pycom06g16560

ATPase 11, plasma

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
20805514 .. 20807979
2466 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g16560.9

Sequence Viewer

Length: 1377 bp
ATGGGGGAGAAGCCTGAAGTATTGGATGCTGTGTTGAAGGAAACTGTGGATTTGGAAAATATACCCATTGAAGAGGTGTTTGAGAATCTGAGATGTAGCAAAGAGGGTCTCAGCAGTGAGGCTGCTGAGGAAAGACTCACCATTTTTGGGCACAACAAGCTTGAAGAAAAGCAGGAGAGCAAATTTTTGAAGTTTTTGGGGTTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCTGCTGCTATAATGGCCATTGCTCTTGCAAATGGAGGGGGTAAGCCACCGGATTGGCAAGATTTTGTGGGTATTATTACTCTGCTTGTCATCAATTCAACCATCAGTTTCATTGAGGAAAACAATGCTGGTAATGCTGCAGCAGCACTCATGGCTCGTCTAGCTCCAAAAGCTAAGGTCCTTCGAGATGGAAGGTGGAACGAGCAAGATGCTGCTGTTCTTGTACCTGGTGACATAATCAGTATTAAGCTAGGTGATATTGTTCCAGCTGATGCTCGTCTACTTGACGGGGATCCTTTGAAAATTGACCAGTCTGCACTTACAGGTGAATCCCTTCCCGTGACGAAAAGCCCTGGGGATGGTGTGTATTCTGGTTCTACTTGCAAACAAGGAGAGATTGATGCAGTGGTCATTGCCACTGGTGTCCATACCTTCTTTGGGAAAGCTGCTCACCTTGTTGATAGCACGAATCAAGTGGGCCACTTCCAAAAGGTCTTGACTGCAATTGGGAATTTCTGCATATGTTCGATTGCTGTGGGGATGGTAATAGAGATAATTGTCATGTACCCGATACAAGACCGACAATACCGTCCTGGAATTGATAACCTTCTTGTGCTTCTCATTGGTGGAATTCCAATTGCAATGCCCACTGTTTTGTCTGTGACAATGGCTATTGGGTCTCATAGATTAGCACAGCAGGGAGCTATTACAAAGAGAATGACAGCAATTGAAGAGATGGCGGGCATGGATGTCCTTTGCAGTGACAAGACCGGAACTCTGACATTGAATAAGCTTACTGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCGGATACTGTTGTGTTGATGGCAGCTCGAGCCTCCAGACTGGAGAATCAAGATGCAATAGATACTGCTATAGTTGGGATGCTTGCTGATCCAAAGGAGGCACGTGCTGGCATTCAAGAAATACACTTCCTTCCTTTCAATCCTACTGATAAACGAACTGCATTAACTTATCTTGACCGTGATGGTAAAATGCATAGAGTTAGCAAAGGTGCACCAGAGCAGATTTTAAATCTTGCACACAATAAGTCAGACATCGAGCGCAGAGTTCATGCTGTTATTGATAAGTTTGCTGAGCGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

459

Amino Acids

49.58

Weight (kDa)

5.22

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 822
AccI GTMKAC 1 cut(s) 514
AccIII TCCGGA 1 cut(s) 1075
AciI CCGC 1 cut(s) 974
AclWI GGATC 5 cut(s) 521, 534, 1067, 1080, 1157
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 3 cut(s) 182, 745, 864
AcuI CTGAAG 1 cut(s) 36
AcvI CACGTG 1 cut(s) 1178
AfaI GTAC 2 cut(s) 459, 800
AfiI CCNNNNNNNGG 3 cut(s) 147, 593, 672
AjnI CCWGG 3 cut(s) 460, 586, 826
Alw21I GWGCWC 1 cut(s) 1288
Alw26I GTCTC 2 cut(s) 113, 918
Alw44I GTGCAC 1 cut(s) 1284
AlwI GGATC 5 cut(s) 521, 534, 1067, 1080, 1157
Ama87I CYCGRG 1 cut(s) 1101
Aor13HI TCCGGA 1 cut(s) 1075
AoxI GGCC 2 cut(s) 249, 712
ApaLI GTGCAC 1 cut(s) 1284
ApeKI GCWGC 9 cut(s) 122, 236, 239, 371, 374, 377, 446, 680, 1097
ApoI RAATTY 3 cut(s) 182, 745, 864
Asp700I GAANNNNTTC 1 cut(s) 567
AspLEI GCGC 1 cut(s) 1335
AspS9I GGNCC 2 cut(s) 412, 712
AsuHPI GGTGA 5 cut(s) 130, 476, 500, 572, 677
AvaI CYCGRG 1 cut(s) 1101
AvaII GGWCC 1 cut(s) 412
BaeGI GKGCMC 2 cut(s) 153, 1288
BaeI ACNNNNGTAYC 2 cut(s) 1071, 1104
BalI TGGCCA 1 cut(s) 251
BamHI GGATCC 2 cut(s) 526, 1072
BbrPI CACGTG 1 cut(s) 1178
Bbv12I GWGCWC 1 cut(s) 1288
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 9 cut(s) 109, 223, 226, 358, 386, 389, 433, 667, 1109
BccI CCATC 7 cut(s) 344, 416, 587, 769, 964, 1087, 1250
BcgI CGANNNNNNTGC 2 cut(s) 425, 459
BciT130I CCWGG 3 cut(s) 462, 588, 828
BciVI GTATCC 1 cut(s) 1072
BcoDI GTCTC 2 cut(s) 113, 918
BfaI CTAG 2 cut(s) 395, 485
BfmI CTRYAG 2 cut(s) 372, 1143
BfuI GTATCC 1 cut(s) 1072
BisI GCNGC 9 cut(s) 123, 237, 240, 372, 375, 378, 447, 681, 1098
BlpI GCTNAGC 1 cut(s) 1365
BlsI GCNGC 9 cut(s) 124, 238, 241, 373, 376, 379, 448, 682, 1099
Bme1390I CCNGG 3 cut(s) 462, 588, 828
Bme18I GGWCC 1 cut(s) 412
BmeT110I CYCGRG 1 cut(s) 1101
BmgT120I GGNCC 2 cut(s) 412, 712
BmiI GGNNCC 2 cut(s) 528, 1074
BmrFI CCNGG 3 cut(s) 462, 588, 828
BmsI GCATC 6 cut(s) 16, 433, 496, 625, 1117, 1143
BpmI CTGGAG 2 cut(s) 1093, 1136
Bpu10I CCTNAGC 2 cut(s) 126, 408
Bpu1102I GCTNAGC 1 cut(s) 1365
BsaAI YACGTR 1 cut(s) 1178
BsaI GGTCTC 2 cut(s) 113, 918
BsaJI CCNNGG 2 cut(s) 586, 587
BsaWI WCCGGW 3 cut(s) 283, 1004, 1075
Bsc4I CCNNNNNNNGG 3 cut(s) 147, 593, 672
Bse1I ACTGG 3 cut(s) 544, 658, 1119
Bse3DI GCAATG 3 cut(s) 252, 645, 882
BseAI TCCGGA 1 cut(s) 1075
BseBI CCWGG 3 cut(s) 462, 588, 828
BseDI CCNNGG 2 cut(s) 586, 587
BseGI GGATG 5 cut(s) 31, 598, 780, 988, 1158
BseLI CCNNNNNNNGG 3 cut(s) 147, 593, 672
BseMI GCAATG 3 cut(s) 252, 645, 882
BseMII CTCAG 4 cut(s) 80, 117, 124, 1356
BseNI ACTGG 3 cut(s) 544, 658, 1119
BseSI GKGCMC 2 cut(s) 153, 1288
BseXI GCAGC 9 cut(s) 109, 223, 226, 358, 386, 389, 433, 667, 1109
BsgI GTGCAG 1 cut(s) 534
BshFI GGCC 2 cut(s) 251, 714
BsiHKAI GWGCWC 1 cut(s) 1288
BsiHKCI CYCGRG 1 cut(s) 1101
BsiSI CCGG 3 cut(s) 284, 1005, 1076
BslI CCNNNNNNNGG 3 cut(s) 147, 593, 672
BsmAI GTCTC 2 cut(s) 113, 918
BsmI GAATGC 1 cut(s) 1185
BsnI GGCC 2 cut(s) 251, 714
Bso31I GGTCTC 2 cut(s) 113, 918
BsoBI CYCGRG 1 cut(s) 1101
Bsp1286I GDGCHC 2 cut(s) 153, 1288
Bsp13I TCCGGA 1 cut(s) 1075
Bsp143I GATC 3 cut(s) 526, 1072, 1162
Bsp1720I GCTNAGC 1 cut(s) 1365
BspACI CCGC 1 cut(s) 974
BspANI GGCC 2 cut(s) 251, 714
BspCNI CTCAG 4 cut(s) 81, 118, 123, 1357
BspEI TCCGGA 1 cut(s) 1075
BspLI GGNNCC 2 cut(s) 528, 1074
BspMAI CTGCAG 1 cut(s) 376
BspPI GGATC 5 cut(s) 521, 534, 1067, 1080, 1157
BspTNI GGTCTC 2 cut(s) 113, 918
BsrDI GCAATG 3 cut(s) 252, 645, 882
BsrI ACTGG 3 cut(s) 544, 658, 1119
BssECI CCNNGG 2 cut(s) 586, 587
BssMI GATC 3 cut(s) 526, 1072, 1162
Bst2UI CCWGG 3 cut(s) 462, 588, 828
Bst4CI ACNGT 6 cut(s) 46, 824, 886, 1033, 1084, 1253
Bst6I CTCTTC 2 cut(s) 66, 960
BstBAI YACGTR 1 cut(s) 1178
BstC8I GCNNGC 3 cut(s) 976, 1158, 1183
BstDEI CTNAG 5 cut(s) 89, 110, 126, 408, 1365
BstF5I GGATG 5 cut(s) 31, 598, 780, 988, 1158
BstHHI GCGC 1 cut(s) 1335
BstKTI GATC 3 cut(s) 529, 1075, 1165
BstMAI GTCTC 2 cut(s) 113, 918
BstMBI GATC 3 cut(s) 526, 1072, 1162
BstMWI GCNNNNNNNGC 8 cut(s) 157, 248, 368, 377, 386, 395, 404, 1103
BstNI CCWGG 3 cut(s) 462, 588, 828
BstSCI CCNGG 3 cut(s) 460, 586, 826
BstSFI CTRYAG 2 cut(s) 372, 1143
BstSLI GKGCMC 2 cut(s) 153, 1288
BstV1I GCAGC 9 cut(s) 109, 223, 226, 358, 386, 389, 433, 667, 1109
BstX2I RGATCY 2 cut(s) 526, 1072
BstXI CCANNNNNNTGG 1 cut(s) 288
BstYI RGATCY 2 cut(s) 526, 1072
BsuI GTATCC 1 cut(s) 1072
BsuRI GGCC 2 cut(s) 251, 714
BtsCI GGATG 5 cut(s) 31, 598, 780, 988, 1158
BtsI GCAGTG 3 cut(s) 121, 645, 1000
BtsIMutI CAGTG 5 cut(s) 121, 645, 651, 882, 1000
Cac8I GCNNGC 3 cut(s) 976, 1158, 1183
CfoI GCGC 1 cut(s) 1335
Cfr13I GGNCC 2 cut(s) 412, 712
CsiI ACCWGGT 1 cut(s) 460
Csp6I GTAC 2 cut(s) 458, 799
CspCI CAANNNNNGTGG 2 cut(s) 1050, 1085
CviAII CATG 5 cut(s) 222, 385, 796, 979, 1343
CviQI GTAC 2 cut(s) 458, 799
DdeI CTNAG 5 cut(s) 89, 110, 126, 408, 1365
DpnI GATC 3 cut(s) 528, 1074, 1164
DpnII GATC 3 cut(s) 526, 1072, 1162
DraI TTTAAA 1 cut(s) 1302
DrdI GACNNNNNNGTC 1 cut(s) 822
DseDI GACNNNNNNGTC 1 cut(s) 822
EaeI YGGCCR 1 cut(s) 249
Eam1104I CTCTTC 2 cut(s) 66, 960
EarI CTCTTC 2 cut(s) 66, 960
Eco31I GGTCTC 2 cut(s) 113, 918
Eco47I GGWCC 1 cut(s) 412
Eco57I CTGAAG 1 cut(s) 36
Eco72I CACGTG 1 cut(s) 1178
Eco88I CYCGRG 1 cut(s) 1101
EcoO109I RGGNCCY 1 cut(s) 412
EcoRI GAATTC 1 cut(s) 864
EcoRII CCWGG 3 cut(s) 460, 586, 826
EcoT22I ATGCAT 1 cut(s) 1269
FaeI CATG 5 cut(s) 225, 388, 799, 982, 1346
FatI CATG 5 cut(s) 221, 384, 795, 978, 1342
FauI CCCGC 1 cut(s) 967
FauNDI CATATG 1 cut(s) 755
FblI GTMKAC 1 cut(s) 514
Fnu4HI GCNGC 9 cut(s) 123, 237, 240, 372, 375, 378, 447, 681, 1098
FokI GGATG 5 cut(s) 38, 605, 787, 995, 1165
Fsp4HI GCNGC 9 cut(s) 123, 237, 240, 372, 375, 378, 447, 681, 1098
FspBI CTAG 2 cut(s) 395, 485
GlaI GCGC 1 cut(s) 1334
GluI GCNGC 9 cut(s) 123, 237, 240, 372, 375, 378, 447, 681, 1098
GsuI CTGGAG 2 cut(s) 1093, 1136
HaeIII GGCC 2 cut(s) 251, 714
HapII CCGG 3 cut(s) 284, 1005, 1076
HhaI GCGC 1 cut(s) 1335
Hin1II CATG 5 cut(s) 225, 388, 799, 982, 1346
Hin6I GCGC 1 cut(s) 1333
HinP1I GCGC 1 cut(s) 1333
HincII GTYRAC 1 cut(s) 1036
HindII GTYRAC 1 cut(s) 1036
HindIII AAGCTT 2 cut(s) 158, 1025
HinfI GANTC 6 cut(s) 85, 135, 211, 563, 703, 1120
HpaII CCGG 3 cut(s) 284, 1005, 1076
HphI GGTGA 5 cut(s) 130, 476, 500, 572, 677
Hpy166II GTNNAC 3 cut(s) 515, 1036, 1286
Hpy188I TCNGA 3 cut(s) 90, 1014, 1324
Hpy188III TCNNGA 7 cut(s) 419, 730, 1076, 1110, 1124, 1190, 1247
Hpy8I GTNNAC 3 cut(s) 515, 1036, 1286
HpyAV CCTTC 7 cut(s) 31, 420, 425, 578, 676, 851, 1214
HpyCH4III ACNGT 6 cut(s) 46, 824, 886, 1033, 1084, 1253
HpyCH4IV ACGT 1 cut(s) 1177
HpyF10VI GCNNNNNNNGC 8 cut(s) 157, 248, 368, 377, 386, 395, 404, 1103
HpyF3I CTNAG 5 cut(s) 89, 110, 126, 408, 1365
HpySE526I ACGT 1 cut(s) 1177
Hsp92II CATG 5 cut(s) 225, 388, 799, 982, 1346
HspAI GCGC 1 cut(s) 1333
Kpn2I TCCGGA 1 cut(s) 1075
Kzo9I GATC 3 cut(s) 526, 1072, 1162
LmnI GCTCC 2 cut(s) 403, 935
Lsp1109I GCAGC 9 cut(s) 109, 223, 226, 358, 386, 389, 433, 667, 1109
LweI GCATC 6 cut(s) 16, 433, 496, 625, 1117, 1143
MabI ACCWGGT 1 cut(s) 460
MaeI CTAG 2 cut(s) 395, 485
MaeII ACGT 1 cut(s) 1177
MaeIII GTNAC 4 cut(s) 464, 574, 895, 995
MalI GATC 3 cut(s) 528, 1074, 1164
MboI GATC 3 cut(s) 526, 1072, 1162
MboII GAAGA 3 cut(s) 83, 176, 977
MfeI CAATTG 3 cut(s) 738, 870, 960
MflI RGATCY 2 cut(s) 526, 1072
MhlI GDGCHC 2 cut(s) 153, 1288
MlsI TGGCCA 1 cut(s) 251
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 1 cut(s) 129
Mox20I TGGCCA 1 cut(s) 251
Mph1103I ATGCAT 1 cut(s) 1269
MroI TCCGGA 1 cut(s) 1075
MroXI GAANNNNTTC 1 cut(s) 567
MscI TGGCCA 1 cut(s) 251
MseI TTAA 3 cut(s) 480, 1238, 1301
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 1 cut(s) 503
MspI CCGG 3 cut(s) 284, 1005, 1076
MspR9I CCNGG 3 cut(s) 462, 588, 828
MunI CAATTG 3 cut(s) 738, 870, 960
Mva1269I GAATGC 1 cut(s) 1185
MvaI CCWGG 3 cut(s) 462, 588, 828
MwoI GCNNNNNNNGC 8 cut(s) 157, 248, 368, 377, 386, 395, 404, 1103
NdeI CATATG 1 cut(s) 755
NdeII GATC 3 cut(s) 526, 1072, 1162
NlaIII CATG 5 cut(s) 225, 388, 799, 982, 1346
NlaIV GGNNCC 2 cut(s) 528, 1074
NmuCI GTSAC 4 cut(s) 464, 574, 895, 995
NsiI ATGCAT 1 cut(s) 1269
PaeR7I CTCGAG 1 cut(s) 1101
PasI CCCWGGG 1 cut(s) 587
PctI GAATGC 1 cut(s) 1185
PdmI GAANNNNTTC 1 cut(s) 567
PfeI GAWTC 5 cut(s) 85, 211, 563, 703, 1120
PfoI TCCNGGA 1 cut(s) 826
PkrI GCNGC 9 cut(s) 124, 238, 241, 373, 376, 379, 448, 682, 1099
PleI GAGTC 1 cut(s) 129
PmaCI CACGTG 1 cut(s) 1178
PmlI CACGTG 1 cut(s) 1178
PpsI GAGTC 1 cut(s) 129
Ppu21I YACGTR 1 cut(s) 1178
PpuMI RGGWCCY 1 cut(s) 412
Psp5II RGGWCCY 1 cut(s) 412
Psp6I CCWGG 3 cut(s) 460, 586, 826
PspCI CACGTG 1 cut(s) 1178
PspGI CCWGG 3 cut(s) 460, 586, 826
PspN4I GGNNCC 2 cut(s) 528, 1074
PspPI GGNCC 2 cut(s) 412, 712
PspPPI RGGWCCY 1 cut(s) 412
PspXI VCTCGAGB 1 cut(s) 1101
PstI CTGCAG 1 cut(s) 376
PsuI RGATCY 2 cut(s) 526, 1072
PvuII CAGCTG 1 cut(s) 503
RsaI GTAC 2 cut(s) 459, 800
RsaNI GTAC 2 cut(s) 458, 799
SaqAI TTAA 3 cut(s) 480, 1238, 1301
SatI GCNGC 9 cut(s) 123, 237, 240, 372, 375, 378, 447, 681, 1098
Sau3AI GATC 3 cut(s) 526, 1072, 1162
Sau96I GGNCC 2 cut(s) 412, 712
SchI GAGTC 1 cut(s) 129
ScrFI CCNGG 3 cut(s) 462, 588, 828
SduI GDGCHC 2 cut(s) 153, 1288
SexAI ACCWGGT 1 cut(s) 460
SfaNI GCATC 6 cut(s) 16, 433, 496, 625, 1117, 1143
SfcI CTRYAG 2 cut(s) 372, 1143
Sfr274I CTCGAG 1 cut(s) 1101
SinI GGWCC 1 cut(s) 412
SlaI CTCGAG 1 cut(s) 1101
SmlI CTYRAG 1 cut(s) 1101
SmoI CTYRAG 1 cut(s) 1101
SsiI CCGC 1 cut(s) 974
SspMI CTAG 2 cut(s) 395, 485
StyD4I CCNGG 3 cut(s) 460, 586, 826
TaaI ACNGT 6 cut(s) 46, 824, 886, 1033, 1084, 1253
TaiI ACGT 1 cut(s) 1180
TaqI TCGA 4 cut(s) 418, 761, 1102, 1329
TaqII GACCGA 1 cut(s) 828
TfiI GAWTC 5 cut(s) 85, 211, 563, 703, 1120
Tru1I TTAA 3 cut(s) 480, 1238, 1301
Tru9I TTAA 3 cut(s) 480, 1238, 1301
TscAI CASTG 5 cut(s) 121, 645, 658, 889, 1000
TseFI GTSAC 4 cut(s) 464, 574, 895, 995
TseI GCWGC 9 cut(s) 122, 236, 239, 371, 374, 377, 446, 680, 1097
Tsp45I GTSAC 4 cut(s) 464, 574, 895, 995
TspDTI ATGAA 2 cut(s) 334, 1331
TspRI CASTG 5 cut(s) 121, 645, 658, 889, 1000
VneI GTGCAC 1 cut(s) 1284
VpaK11BI GGWCC 1 cut(s) 412
XapI RAATTY 3 cut(s) 182, 745, 864
XcmI CCANNNNNNNNNTGG 1 cut(s) 668
XhoI CTCGAG 1 cut(s) 1101
XmiI GTMKAC 1 cut(s) 514
XmnI GAANNNNTTC 1 cut(s) 567
XspI CTAG 2 cut(s) 395, 485
Zsp2I ATGCAT 1 cut(s) 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.