Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002286

Physical Location & Seq

Genomic Coordinates Reverse (-)

83436058 .. 83441144

Gene Structure 5087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53684

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

ATGGATGAGAAAGCCGAAGCGTTAGAGGCGGTGGTGAAGGAAGCAGTGGATTTGGAGAACGTACCCATTGAAGAGGTGTTTCTGACCTTGAGGTGTGACGAACATGGACTCACATCTGAGGCTGCTCAGCAGAGGCTGGCCATTTTTGGGTACAACAAGCTTGAGGAGAAGCAGGAAAGTAAGATTTTGAAGTTCTTGGGGTTTATGTGGAACCCTCTCTCATGGGTGATGGAAGCTGCAGCTATCATGGCCATTGCTCTTGCCAATGGAGGAGGAAAGCCTCCAGATTGGCAAGACTTTGTTGGGATCATTACTCTGCTCTTTATCAATTCAACTATAAGTTTTATTGAAGAGAACAACGCTGGAAATGCTGCTGCTGCTCTCATGGCCCGTCTCGCCCCCAAAGCCAAGGTTCTCCGAGATGGGAAGTGGAATGAGGAGGATGCTTCCGTTCTTGTTCCTGGTGATATAATCAGCATTAAGCTTGGGGACATTATTCCAGCAGATGCTCGCCTCCTCGATGGTGATCCACTGAAAATTGATCAGTCTGCACTAACCGGTGAGTCGCTTCCTGTCACCAAAGGCCCTGGTGGCAGTGTGTATTCGGGTTCTACATGCAAACAAGGAGAGATTGAAGCTGTGGTGATTGCCACTGGTGTTCATACCTTTTTCGGCAAGGCTGCTCACCTTGTTGATAGCACGAATCAACAGGGACACTTTCAAAAGGTCTTGACTGCAATTGGGAATTTCTGTATATGTTCTATCGCTGTGGGAATGGTCGTAGAGATCATAGTCATGTACCCAGTTCAACACAGAAGTTACCGACCTGGTATTGACAACCTGCTTGTGCTACTTATTGGAGGAATTCCCATTGCAATGCCCACAGTTTTATCTGTGACAATGGCTATTGGTTCCCACCGCTTAGCTGAGCAGGGTGCTATCACTAAACGAATGACGGCAATTGAAGAAATGGCAGGCATGGATGTTCTTTGCAGTGACAAAACTGGGACTCTGACATTAAATAAGCTTTCAGTTGACAAGACTCTTTTAGAGGTCTTTGTTAAAGGGGTGGACATAGATACTGTTGTTCTAATGGCAGCTCGAGCTTCACGAATCGAAAATCAAGATGCTATAGATGCTGCTATTGTGGGAATGTTGGCTGATCCAAAGGAGGCAAGAGCCAATATTCAAGAGGTGCACTTCCTTCCATTCAACCCAACTGACAAGCGAACAGCTCTTACATATATTGACCTTGAAGGTAAAATGCATCGTGTCAGCAAAGGTGCACCAGAACAGATTTTGAATCTTGTACCCAATAAATCAGAGCTAGAACGTAGAGTTCATGTTATGATTGATAAATACGCGGAGCGAGGACTAAGATCCCTAGCAGTAGCATACCAGGAAGTTCCAGATGGAAGGAAGGAGAGCCTTGGAGGGCCTTGGCAATTCATTGCACTCATGCCTTTGTTTGATCCTCCGAGACATGACAGTGCAGAGACAATTAAAAGAGCATTGAATCTTGGTGTGAATGTTAAGATGATCACAGGTGATCAGCTCGCAATAGCGAAGGAGACAGGACGCCGTCTTGGTATGGGAACAAACATGTACCCCTCATCAGCTCTTTTGGGACAGAAAAAGGATGAGTCACTTGCTGGTTTGCCAGTTGATGAGCTTATTGAAAAAGCTGATGGATTTGCTGGTGTTTTTCCTGAGCACAAGTACGAGATTGTGAAGCGTTTGCAAGCAAGAGGACATATATGTGGGATGACCGGTGATGGAGTTAATGATGCTCCTGCTCTTAAAAAAGCTGATATTGGCATAGCTGTTGCTGATGCAACTGATGCAGCTCGAAGTGCTTCTGACATTGTACTCACAGAACCTGGCCTTAGTGTCATCATAAGCGCTGTACTAACTAGTCGAGCTATATTCCAGAGAATGAAAAATTACACGATATATGCTGTTTCCATTACAATCCGTATTGTGCTTGGTTTCATGTTACTGGCACTCATATGGCACTTCGACTTTCCACCCTTCATGGTTCTGATCATTGCTATCCTTAATGATGGTACTATCATGACAATTTCGAAGGATAGAGTGAAACCCTCTCCTCTGCCAGACAGTTGGAAACTAGCAGAGATCTTTACCACCGGTATTATCCTTGGTAGTTACCTAGCGGTGATGACAGTCATTTTCTTTTGGGCAGCATACGAAACAGACTTCTTCCCTCGTAAATTTGGGGTTTCAAGCCTTCAGAAAAAGCATATCGAGCATAACGATAGCTACAGGAAGCTTGCCGCTGCAGTGTACCTGCAAGTGAGTACAATCAGTCAGGCTCTCATATTCGTCACACGAGCGCGTAGTTGGTCTTTTGTGGAGCGTCCTGGTCTATTACTTGTATCAGCTTTTGTTATTGCTCAGCTGATTGCTACACTCATCGCTGTCTATGCCGATTGGAGTTTCGCGGCGATAAAGGGAATTGGGTGGGGTTGGGCTGGTGTTATTTGGTTATATAACCTCGTCTTCTATCTTCCACTTGATATTATCAAGTTCATCATCCGATATGCACTGAGTGGGAGAGCTTGGGATCTCGTATTTGAGCAGAGGACTGCCTTCACAAGGAAGAAGCATTTTGGGAAGGAAGAAAGGGAGCTCAAATGGGCTCACGCGCAGAGGACTCTCCACGGTCTGCACCCACCGGACACCAAGATGTTCGGTGAACGCGCTTCTTACACAGAACTTAATCAGATGGCCGAAGAGGCAAGAAGACGCGCTGAAATTGCCAGACTGAGGGAGATGCGCACCCTGAAAGGGCATGTCGAATCAGTGGTGAGGATGAAGGGCCTGGACATCAACACAATTCAGCAATCATACACTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

959

Amino Acids

105.68

Weight (kDa)

6.61

Isoelectric Point (pI)

36.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	20 - 83	5.3e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	132 - 231	6.5e-30	P-type ATPase actuator domain
Hydrolase	PF00702	327 - 604	4.8e-15	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47950 AT3G47950 AT5G62670
fragaria_vesca	FvH4_5g15700 FvH4_5g15700 FvH4_5g15700 FvH4_5g15700 FvH4_6g49360
malus_domestica	MD06G1186400.v1.1 MD14G1192600.v1.1 MD17G1046600.v1.1
prunus_persica	Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.3G272500_v2.0.a1 Prupe.5G185000_v2.0.a1
pyrus_communis	pycom06g16560 pycom06g16570 pycom14g16020 pycom17g04150
rosa_chinensis	RchiOBHm_Chr2g0169231 RchiOBHm_Chr7g0180411
rosa_laevigata	RLG00000005268 RLG00000021844
rosa_multiflora	Rmu_co8446409.1_g000001 Rmu_sc0003526.1_g000005 Rmu_ssc0000440.1_g000009
rosa_roxburghii	Rroxscaffold_2G00082330 Rroxscaffold_3G00272910
rosa_rugosa	Rorug02G0538400 Rorug06G0432800 Rorug06G0432900 Rorug06G0432900
rosa_samantha	Rh2AG609900 Rh2BG622800 Rh2CG591300 Rh7AG033500 Rh7BG033500 Rh7CG035400 Rh7DG033900
rosa_wichuraiana	Rw2G050570 Rw7G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2798
Acc36I	ACCTGC	2 cut(s)	849, 2316
AccII	CGCG	6 cut(s)	1364, 2356, 2462, 2666, 2721, 2769
AciI	CCGC	6 cut(s)	29, 919, 1364, 2174, 2295, 2462
AclWI	GGATC	6 cut(s)	314, 521, 1157, 1374, 1466, 2592
AcoI	YGGCCR	3 cut(s)	138, 249, 2748
AcsI	RAATTY	3 cut(s)	745, 864, 2231
AcuI	CTGAAG	1 cut(s)	2234
AcyI	GRCGYC	1 cut(s)	1579
AdeI	CACNNNGTG	1 cut(s)	2570
AfeI	AGCGCT	1 cut(s)	1903
AfiI	CCNNNNNNNGG	4 cut(s)	147, 2616, 2787, 2808
AflIII	ACRYGT	1 cut(s)	1602
AgeI	ACCGGT	3 cut(s)	557, 1769, 2147
AhlI	ACTAGT	1 cut(s)	1913
AjnI	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2380, 2841
Alw21I	GWGCWC	4 cut(s)	1200, 1288, 1716, 2652
Alw26I	GTCTC	4 cut(s)	398, 1474, 1490, 1565
Alw44I	GTGCAC	2 cut(s)	1196, 1284
AlwI	GGATC	6 cut(s)	314, 521, 1157, 1374, 1466, 2592
AlwNI	CAGNNNCTG	2 cut(s)	136, 1880
Ama87I	CYCGRG	1 cut(s)	1101
Aor51HI	AGCGCT	1 cut(s)	1903
AoxI	GGCC	8 cut(s)	138, 249, 387, 583, 1436, 1882, 2748, 2839
ApaLI	GTGCAC	2 cut(s)	1196, 1284
ApoI	RAATTY	3 cut(s)	745, 864, 2231
AsiGI	ACCGGT	3 cut(s)	557, 1769, 2147
Asp700I	GAANNNNTTC	1 cut(s)	1855
AspLEI	GCGC	6 cut(s)	1904, 2356, 2668, 2723, 2771, 2799
AspS9I	GGNCC	4 cut(s)	388, 584, 1436, 2839
AsuII	TTCGAA	1 cut(s)	2084
AvaI	CYCGRG	1 cut(s)	1101
BaeGI	GKGCMC	2 cut(s)	1200, 1288
BaeI	ACNNNNGTAYC	2 cut(s)	1071, 1104
BalI	TGGCCA	2 cut(s)	140, 251
BanII	GRGCYC	2 cut(s)	2652, 2662
BauI	CACGAG	1 cut(s)	2349
BbsI	GAAGAC	2 cut(s)	2512, 2770
Bbv12I	GWGCWC	4 cut(s)	1200, 1288, 1716, 2652
BccI	CCATC	8 cut(s)	223, 416, 515, 1406, 1682, 1769, 2057, 2740
BceAI	ACGGC	2 cut(s)	972, 1566
BciT130I	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
BclI	TGATCA	4 cut(s)	541, 1539, 1549, 2043
BcoDI	GTCTC	4 cut(s)	398, 1474, 1490, 1565
BcuI	ACTAGT	1 cut(s)	1913
BfaI	CTAG	5 cut(s)	1328, 1385, 1914, 2129, 2171
BfmI	CTRYAG	4 cut(s)	237, 1131, 2281, 2298
BfoI	RGCGCY	1 cut(s)	1905
BfuAI	ACCTGC	2 cut(s)	849, 2316
BglI	GCCNNNNNGGC	2 cut(s)	591, 2756
BglII	AGATCT	1 cut(s)	2136
BlpI	GCTNAGC	4 cut(s)	126, 922, 927, 2415
Bme1390I	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
BmeT110I	CYCGRG	1 cut(s)	1101
BmgT120I	GGNCC	4 cut(s)	388, 584, 1436, 2839
BmiI	GGNNCC	2 cut(s)	212, 913
BmrFI	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
BmrI	ACTGGG	2 cut(s)	797, 1014
BmsI	GCATC	9 cut(s)	433, 496, 1117, 1126, 1276, 1777, 1822, 1831, 2784
BmuI	ACTGGG	2 cut(s)	797, 1014
BpiI	GAAGAC	2 cut(s)	2512, 2770
BpmI	CTGGAG	1 cut(s)	267
Bpu10I	CCTNAGC	1 cut(s)	1710
Bpu1102I	GCTNAGC	4 cut(s)	126, 922, 927, 2415
Bpu14I	TTCGAA	1 cut(s)	2084
BpuEI	CTTGAG	2 cut(s)	109, 182
BsaBI	GATNNNNATC	1 cut(s)	525
BsaHI	GRCGYC	1 cut(s)	1579
BsaJI	CCNNGG	6 cut(s)	408, 586, 1429, 1439, 2158, 2680
BsaWI	WCCGGW	4 cut(s)	557, 1769, 2147, 2695
Bsc4I	CCNNNNNNNGG	4 cut(s)	147, 2616, 2787, 2808
Bse118I	RCCGGY	3 cut(s)	557, 1769, 2147
Bse1I	ACTGG	5 cut(s)	658, 803, 1009, 1661, 2004
Bse3DI	GCAATG	5 cut(s)	252, 870, 882, 1449, 2046
Bse8I	GATNNNNATC	1 cut(s)	525
BseBI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
BseDI	CCNNGG	6 cut(s)	408, 586, 1429, 1439, 2158, 2680
BseGI	GGATG	7 cut(s)	10, 448, 988, 1645, 1770, 2553, 2838
BseJI	GATNNNNATC	1 cut(s)	525
BseLI	CCNNNNNNNGG	4 cut(s)	147, 2616, 2787, 2808
BseMI	GCAATG	5 cut(s)	252, 870, 882, 1449, 2046
BseMII	CTCAG	7 cut(s)	108, 140, 918, 1701, 2429, 2558, 2777
BseNI	ACTGG	5 cut(s)	658, 803, 1009, 1661, 2004
BseRI	GAGGAG	5 cut(s)	179, 285, 452, 506, 2097
BseSI	GKGCMC	2 cut(s)	1200, 1288
BsgI	GTGCAG	3 cut(s)	534, 1512, 2672
Bsh1236I	CGCG	6 cut(s)	1364, 2356, 2462, 2666, 2721, 2769
BshFI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2750, 2841
BshTI	ACCGGT	3 cut(s)	557, 1769, 2147
BsiHKAI	GWGCWC	4 cut(s)	1200, 1288, 1716, 2652
BsiHKCI	CYCGRG	1 cut(s)	1101
BsiSI	CCGG	4 cut(s)	558, 1770, 2148, 2696
BslFI	GGGAC	4 cut(s)	503, 726, 1021, 1641
BslI	CCNNNNNNNGG	4 cut(s)	147, 2616, 2787, 2808
BsmAI	GTCTC	4 cut(s)	398, 1474, 1490, 1565
BsmBI	CGTCTC	1 cut(s)	398
BsmFI	GGGAC	4 cut(s)	503, 726, 1021, 1641
BsnI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2750, 2841
BsoBI	CYCGRG	1 cut(s)	1101
Bsp119I	TTCGAA	1 cut(s)	2084
Bsp1286I	GDGCHC	5 cut(s)	1200, 1288, 1716, 2652, 2662
Bsp1720I	GCTNAGC	4 cut(s)	126, 922, 927, 2415
BspACI	CCGC	6 cut(s)	29, 919, 1364, 2174, 2295, 2462
BspANI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2750, 2841
BspCNI	CTCAG	7 cut(s)	109, 139, 919, 1702, 2428, 2559, 2778
BspFNI	CGCG	6 cut(s)	1364, 2356, 2462, 2666, 2721, 2769
BspHI	TCATGA	1 cut(s)	2073
BspLI	GGNNCC	2 cut(s)	212, 913
BspMAI	CTGCAG	2 cut(s)	241, 2302
BspMI	ACCTGC	2 cut(s)	849, 2316
BspPI	GGATC	6 cut(s)	314, 521, 1157, 1374, 1466, 2592
BspT104I	TTCGAA	1 cut(s)	2084
BsrDI	GCAATG	5 cut(s)	252, 870, 882, 1449, 2046
BsrFI	RCCGGY	3 cut(s)	557, 1769, 2147
BsrI	ACTGG	5 cut(s)	658, 803, 1009, 1661, 2004
BssAI	RCCGGY	3 cut(s)	557, 1769, 2147
BssECI	CCNNGG	6 cut(s)	408, 586, 1429, 1439, 2158, 2680
BssNI	GRCGYC	1 cut(s)	1579
BssSI	CACGAG	1 cut(s)	2349
BssT1I	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
Bst2BI	CACGAG	1 cut(s)	2349
Bst2UI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
Bst4CI	ACNGT	6 cut(s)	886, 1084, 1490, 2120, 2185, 2684
Bst6I	CTCTTC	3 cut(s)	66, 345, 2748
BstACI	GRCGYC	1 cut(s)	1579
BstAPI	GCANNNNNTGC	1 cut(s)	1841
BstBI	TTCGAA	1 cut(s)	2084
BstC8I	GCNNGC	6 cut(s)	138, 511, 976, 1557, 1743, 2292
BstDSI	CCRYGG	1 cut(s)	2680
BstENI	CCTNNNNNAGG	1 cut(s)	2614
BstF5I	GGATG	7 cut(s)	10, 448, 988, 1645, 1770, 2553, 2838
BstFNI	CGCG	6 cut(s)	1364, 2356, 2462, 2666, 2721, 2769
BstH2I	RGCGCY	1 cut(s)	1905
BstHHI	GCGC	6 cut(s)	1904, 2356, 2668, 2723, 2771, 2799
BstMAI	GTCTC	4 cut(s)	398, 1474, 1490, 1565
BstNI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
BstNSI	RCATGY	3 cut(s)	618, 1606, 2816
BstSCI	CCNGG	7 cut(s)	460, 586, 826, 1398, 1879, 2380, 2841
BstSFI	CTRYAG	4 cut(s)	237, 1131, 2281, 2298
BstSLI	GKGCMC	2 cut(s)	1200, 1288
BstUI	CGCG	6 cut(s)	1364, 2356, 2462, 2666, 2721, 2769
BstV2I	GAAGAC	2 cut(s)	2512, 2770
BstX2I	RGATCY	3 cut(s)	1379, 2136, 2584
BstXI	CCANNNNNNTGG	1 cut(s)	2121
BstYI	RGATCY	3 cut(s)	1379, 2136, 2584
BsuRI	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2750, 2841
BtgI	CCRYGG	1 cut(s)	2680
BtgZI	GCGATG	1 cut(s)	2419
BtsCI	GGATG	7 cut(s)	10, 448, 988, 1645, 1770, 2553, 2838
BtsI	GCAGTG	4 cut(s)	51, 601, 1000, 2307
BtsIMutI	CAGTG	9 cut(s)	51, 530, 601, 651, 1000, 1495, 2307, 2564, 2829
BveI	ACCTGC	2 cut(s)	849, 2316
Cac8I	GCNNGC	6 cut(s)	138, 511, 976, 1557, 1743, 2292
CaiI	CAGNNNCTG	2 cut(s)	136, 1880
CciI	TCATGA	1 cut(s)	2073
CfoI	GCGC	6 cut(s)	1904, 2356, 2668, 2723, 2771, 2799
Cfr10I	RCCGGY	3 cut(s)	557, 1769, 2147
Cfr13I	GGNCC	4 cut(s)	388, 584, 1436, 2839
CseI	GACGC	3 cut(s)	1587, 2366, 2775
CsiI	ACCWGGT	1 cut(s)	826
CspAI	ACCGGT	3 cut(s)	557, 1769, 2147
DraIII	CACNNNGTG	1 cut(s)	2570
EaeI	YGGCCR	3 cut(s)	138, 249, 2748
Eam1104I	CTCTTC	3 cut(s)	66, 345, 2748
EarI	CTCTTC	3 cut(s)	66, 345, 2748
Ecl136II	GAGCTC	1 cut(s)	2650
Eco130I	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
Eco24I	GRGCYC	2 cut(s)	2652, 2662
Eco47III	AGCGCT	1 cut(s)	1903
Eco53kI	GAGCTC	1 cut(s)	2650
Eco57I	CTGAAG	1 cut(s)	2234
Eco88I	CYCGRG	1 cut(s)	1101
EcoICRI	GAGCTC	1 cut(s)	2650
EcoNI	CCTNNNNNAGG	1 cut(s)	2614
EcoO109I	RGGNCCY	3 cut(s)	584, 1436, 2839
EcoRI	GAATTC	1 cut(s)	864
EcoRII	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2380, 2841
EcoT14I	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
EcoT22I	ATGCAT	1 cut(s)	1269
EcoT38I	GRGCYC	2 cut(s)	2652, 2662
ErhI	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
Esp3I	CGTCTC	1 cut(s)	398
FaqI	GGGAC	4 cut(s)	503, 726, 1021, 1641
FauNDI	CATATG	1 cut(s)	2009
FbaI	TGATCA	4 cut(s)	541, 1539, 1549, 2043
FokI	GGATG	7 cut(s)	17, 455, 995, 1652, 1777, 2540, 2845
FriOI	GRGCYC	2 cut(s)	2652, 2662
FspAI	RTGCGCAY	1 cut(s)	2798
FspBI	CTAG	5 cut(s)	1328, 1385, 1914, 2129, 2171
FspI	TGCGCA	1 cut(s)	2798
GlaI	GCGC	6 cut(s)	1903, 2355, 2667, 2722, 2770, 2798
GsuI	CTGGAG	1 cut(s)	267
HaeII	RGCGCY	1 cut(s)	1905
HaeIII	GGCC	8 cut(s)	140, 251, 389, 585, 1438, 1884, 2750, 2841
HapII	CCGG	4 cut(s)	558, 1770, 2148, 2696
HgaI	GACGC	3 cut(s)	1587, 2366, 2775
HhaI	GCGC	6 cut(s)	1904, 2356, 2668, 2723, 2771, 2799
Hin1I	GRCGYC	1 cut(s)	1579
Hin6I	GCGC	6 cut(s)	1902, 2354, 2666, 2721, 2769, 2797
HinP1I	GCGC	6 cut(s)	1902, 2354, 2666, 2721, 2769, 2797
HincII	GTYRAC	1 cut(s)	1036
HindII	GTYRAC	1 cut(s)	1036
HindIII	AAGCTT	4 cut(s)	158, 482, 1025, 2288
HpaII	CCGG	4 cut(s)	558, 1770, 2148, 2696
Hpy166II	GTNNAC	6 cut(s)	1036, 1072, 1198, 1286, 2305, 2717
Hpy188III	TCNNGA	9 cut(s)	284, 730, 1110, 1124, 1190, 1409, 1709, 1930, 2074
Hpy8I	GTNNAC	6 cut(s)	1036, 1072, 1198, 1286, 2305, 2717
HpyCH4III	ACNGT	6 cut(s)	886, 1084, 1490, 2120, 2185, 2684
HpyCH4IV	ACGT	2 cut(s)	60, 1333
HpySE526I	ACGT	2 cut(s)	60, 1333
Hsp92I	GRCGYC	1 cut(s)	1579
HspAI	GCGC	6 cut(s)	1902, 2354, 2666, 2721, 2769, 2797
Ksp22I	TGATCA	4 cut(s)	541, 1539, 1549, 2043
LmnI	GCTCC	4 cut(s)	1366, 1795, 2374, 2647
LweI	GCATC	9 cut(s)	433, 496, 1117, 1126, 1276, 1777, 1822, 1831, 2784
MabI	ACCWGGT	1 cut(s)	826
MaeI	CTAG	5 cut(s)	1328, 1385, 1914, 2129, 2171
MaeII	ACGT	2 cut(s)	60, 1333
MaeIII	GTNAC	9 cut(s)	95, 574, 818, 895, 995, 1644, 1995, 2165, 2344
MfeI	CAATTG	2 cut(s)	738, 960
MflI	RGATCY	3 cut(s)	1379, 2136, 2584
MhlI	GDGCHC	5 cut(s)	1200, 1288, 1716, 2652, 2662
MlsI	TGGCCA	2 cut(s)	140, 251
MluNI	TGGCCA	2 cut(s)	140, 251
MlyI	GAGTC	6 cut(s)	102, 572, 1003, 1036, 1652, 2668
MmeI	TCCRAC	1 cut(s)	2102
Mox20I	TGGCCA	2 cut(s)	140, 251
Mph1103I	ATGCAT	1 cut(s)	1269
MroXI	GAANNNNTTC	1 cut(s)	1855
MscI	TGGCCA	2 cut(s)	140, 251
MseI	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2739
MslI	CAYNNNNRTG	6 cut(s)	794, 875, 1488, 1758, 2008, 2705
Msp20I	TGGCCA	2 cut(s)	140, 251
MspA1I	CMGCKG	2 cut(s)	2297, 2419
MspI	CCGG	4 cut(s)	558, 1770, 2148, 2696
MspR9I	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
MunI	CAATTG	2 cut(s)	738, 960
MvaI	CCWGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
MvnI	CGCG	6 cut(s)	1364, 2356, 2462, 2666, 2721, 2769
NdeI	CATATG	1 cut(s)	2009
NlaIV	GGNNCC	2 cut(s)	212, 913
NmuCI	GTSAC	6 cut(s)	95, 574, 895, 995, 1644, 2344
NsbI	TGCGCA	1 cut(s)	2798
NsiI	ATGCAT	1 cut(s)	1269
NspI	RCATGY	3 cut(s)	618, 1606, 2816
NspV	TTCGAA	1 cut(s)	2084
PaeR7I	CTCGAG	1 cut(s)	1101
PagI	TCATGA	1 cut(s)	2073
PciI	ACATGT	1 cut(s)	1602
PcsI	WCGNNNNNNNCGW	2 cut(s)	1108, 2271
PdmI	GAANNNNTTC	1 cut(s)	1855
PfeI	GAWTC	5 cut(s)	703, 1113, 1303, 1516, 2819
PflFI	GACNNNGTC	1 cut(s)	1581
PinAI	ACCGGT	3 cut(s)	557, 1769, 2147
PleI	GAGTC	6 cut(s)	102, 571, 1003, 1036, 1651, 2668
PpsI	GAGTC	6 cut(s)	102, 571, 1003, 1036, 1651, 2668
PscI	ACATGT	1 cut(s)	1602
Psp124BI	GAGCTC	1 cut(s)	2652
Psp6I	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2380, 2841
PspGI	CCWGG	7 cut(s)	460, 586, 826, 1398, 1879, 2380, 2841
PspN4I	GGNNCC	2 cut(s)	212, 913
PspPI	GGNCC	4 cut(s)	388, 584, 1436, 2839
PspXI	VCTCGAGB	1 cut(s)	1101
PsrI	GAACNNNNNNTAC	2 cut(s)	1222, 1254
PstI	CTGCAG	2 cut(s)	241, 2302
PstNI	CAGNNNCTG	2 cut(s)	136, 1880
PsuI	RGATCY	3 cut(s)	1379, 2136, 2584
PsyI	GACNNNGTC	1 cut(s)	1581
PvuII	CAGCTG	1 cut(s)	2419
RseI	CAYNNNNRTG	6 cut(s)	794, 875, 1488, 1758, 2008, 2705
SacI	GAGCTC	1 cut(s)	2652
SaqAI	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2739
Sau96I	GGNCC	4 cut(s)	388, 584, 1436, 2839
SchI	GAGTC	6 cut(s)	102, 572, 1003, 1036, 1652, 2668
ScrFI	CCNGG	7 cut(s)	462, 588, 828, 1400, 1881, 2382, 2843
SduI	GDGCHC	5 cut(s)	1200, 1288, 1716, 2652, 2662
SexAI	ACCWGGT	1 cut(s)	826
SfaNI	GCATC	9 cut(s)	433, 496, 1117, 1126, 1276, 1777, 1822, 1831, 2784
SfcI	CTRYAG	4 cut(s)	237, 1131, 2281, 2298
Sfr274I	CTCGAG	1 cut(s)	1101
SfuI	TTCGAA	1 cut(s)	2084
SlaI	CTCGAG	1 cut(s)	1101
SmiMI	CAYNNNNRTG	6 cut(s)	794, 875, 1488, 1758, 2008, 2705
SmlI	CTYRAG	3 cut(s)	88, 161, 1101
SmoI	CTYRAG	3 cut(s)	88, 161, 1101
SpeI	ACTAGT	1 cut(s)	1913
SsiI	CCGC	6 cut(s)	29, 919, 1364, 2174, 2295, 2462
SspI	AATATT	1 cut(s)	1186
SspMI	CTAG	5 cut(s)	1328, 1385, 1914, 2129, 2171
SstI	GAGCTC	1 cut(s)	2652
StyD4I	CCNGG	7 cut(s)	460, 586, 826, 1398, 1879, 2380, 2841
StyI	CCWWGG	4 cut(s)	408, 1429, 1439, 2158
TaaI	ACNGT	6 cut(s)	886, 1084, 1490, 2120, 2185, 2684
TaiI	ACGT	2 cut(s)	63, 1336
TaqI	TCGA	9 cut(s)	519, 1102, 1116, 1849, 1918, 2019, 2084, 2265, 2817
TatI	WGTACW	3 cut(s)	1867, 1906, 2318
TauI	GCSGC	2 cut(s)	2297, 2465
TfiI	GAWTC	5 cut(s)	703, 1113, 1303, 1516, 2819
Tru1I	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2739
Tru9I	TTAA	9 cut(s)	480, 1019, 1062, 1503, 1533, 1782, 1800, 2058, 2739
TscAI	CASTG	9 cut(s)	51, 537, 601, 658, 1000, 1495, 2307, 2571, 2829
TseFI	GTSAC	6 cut(s)	95, 574, 895, 995, 1644, 2344
Tsp45I	GTSAC	6 cut(s)	95, 574, 895, 995, 1644, 2344
TspDTI	ATGAA	8 cut(s)	650, 1331, 1438, 1952, 1981, 2023, 2539, 2849
TspGWI	ACGGA	2 cut(s)	439, 1964
TspRI	CASTG	9 cut(s)	51, 537, 601, 658, 1000, 1495, 2307, 2571, 2829
Tth111I	GACNNNGTC	1 cut(s)	1581
VneI	GTGCAC	2 cut(s)	1196, 1284
XagI	CCTNNNNNAGG	1 cut(s)	2614
XapI	RAATTY	3 cut(s)	745, 864, 2231
XceI	RCATGY	3 cut(s)	618, 1606, 2816
XhoI	CTCGAG	1 cut(s)	1101
XmnI	GAANNNNTTC	1 cut(s)	1855
XspI	CTAG	5 cut(s)	1328, 1385, 1914, 2129, 2171
Zsp2I	ATGCAT	1 cut(s)	1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.