Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002286

Physical Location & Seq

Genomic Coordinates Reverse (-)

78765182 .. 78769990

Gene Structure 4809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021844

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2871 bp

ATGGATGAGAAAGCCGAAGCGTTAGAGGTGGTGGTGAAGGAAGCTGTGGATTTGGAGAACGTACCCATTGAAGAGGTGTTTCTGACCTTGAGGTGTGACGAACATGGACTCACATCTGAGGCTGCTCAGCAGAGGCTGGCCATTTTTGGGTACAACAAGCTTGAGGAGAAGCAGGAAAGTAAGATTTTGAAGTTCTTGGGGTTTATGTGGAACCCTCTCTCATGGGTGATGGAAGCTGCAGCTATCATGGCCATTGCTCTTGCCAATGGAGGAGGAAAGCCTCCAGATTGGCAAGATTTTGTTGGGATCACTACTCTGCTCTTTATCAATTCAACTATAAGTTTTATTGAAGAGAACAACGCTGGAAATGCTGCTGCTGCTCTCATGGCCCGTCTCGCCCCCAAAGCCAAGGTTCTCCGAGATGGGAGGTGGAATGAGGAGGATGCTTCCGTTCTTGTTCCTGGTGATATAATCAGCATTAAGCTTGGGGACATTATTCCAGCAGATGCTCGCCTCCTCGATGGTGATCCACTGAAAATTGATCAGTCTGCACTAACTGGTGAGTCGCTTCCTGTCACCAAAGGCCCTGGTGGCAGTGTGTATTCGGGTTCTACATGCAAACAAGGGGAGATTGAAGCTGTGGTGATTGCCACTGGTGTTCATACCTTTTTCGGCAAGGCTGCTCACCTTGTTGATAGCACGAATCAGCAGGGACACTTTCAAAAGGTCTTGACTGCAATTGGGAATTTCTGTATATGTTCTATCGCTGTGGGAATGGTCGTAGAGATCATAGTCATGTACCCAGTTCAACACAGAAGTTACCGACCTGGTATTGACAACCTGCTTGTGCTACTTATTGGAGGAATTCCCATTGCAATGCCCACAGTTTTATCTGTGACAATGGCTATTGGTTCCCACCGCTTAGCTGAGCAGGGTGCTATCACTAAACGAATGACAGCAATTGAAGAAATGGCGGGCATGGATGTTCTTTGCAGTGACAAAACTGGGACTCTGACATTAAATAAGCTTTCAGTTGACAAGACTCTTTTAGAGGTCTTTGTTAAAGGGGTGGACATAGATACTGTTGTTCTAATGGCAGCTCGAGCTTCACGAATTGAAAATCAAGATGCTATAGATGCTGCTATTGTGGGAATGTTGGCTGATCCAAAGGAGGCAAGAGCCAATATTCAAGAGGTGCACTTCCTTCCATTCAACCCAACTGACAAGCGAACAGCTCTTACATATATTGACCTTGAAGGTAAAATGCATCGTGTCAGCAAAGGTGCACCGGAACAGATTTTGAATCTTGTACCCAATAAATCAGAGCTAGAACGCAGAGTTCATGTTATGATTGATAAATATGCAGAGCGAGGACTAAGATCCCTAGCAGTAGCATACCAGGAAGTTCCAGATGGAAGGAAGGAGAGCCTAGGAGGGCCTTGGCAATTCATTGCACTCATGCCTTTGTTTGATCCTCCTAGACATGACAGTGCAGAGACAATTAAAAGAGCATTGAATCTTGGTGTGAATGTTAAGATGATTACAGGTGATCAGCTCGCAATAGCGAAGGAGACTGGACGCCGTCTCGGTATGGGAACAAACATGTACCCCTCATCAGCTCTTTTGGGACAGAAAAAGGATGAGTCACTTGCTGGTTTGCCAGTTGATGAGCTTATTGAAAAAGCTGATGGATTTGCTGGTGTTTTTCCTGAGCACAAGTATGAGATTGTGAAGCGTTTGCAAGCAAGAGGACATATATGTGGGATGACCGGTGATGGAGTTAATGATGCTCCTGCTCTTAAAAAAGCTGATATTGGCATAGCTGTTGCTGATGCAACTGATGCAGCTCGAAGTGCTTCTGACATTGTACTCACAGAACCTGGCCTCAGTGTCATCATAAGCGCTGTACTAACTAGTCGAGCGATATTCCAGAGAATGAAAAATTACACGATATATGCTGTTTCCATTACAATCCGTATTGTGCTTGGTTTCATGTTACTGGCACTCATATGGCACTTCGACTTTCCACCCTTCATGGTTCTGATCATTGCTATCCTTAATGATGGTACTATCATGACAATTTCGAAGGATAGAGTGAAACCCTCTCCTCTGCCAGACAGTTGGAAACTAGCAGAGATCTTTACCACCGGTATCATCCTTGGTAGTTACCTAGCAGTGATGACGGTCATTTTCTTTTGGGCAGCATATGAAACAGACTTCTTCCCTCGTAAATTTGGCGTTTCAAGCCTTCATAAAAAGCACAACGACAGCTACAGGAAGCTTGCCTCTGCAGTGTACCTGCAAGTGAGTACAATCAGTCAGGCTCTCATATTCGTCACACGAGCGCGTAGTTGGTCTTTTGTGGAGCGTCCTGGTCTATTACTTGTATCAGCTTTTGTTATTGCTCAGCTGATTGCTACACTCATCGCTGTCTATGCCAATTGGAGTTTCGCGGCGATAGAGGGAATTGGGTGGGGTTGGGCTGGTGTTGTTTGGTTATATAACCTCGTCTTCTATCTTCCACTTGATATTATCAAGTTCATCATCCGATATGCACTGAGTGGGAGAGCTTGGGATCTCGTATTTGAGCAGAGGATTGCCTTCACAAGGAAGAAGCATTTTGGGAAGGAAGAAAGGGAGCTCAAATGGGCTCACGCGCAGAGGACTCTCCACGGTCTGCACCCACCGGACACCAAGATGTTCAGTGAACGCACTTCTTACACAGAACTTAATCAGATGGCCGAAGAGGCAAGAAGACGCGCTGAAATTGCCAGACTGAGGGAGATGCGCACCCTGAAAGGGCATGTCGAATCAGTGGTGAGGATGAAGGGCCTGGACATCAACACAATTCAGCAATCATACACTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

957

Amino Acids

105.43

Weight (kDa)

6.61

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	20 - 83	5.3e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	132 - 231	1.1e-29	P-type ATPase actuator domain
Hydrolase	PF00702	327 - 604	4.7e-15	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47950 AT3G47950 AT5G62670
fragaria_vesca	FvH4_5g15700 FvH4_5g15700 FvH4_5g15700 FvH4_5g15700 FvH4_6g49360
malus_domestica	MD06G1186400.v1.1 MD14G1192600.v1.1 MD17G1046600.v1.1
prunus_persica	Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.5G185000_v2.0.a1
pyrus_communis	pycom06g16560 pycom06g16570 pycom14g16020 pycom17g04150
rosa_chinensis	RchiOBHm_Chr2g0169231 RchiOBHm_Chr7g0180411
rosa_laevigata	RLG00000005268 RLG00000021844
rosa_multiflora	Rmu_co8446409.1_g000001 Rmu_sc0003526.1_g000005 Rmu_ssc0000440.1_g000009
rosa_roxburghii	Rroxscaffold_2G00082330 Rroxscaffold_3G00272910
rosa_rugosa	Rorug02G0538400 Rorug06G0432800 Rorug06G0432900 Rorug06G0432900
rosa_samantha	Rh2AG609900 Rh2BG622800 Rh2CG591300 Rh7AG033500 Rh7BG033500 Rh7CG035400 Rh7DG033900
rosa_wichuraiana	Rw2G050570 Rw7G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2789
Acc36I	ACCTGC	2 cut(s)	849, 2307
AccII	CGCG	4 cut(s)	2347, 2453, 2657, 2760
AciI	CCGC	3 cut(s)	919, 974, 2453
AclWI	GGATC	6 cut(s)	314, 521, 1157, 1374, 1466, 2583
AcoI	YGGCCR	3 cut(s)	138, 249, 2739
AcsI	RAATTY	3 cut(s)	745, 864, 2231
AcyI	GRCGYC	1 cut(s)	1579
AdeI	CACNNNGTG	1 cut(s)	2561
AfeI	AGCGCT	1 cut(s)	1903
AfiI	CCNNNNNNNGG	4 cut(s)	147, 2607, 2778, 2799
AflIII	ACRYGT	1 cut(s)	1602
AgeI	ACCGGT	2 cut(s)	1769, 2147
AhlI	ACTAGT	1 cut(s)	1913
AjnI	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2371, 2832
AjuI	GAANNNNNNNTTGG	2 cut(s)	2432, 2464
Alw21I	GWGCWC	4 cut(s)	1200, 1288, 1716, 2643
Alw26I	GTCTC	4 cut(s)	398, 1490, 1565, 1589
Alw44I	GTGCAC	2 cut(s)	1196, 1284
AlwI	GGATC	6 cut(s)	314, 521, 1157, 1374, 1466, 2583
AlwNI	CAGNNNCTG	2 cut(s)	136, 1880
Ama87I	CYCGRG	1 cut(s)	1101
Aor51HI	AGCGCT	1 cut(s)	1903
AoxI	GGCC	8 cut(s)	138, 249, 387, 583, 1436, 1882, 2739, 2830
ApaLI	GTGCAC	2 cut(s)	1196, 1284
ApoI	RAATTY	3 cut(s)	745, 864, 2231
AsiGI	ACCGGT	2 cut(s)	1769, 2147
Asp700I	GAANNNNTTC	1 cut(s)	1855
AspA2I	CCTAGG	1 cut(s)	1429
AspLEI	GCGC	5 cut(s)	1904, 2347, 2659, 2762, 2790
AspS9I	GGNCC	4 cut(s)	388, 584, 1436, 2830
AsuII	TTCGAA	1 cut(s)	2084
AvaI	CYCGRG	1 cut(s)	1101
AvrII	CCTAGG	1 cut(s)	1429
BaeGI	GKGCMC	2 cut(s)	1200, 1288
BaeI	ACNNNNGTAYC	2 cut(s)	1071, 1104
BalI	TGGCCA	2 cut(s)	140, 251
BanII	GRGCYC	2 cut(s)	2643, 2653
BauI	CACGAG	1 cut(s)	2340
BbsI	GAAGAC	2 cut(s)	2503, 2761
Bbv12I	GWGCWC	4 cut(s)	1200, 1288, 1716, 2643
BccI	CCATC	8 cut(s)	223, 416, 515, 1406, 1682, 1769, 2057, 2731
BceAI	ACGGC	1 cut(s)	1566
BciT130I	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
BclI	TGATCA	3 cut(s)	541, 1549, 2043
BcoDI	GTCTC	4 cut(s)	398, 1490, 1565, 1589
BcuI	ACTAGT	1 cut(s)	1913
BfaI	CTAG	7 cut(s)	1328, 1385, 1430, 1479, 1914, 2129, 2171
BfmI	CTRYAG	4 cut(s)	237, 1131, 2272, 2289
BfoI	RGCGCY	1 cut(s)	1905
BfuAI	ACCTGC	2 cut(s)	849, 2307
BglI	GCCNNNNNGGC	2 cut(s)	591, 2747
BglII	AGATCT	1 cut(s)	2136
BlnI	CCTAGG	1 cut(s)	1429
BlpI	GCTNAGC	4 cut(s)	126, 922, 927, 2406
Bme1390I	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
BmeT110I	CYCGRG	1 cut(s)	1101
BmgT120I	GGNCC	4 cut(s)	388, 584, 1436, 2830
BmiI	GGNNCC	2 cut(s)	212, 913
BmrFI	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
BmrI	ACTGGG	2 cut(s)	797, 1014
BmsI	GCATC	9 cut(s)	433, 496, 1117, 1126, 1276, 1777, 1822, 1831, 2775
BmuI	ACTGGG	2 cut(s)	797, 1014
BpiI	GAAGAC	2 cut(s)	2503, 2761
BpmI	CTGGAG	1 cut(s)	267
Bpu10I	CCTNAGC	1 cut(s)	1710
Bpu1102I	GCTNAGC	4 cut(s)	126, 922, 927, 2406
Bpu14I	TTCGAA	1 cut(s)	2084
BpuEI	CTTGAG	2 cut(s)	109, 182
BsaBI	GATNNNNATC	1 cut(s)	525
BsaHI	GRCGYC	1 cut(s)	1579
BsaJI	CCNNGG	6 cut(s)	408, 586, 1429, 1439, 2158, 2671
BsaWI	WCCGGW	4 cut(s)	1288, 1769, 2147, 2686
Bsc4I	CCNNNNNNNGG	4 cut(s)	147, 2607, 2778, 2799
Bse118I	RCCGGY	2 cut(s)	1769, 2147
Bse1I	ACTGG	7 cut(s)	562, 658, 803, 1009, 1579, 1661, 2004
Bse3DI	GCAATG	5 cut(s)	252, 870, 882, 1449, 2046
Bse8I	GATNNNNATC	1 cut(s)	525
BseBI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
BseDI	CCNNGG	6 cut(s)	408, 586, 1429, 1439, 2158, 2671
BseGI	GGATG	8 cut(s)	10, 448, 988, 1645, 1770, 2154, 2544, 2829
BseJI	GATNNNNATC	1 cut(s)	525
BseLI	CCNNNNNNNGG	4 cut(s)	147, 2607, 2778, 2799
BseMI	GCAATG	5 cut(s)	252, 870, 882, 1449, 2046
BseMII	CTCAG	8 cut(s)	108, 140, 918, 1701, 1900, 2420, 2549, 2768
BseNI	ACTGG	7 cut(s)	562, 658, 803, 1009, 1579, 1661, 2004
BseRI	GAGGAG	5 cut(s)	179, 285, 452, 506, 2097
BseSI	GKGCMC	2 cut(s)	1200, 1288
BsgI	GTGCAG	3 cut(s)	534, 1512, 2663
Bsh1236I	CGCG	4 cut(s)	2347, 2453, 2657, 2760
BshFI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2741, 2832
BshTI	ACCGGT	2 cut(s)	1769, 2147
BsiHKAI	GWGCWC	4 cut(s)	1200, 1288, 1716, 2643
BsiHKCI	CYCGRG	1 cut(s)	1101
BsiSI	CCGG	4 cut(s)	1289, 1770, 2148, 2687
BslFI	GGGAC	4 cut(s)	503, 726, 1021, 1641
BslI	CCNNNNNNNGG	4 cut(s)	147, 2607, 2778, 2799
BsmAI	GTCTC	4 cut(s)	398, 1490, 1565, 1589
BsmBI	CGTCTC	2 cut(s)	398, 1589
BsmFI	GGGAC	4 cut(s)	503, 726, 1021, 1641
BsnI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2741, 2832
BsoBI	CYCGRG	1 cut(s)	1101
Bsp119I	TTCGAA	1 cut(s)	2084
Bsp1286I	GDGCHC	5 cut(s)	1200, 1288, 1716, 2643, 2653
Bsp1720I	GCTNAGC	4 cut(s)	126, 922, 927, 2406
BspACI	CCGC	3 cut(s)	919, 974, 2453
BspANI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2741, 2832
BspCNI	CTCAG	8 cut(s)	109, 139, 919, 1702, 1899, 2419, 2550, 2769
BspFNI	CGCG	4 cut(s)	2347, 2453, 2657, 2760
BspHI	TCATGA	1 cut(s)	2073
BspLI	GGNNCC	2 cut(s)	212, 913
BspMAI	CTGCAG	2 cut(s)	241, 2293
BspMI	ACCTGC	2 cut(s)	849, 2307
BspPI	GGATC	6 cut(s)	314, 521, 1157, 1374, 1466, 2583
BspT104I	TTCGAA	1 cut(s)	2084
BsrDI	GCAATG	5 cut(s)	252, 870, 882, 1449, 2046
BsrFI	RCCGGY	2 cut(s)	1769, 2147
BsrI	ACTGG	7 cut(s)	562, 658, 803, 1009, 1579, 1661, 2004
BssAI	RCCGGY	2 cut(s)	1769, 2147
BssECI	CCNNGG	6 cut(s)	408, 586, 1429, 1439, 2158, 2671
BssNI	GRCGYC	1 cut(s)	1579
BssSI	CACGAG	1 cut(s)	2340
BssT1I	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
Bst2BI	CACGAG	1 cut(s)	2340
Bst2UI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
Bst4CI	ACNGT	6 cut(s)	886, 1084, 1490, 2120, 2185, 2675
Bst6I	CTCTTC	3 cut(s)	66, 345, 2739
BstACI	GRCGYC	1 cut(s)	1579
BstAPI	GCANNNNNTGC	1 cut(s)	1841
BstBI	TTCGAA	1 cut(s)	2084
BstC8I	GCNNGC	6 cut(s)	138, 511, 976, 1557, 1743, 2283
BstDSI	CCRYGG	1 cut(s)	2671
BstENI	CCTNNNNNAGG	1 cut(s)	2605
BstF5I	GGATG	8 cut(s)	10, 448, 988, 1645, 1770, 2154, 2544, 2829
BstFNI	CGCG	4 cut(s)	2347, 2453, 2657, 2760
BstH2I	RGCGCY	1 cut(s)	1905
BstHHI	GCGC	5 cut(s)	1904, 2347, 2659, 2762, 2790
BstMAI	GTCTC	4 cut(s)	398, 1490, 1565, 1589
BstNI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
BstNSI	RCATGY	3 cut(s)	618, 1606, 2807
BstSCI	CCNGG	7 cut(s)	460, 586, 826, 1398, 1879, 2371, 2832
BstSFI	CTRYAG	4 cut(s)	237, 1131, 2272, 2289
BstSLI	GKGCMC	2 cut(s)	1200, 1288
BstUI	CGCG	4 cut(s)	2347, 2453, 2657, 2760
BstV2I	GAAGAC	2 cut(s)	2503, 2761
BstX2I	RGATCY	3 cut(s)	1379, 2136, 2575
BstXI	CCANNNNNNTGG	1 cut(s)	2121
BstYI	RGATCY	3 cut(s)	1379, 2136, 2575
BsuRI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2741, 2832
BtgI	CCRYGG	1 cut(s)	2671
BtgZI	GCGATG	1 cut(s)	2410
BtsCI	GGATG	8 cut(s)	10, 448, 988, 1645, 1770, 2154, 2544, 2829
BtsI	GCAGTG	4 cut(s)	601, 1000, 2181, 2298
BveI	ACCTGC	2 cut(s)	849, 2307
Cac8I	GCNNGC	6 cut(s)	138, 511, 976, 1557, 1743, 2283
CaiI	CAGNNNCTG	2 cut(s)	136, 1880
CciI	TCATGA	1 cut(s)	2073
CfoI	GCGC	5 cut(s)	1904, 2347, 2659, 2762, 2790
Cfr10I	RCCGGY	2 cut(s)	1769, 2147
Cfr13I	GGNCC	4 cut(s)	388, 584, 1436, 2830
CseI	GACGC	3 cut(s)	1587, 2357, 2766
CsiI	ACCWGGT	1 cut(s)	826
CspAI	ACCGGT	2 cut(s)	1769, 2147
DraIII	CACNNNGTG	1 cut(s)	2561
EaeI	YGGCCR	3 cut(s)	138, 249, 2739
Eam1104I	CTCTTC	3 cut(s)	66, 345, 2739
EarI	CTCTTC	3 cut(s)	66, 345, 2739
Ecl136II	GAGCTC	1 cut(s)	2641
Eco130I	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
Eco24I	GRGCYC	2 cut(s)	2643, 2653
Eco47III	AGCGCT	1 cut(s)	1903
Eco53kI	GAGCTC	1 cut(s)	2641
Eco88I	CYCGRG	1 cut(s)	1101
EcoICRI	GAGCTC	1 cut(s)	2641
EcoNI	CCTNNNNNAGG	1 cut(s)	2605
EcoO109I	RGGNCCY	3 cut(s)	584, 1436, 2830
EcoRI	GAATTC	1 cut(s)	864
EcoRII	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2371, 2832
EcoT14I	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
EcoT22I	ATGCAT	1 cut(s)	1269
EcoT38I	GRGCYC	2 cut(s)	2643, 2653
ErhI	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
Esp3I	CGTCTC	2 cut(s)	398, 1589
FaqI	GGGAC	4 cut(s)	503, 726, 1021, 1641
FauI	CCCGC	1 cut(s)	967
FauNDI	CATATG	2 cut(s)	2009, 2206
FbaI	TGATCA	3 cut(s)	541, 1549, 2043
FokI	GGATG	8 cut(s)	17, 455, 995, 1652, 1777, 2141, 2531, 2836
FriOI	GRGCYC	2 cut(s)	2643, 2653
FspAI	RTGCGCAY	1 cut(s)	2789
FspBI	CTAG	7 cut(s)	1328, 1385, 1430, 1479, 1914, 2129, 2171
FspI	TGCGCA	1 cut(s)	2789
GlaI	GCGC	5 cut(s)	1903, 2346, 2658, 2761, 2789
GsuI	CTGGAG	1 cut(s)	267
HaeII	RGCGCY	1 cut(s)	1905
HaeIII	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2741, 2832
HapII	CCGG	4 cut(s)	1289, 1770, 2148, 2687
HgaI	GACGC	3 cut(s)	1587, 2357, 2766
HhaI	GCGC	5 cut(s)	1904, 2347, 2659, 2762, 2790
Hin1I	GRCGYC	1 cut(s)	1579
Hin6I	GCGC	5 cut(s)	1902, 2345, 2657, 2760, 2788
HinP1I	GCGC	5 cut(s)	1902, 2345, 2657, 2760, 2788
HincII	GTYRAC	1 cut(s)	1036
HindII	GTYRAC	1 cut(s)	1036
HindIII	AAGCTT	4 cut(s)	158, 482, 1025, 2279
HpaII	CCGG	4 cut(s)	1289, 1770, 2148, 2687
Hpy166II	GTNNAC	6 cut(s)	1036, 1072, 1198, 1286, 2296, 2708
Hpy188I	TCNGA	9 cut(s)	84, 118, 419, 1014, 1324, 1861, 2043, 2549, 2736
Hpy188III	TCNNGA	9 cut(s)	284, 730, 1110, 1124, 1190, 1409, 1709, 1930, 2074
Hpy8I	GTNNAC	6 cut(s)	1036, 1072, 1198, 1286, 2296, 2708
HpyCH4III	ACNGT	6 cut(s)	886, 1084, 1490, 2120, 2185, 2675
HpyCH4IV	ACGT	1 cut(s)	60
HpySE526I	ACGT	1 cut(s)	60
Hsp92I	GRCGYC	1 cut(s)	1579
HspAI	GCGC	5 cut(s)	1902, 2345, 2657, 2760, 2788
Ksp22I	TGATCA	3 cut(s)	541, 1549, 2043
LmnI	GCTCC	3 cut(s)	1795, 2365, 2638
LweI	GCATC	9 cut(s)	433, 496, 1117, 1126, 1276, 1777, 1822, 1831, 2775
MabI	ACCWGGT	1 cut(s)	826
MaeI	CTAG	7 cut(s)	1328, 1385, 1430, 1479, 1914, 2129, 2171
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	9 cut(s)	95, 574, 818, 895, 995, 1644, 1995, 2165, 2335
MfeI	CAATTG	3 cut(s)	738, 960, 2440
MflI	RGATCY	3 cut(s)	1379, 2136, 2575
MhlI	GDGCHC	5 cut(s)	1200, 1288, 1716, 2643, 2653
MlsI	TGGCCA	2 cut(s)	140, 251
MluNI	TGGCCA	2 cut(s)	140, 251
MlyI	GAGTC	6 cut(s)	102, 572, 1003, 1036, 1652, 2659
MmeI	TCCRAC	1 cut(s)	2102
Mox20I	TGGCCA	2 cut(s)	140, 251
Mph1103I	ATGCAT	1 cut(s)	1269
MroXI	GAANNNNTTC	1 cut(s)	1855
MscI	TGGCCA	2 cut(s)	140, 251
MseI	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2730
MslI	CAYNNNNRTG	7 cut(s)	794, 875, 1488, 1719, 1758, 2008, 2696
Msp20I	TGGCCA	2 cut(s)	140, 251
MspA1I	CMGCKG	1 cut(s)	2410
MspI	CCGG	4 cut(s)	1289, 1770, 2148, 2687
MspR9I	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
MunI	CAATTG	3 cut(s)	738, 960, 2440
MvaI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
MvnI	CGCG	4 cut(s)	2347, 2453, 2657, 2760
NdeI	CATATG	2 cut(s)	2009, 2206
NlaIV	GGNNCC	2 cut(s)	212, 913
NmuCI	GTSAC	6 cut(s)	95, 574, 895, 995, 1644, 2335
NsbI	TGCGCA	1 cut(s)	2789
NsiI	ATGCAT	1 cut(s)	1269
NspI	RCATGY	3 cut(s)	618, 1606, 2807
NspV	TTCGAA	1 cut(s)	2084
PaeR7I	CTCGAG	1 cut(s)	1101
PagI	TCATGA	1 cut(s)	2073
PciI	ACATGT	1 cut(s)	1602
PcsI	WCGNNNNNNNCGW	1 cut(s)	1108
PdmI	GAANNNNTTC	1 cut(s)	1855
PfeI	GAWTC	4 cut(s)	703, 1303, 1516, 2810
PflFI	GACNNNGTC	1 cut(s)	1581
PinAI	ACCGGT	2 cut(s)	1769, 2147
PleI	GAGTC	6 cut(s)	102, 571, 1003, 1036, 1651, 2659
PpsI	GAGTC	6 cut(s)	102, 571, 1003, 1036, 1651, 2659
PscI	ACATGT	1 cut(s)	1602
Psp124BI	GAGCTC	1 cut(s)	2643
Psp6I	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2371, 2832
PspGI	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2371, 2832
PspN4I	GGNNCC	2 cut(s)	212, 913
PspPI	GGNCC	4 cut(s)	388, 584, 1436, 2830
PspXI	VCTCGAGB	1 cut(s)	1101
PsrI	GAACNNNNNNTAC	2 cut(s)	1222, 1254
PstI	CTGCAG	2 cut(s)	241, 2293
PstNI	CAGNNNCTG	2 cut(s)	136, 1880
PsuI	RGATCY	3 cut(s)	1379, 2136, 2575
PsyI	GACNNNGTC	1 cut(s)	1581
PvuII	CAGCTG	1 cut(s)	2410
RseI	CAYNNNNRTG	7 cut(s)	794, 875, 1488, 1719, 1758, 2008, 2696
SacI	GAGCTC	1 cut(s)	2643
SaqAI	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2730
Sau96I	GGNCC	4 cut(s)	388, 584, 1436, 2830
SchI	GAGTC	6 cut(s)	102, 572, 1003, 1036, 1652, 2659
ScrFI	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2373, 2834
SduI	GDGCHC	5 cut(s)	1200, 1288, 1716, 2643, 2653
SexAI	ACCWGGT	1 cut(s)	826
SfaNI	GCATC	9 cut(s)	433, 496, 1117, 1126, 1276, 1777, 1822, 1831, 2775
SfcI	CTRYAG	4 cut(s)	237, 1131, 2272, 2289
Sfr274I	CTCGAG	1 cut(s)	1101
SfuI	TTCGAA	1 cut(s)	2084
SlaI	CTCGAG	1 cut(s)	1101
SmiMI	CAYNNNNRTG	7 cut(s)	794, 875, 1488, 1719, 1758, 2008, 2696
SmlI	CTYRAG	3 cut(s)	88, 161, 1101
SmoI	CTYRAG	3 cut(s)	88, 161, 1101
SpeI	ACTAGT	1 cut(s)	1913
SsiI	CCGC	3 cut(s)	919, 974, 2453
SspI	AATATT	1 cut(s)	1186
SspMI	CTAG	7 cut(s)	1328, 1385, 1430, 1479, 1914, 2129, 2171
SstI	GAGCTC	1 cut(s)	2643
StyD4I	CCNGG	7 cut(s)	460, 586, 826, 1398, 1879, 2371, 2832
StyI	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
TaaI	ACNGT	6 cut(s)	886, 1084, 1490, 2120, 2185, 2675
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	7 cut(s)	519, 1102, 1849, 1918, 2019, 2084, 2808
TatI	WGTACW	3 cut(s)	1867, 1906, 2309
TauI	GCSGC	1 cut(s)	2456
TfiI	GAWTC	4 cut(s)	703, 1303, 1516, 2810
Tru1I	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2730
Tru9I	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2730
TseFI	GTSAC	6 cut(s)	95, 574, 895, 995, 1644, 2335
Tsp45I	GTSAC	6 cut(s)	95, 574, 895, 995, 1644, 2335
TspGWI	ACGGA	2 cut(s)	439, 1964
Tth111I	GACNNNGTC	1 cut(s)	1581
VneI	GTGCAC	2 cut(s)	1196, 1284
XagI	CCTNNNNNAGG	1 cut(s)	2605
XapI	RAATTY	3 cut(s)	745, 864, 2231
XceI	RCATGY	3 cut(s)	618, 1606, 2807
XhoI	CTCGAG	1 cut(s)	1101
XmaJI	CCTAGG	1 cut(s)	1429
XmnI	GAANNNNTTC	1 cut(s)	1855
XspI	CTAG	7 cut(s)	1328, 1385, 1430, 1479, 1914, 2129, 2171
Zsp2I	ATGCAT	1 cut(s)	1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.