cut(s) 38
HhaI GCGC 2 cut(s) 403, 1224
Hin1I GRCGYC 1 cut(s) 30
Hin6I GCGC 2 cut(s) 401, 1222
HinP1I GCGC 2 cut(s) 401, 1222
HincII GTYRAC 1 cut(s) 2133
HindII GTYRAC 1 cut(s) 2133
HindIII AAGCTT 3 cut(s) 161, 914, 2745
HpaII CCGG 3 cut(s) 287, 965, 2164
HphI GGTGA 4 cut(s) 106, 1448, 1673, 2389
Hpy166II GTNNAC 4 cut(s) 604, 1175, 2133, 2592
Hpy188I TCNGA 5 cut(s) 93, 981, 1213, 1563, 1750
Hpy8I GTNNAC 4 cut(s) 604, 1175, 2133, 2592
Hpy99I CGWCG 1 cut(s) 1473
HpyCH4III ACNGT 7 cut(s) 49, 922, 973, 1142, 1269, 2074, 2755
HpyCH4IV ACGT 4 cut(s) 1066, 1738, 2524, 2694
HpyF3I CTNAG 6 cut(s) 92, 129, 1056, 1254, 1775, 2447
HpySE526I ACGT 4 cut(s) 1066, 1738, 2524, 2694
Hsp92I GRCGYC 1 cut(s) 30
HspAI GCGC 2 cut(s) 401, 1222
Kpn2I TCCGGA 3 cut(s) 286, 964, 2163
Ksp22I TGATCA 2 cut(s) 544, 1438
Kzo9I GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
LguI GCTCTTC 1 cut(s) 2641
LmnI GCTCC 2 cut(s) 824, 1684
MaeI CTAG 4 cut(s) 458, 1368, 1514, 2758
MaeII ACGT 4 cut(s) 1066, 1738, 2524, 2694
MaeIII GTNAC 5 cut(s) 577, 784, 2224, 2268, 2690
MalI GATC 8 cut(s) 531, 546, 963, 1053, 1440, 1560, 2381, 2466
MbiI CCGCTC 1 cut(s) 2257
MboI GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
MboII GAAGA 7 cut(s) 563, 866, 1807, 2101, 2459, 2645, 2658
MfeI CAATTG 3 cut(s) 795, 849, 1536
MflI RGATCY 3 cut(s) 529, 961, 2464
MhlI GDGCHC 5 cut(s) 156, 1177, 1605, 2049, 2542
MlsI TGGCCA 2 cut(s) 254, 1448
MluNI TGGCCA 2 cut(s) 254, 1448
MlyI GAGTC 4 cut(s) 575, 1541, 1767, 2708
Mox20I TGGCCA 2 cut(s) 254, 1448
Mph1103I ATGCAT 1 cut(s) 1158
MroI TCCGGA 3 cut(s) 286, 964, 2163
MscI TGGCCA 2 cut(s) 254, 1448
MseI TTAA 4 cut(s) 140, 536, 734, 1403
MslI CAYNNNNRTG 3 cut(s) 872, 1377, 1647
Msp20I TGGCCA 2 cut(s) 254, 1448
MspA1I CMGCKG 4 cut(s) 380, 452, 506, 2299
MspI CCGG 3 cut(s) 287, 965, 2164
MspR9I CCNGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
MunI CAATTG 3 cut(s) 795, 849, 1536
Mva1269I GAATGC 1 cut(s) 1074
MvaI CCWGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
NcoI CCATGG 1 cut(s) 1328
NdeI CATATG 3 cut(s) 758, 1898, 2625
NdeII GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
NlaIV GGNNCC 6 cut(s) 531, 898, 963, 1271, 1486, 2053
NmeAIII GCCGAG 1 cut(s) 2047
NmuCI GTSAC 4 cut(s) 577, 784, 2224, 2690
NsiI ATGCAT 1 cut(s) 1158
NspI RCATGY 1 cut(s) 2546
OliI CACNNNNGTG 1 cut(s) 1377
PaeR7I CTCGAG 2 cut(s) 990, 2235
PagI TCATGA 2 cut(s) 1962, 2430
PciSI GCTCTTC 1 cut(s) 2641
PctI GAATGC 1 cut(s) 1074
PfeI GAWTC 6 cut(s) 88, 214, 931, 1009, 1186, 1305
PleI GAGTC 4 cut(s) 574, 1540, 1767, 2707
PmaCI CACGTG 1 cut(s) 1067
PmlI CACGTG 1 cut(s) 1067
PpsI GAGTC 4 cut(s) 574, 1540, 1767, 2707
Ppu21I YACGTR 3 cut(s) 1067, 1739, 2695
Psp6I CCWGG 6 cut(s) 463, 589, 1287, 1768, 2208, 2260
PspCI CACGTG 1 cut(s) 1067
PspFI CCCAGC 2 cut(s) 2295, 2372
PspGI CCWGG 6 cut(s) 463, 589, 1287, 1768, 2208, 2260
PspN4I GGNNCC 6 cut(s) 531, 898, 963, 1271, 1486, 2053
PspPI GGNCC 7 cut(s) 587, 715, 1269, 1325, 1891, 2212, 2244
PspXI VCTCGAGB 1 cut(s) 990
PstI CTGCAG 1 cut(s) 379
PsuI RGATCY 3 cut(s) 529, 961, 2464
PvuII CAGCTG 2 cut(s) 506, 2299
RsaI GTAC 4 cut(s) 462, 605, 1120, 1957
RsaNI GTAC 4 cut(s) 461, 604, 1119, 1956
RseI CAYNNNNRTG 3 cut(s) 872, 1377, 1647
SapI GCTCTTC 1 cut(s) 2641
SaqAI TTAA 4 cut(s) 140, 536, 734, 1403
Sau3AI GATC 8 cut(s) 529, 544, 961, 1051, 1438, 1558, 2379, 2464
Sau96I GGNCC 7 cut(s) 587, 715, 1269, 1325, 1891, 2212, 2244
SchI GAGTC 4 cut(s) 575, 1541, 1767, 2708
ScrFI CCNGG 6 cut(s) 465, 591, 1289, 1770, 2210, 2262
SduI GDGCHC 5 cut(s) 156, 1177, 1605, 2049, 2542
SfcI CTRYAG 4 cut(s) 375, 654, 1032, 1278
Sfr274I CTCGAG 2 cut(s) 990, 2235
SinI GGWCC 2 cut(s) 1269, 2244
SlaI CTCGAG 2 cut(s) 990, 2235
SmiMI CAYNNNNRTG 3 cut(s) 872, 1377, 1647
SmlI CTYRAG 6 cut(s) 164, 990, 1688, 2138, 2235, 2252
SmoI CTYRAG 6 cut(s) 164, 990, 1688, 2138, 2235, 2252
SsiI CCGC 7 cut(s) 5, 365, 380, 450, 863, 1541, 2257
SspMI CTAG 4 cut(s) 458, 1368, 1514, 2758
StyD4I CCNGG 6 cut(s) 463, 589, 1287, 1768, 2208, 2260
StyI CCWWGG 4 cut(s) 411, 1328, 1367, 2114
TaaI ACNGT 7 cut(s) 49, 922, 973, 1142, 1269, 2074, 2755
TaiI ACGT 4 cut(s) 1069, 1741, 2527, 2697
TaqI TCGA 9 cut(s) 421, 991, 998, 1807, 1908, 2236, 2349, 2724, 2730
TatI WGTACW 1 cut(s) 603
TauI GCSGC 4 cut(s) 383, 452, 1544, 2260
TfiI GAWTC 6 cut(s) 88, 214, 931, 1009, 1186, 1305
Tru1I TTAA 4 cut(s) 140, 536, 734, 1403
Tru9I TTAA 4 cut(s) 140, 536, 734, 1403
TseFI GTSAC 4 cut(s) 577, 784, 2224, 2690
Tsp45I GTSAC 4 cut(s) 577, 784, 2224, 2690
TspDTI ATGAA 9 cut(s) 337, 1220, 1327, 1491, 1652, 1841, 1870, 1912, 2419
TspGWI ACGGA 1 cut(s) 1408
VneI GTGCAC 1 cut(s) 1173
VpaK11BI GGWCC 2 cut(s) 1269, 2244
XapI RAATTY 2 cut(s) 185, 748
XceI RCATGY 1 cut(s) 2546
XhoI CTCGAG 2 cut(s) 990, 2235
XmaJI CCTAGG 1 cut(s) 1367
XspI CTAG 4 cut(s) 458, 1368, 1514, 2758
Zsp2I ATGCAT 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.