Rh7AG261300

Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate. The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
26744029 .. 26752210
8182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG261300.1

Sequence Viewer

Length: 1149 bp
ATGTATATCCTCTCTTCTGCTACGTTTTCGTCCACCACATTCTTCACGCCTAGGGTTTCTTCTTCTTCATTGCTCTCGTCGTCGTCGTCATTGTCGTCGTCGACTTCGAATTCGAAGCTGCGGCTGGTGCCTCTGCGATCGAGTCCGCGGCGGAGCTCCTCGGCCTGTCCTTGCTCGTTTTACTCGTCCTCGAAGGTCAGAGCTATGGCGGAGATGGTCAAGGACAAGGAGGAGGAGTCGTCTTTGTCGGCGGTTGAGAGCGCGCAGCGCCGGGAGACTAAGCATTCACGCACGTTTCTTAATGTCACCAGTGAAGAAGAGCTGCTGTCTGCAATCAGGATGGAAACAGAAGCTGGAAGGCTTCCCTCAAATGTTGCTTCAGGAATGGAGGAATTATATCATAATTACAAAAATGCTATTCTCCAAAGTGGAAATCCCAAGGCAGATGAAATTGTTCTGTCAAATATGACTGCTGCGTTAGATCGCATATTCTTGGATATAGAGGACCCATTTGTCTTCTCACCATATCACAAAGCACTGCGAGAGCCTTTTGACTACTACATGTTTGGACAAAATTATATTCGTCCTTTAGTTGATTTCAGAAATTCATATGTTGGTAATGTATCTGTTTTCTATGACATGGAACAGAAGCTTCGACAGGGTCACAACATTATTTTGATATCAAATCACCAAACTGAAGCAGATCCAGCTGTCATTGCCTTGTTGCTTGAAACAACAAACCCACATCTTGCTGAGAAAATGACCTACATAGCAGGAGATAGAGTTGTGACAGATCCTCTTTGCAAGCCCTTCAGCATCGGAAGGAATCTTATATGTGTTTACTCAAAAAAGCACATGAATGATGTTCCTGAGCTTGCTGAAATGAAAAGAAAAGCAAACACACGGAGTTTGAAGGAAATGGCTTTGCTATTAAGGGGTGGGTCACAAATTATATGGATTGCACCAAGTGGTGGAAGGGATCGGCCAGATCCTGTAACTGAAGAATGGTTCCCAGCACCTTTTGATGCTTCTGCACTGGACAATCTAAGAAGGCTTGCTGAACATTCTGCTGCTCCAGGGCATATATATCCCTTGGCATTATTGTGTCACAACATCATGCCTCCTCCACGCCAAGTATGTTTTCTCTGA

Protein Analysis

382

Amino Acids

42.78

Weight (kDa)

7.14

Isoelectric Point (pI)

71.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GPAT_N PF14829 96 - 171 1.9e-36 Glycerol-3-phosphate acyltransferase N-terminal
Acyltransferase PF01553 214 - 366 7.5e-15 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 512
AccB1I GGYRCC 1 cut(s) 127
AccB7I CCANNNNNTGG 1 cut(s) 971
AccI GTMKAC 1 cut(s) 101
AccII CGCG 2 cut(s) 148, 263
AciI CCGC 6 cut(s) 121, 146, 148, 151, 209, 251
AclWI GGATC 4 cut(s) 698, 788, 983, 987
AcoI YGGCCR 1 cut(s) 983
AcsI RAATTY 2 cut(s) 109, 604
AcuI CTGAAG 4 cut(s) 363, 717, 796, 1020
AdeI CACNNNGTG 1 cut(s) 968
AfiI CCNNNNNNNGG 1 cut(s) 971
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 2 cut(s) 731, 913
AjnI CCWGG 1 cut(s) 1075
AjuI GAANNNNNNNTTGG 1 cut(s) 1125
AluBI AGCT 8 cut(s) 118, 156, 203, 322, 353, 652, 710, 874
AluI AGCT 8 cut(s) 118, 156, 203, 322, 353, 652, 710, 874
Alw21I GWGCWC 1 cut(s) 158
Alw26I GTCTC 1 cut(s) 269
AlwI GGATC 4 cut(s) 698, 788, 983, 987
AlwNI CAGNNNCTG 2 cut(s) 353, 992
AoxI GGCC 2 cut(s) 162, 983
ApeKI GCWGC 5 cut(s) 118, 265, 322, 473, 1070
ApoI RAATTY 2 cut(s) 109, 604
ArsI GACNNNNNNTTYG 2 cut(s) 94, 126
Asp700I GAANNNNTTC 1 cut(s) 453
AspA2I CCTAGG 1 cut(s) 50
AspLEI GCGC 3 cut(s) 263, 265, 270
AspS9I GGNCC 1 cut(s) 505
AsuC2I CCSGG 1 cut(s) 272
AsuHPI GGTGA 3 cut(s) 298, 513, 680
AsuII TTCGAA 2 cut(s) 107, 113
AvaII GGWCC 1 cut(s) 505
AvrII CCTAGG 1 cut(s) 50
BanI GGYRCC 1 cut(s) 127
BanII GRGCYC 1 cut(s) 158
BbsI GAAGAC 1 cut(s) 508
Bbv12I GWGCWC 1 cut(s) 158
BbvI GCAGC 5 cut(s) 105, 277, 309, 460, 1057
BccI CCATC 2 cut(s) 208, 334
BciT130I CCWGG 1 cut(s) 1077
BcnI CCSGG 1 cut(s) 272
BcoDI GTCTC 1 cut(s) 269
BfaI CTAG 1 cut(s) 51
BfoI RGCGCY 1 cut(s) 271
BisI GCNGC 7 cut(s) 119, 122, 149, 266, 323, 474, 1071
BlnI CCTAGG 1 cut(s) 50
BlsI GCNGC 7 cut(s) 120, 123, 150, 267, 324, 475, 1072
Bme1390I CCNGG 2 cut(s) 272, 1077
Bme18I GGWCC 1 cut(s) 505
BmgT120I GGNCC 1 cut(s) 505
BmiI GGNNCC 3 cut(s) 129, 507, 1010
BmrFI CCNGG 2 cut(s) 272, 1077
BmsI GCATC 2 cut(s) 825, 1015
BpiI GAAGAC 1 cut(s) 508
BpmI CTGGAG 1 cut(s) 1059
Bpu10I CCTNAGC 1 cut(s) 870
Bpu14I TTCGAA 2 cut(s) 107, 113
BpuMI CCSGG 1 cut(s) 272
BsaJI CCNNGG 6 cut(s) 50, 146, 159, 438, 1076, 1092
BsaXI ACNNNNNCTCC 6 cut(s) 221, 224, 251, 254, 768, 798
Bsc4I CCNNNNNNNGG 1 cut(s) 971
Bse1I ACTGG 2 cut(s) 309, 1041
Bse3DI GCAATG 2 cut(s) 68, 714
BseBI CCWGG 1 cut(s) 1077
BseDI CCNNGG 6 cut(s) 50, 146, 159, 438, 1076, 1092
BseGI GGATG 1 cut(s) 345
BseLI CCNNNNNNNGG 1 cut(s) 971
BseMI GCAATG 2 cut(s) 68, 714
BseMII CTCAG 2 cut(s) 744, 861
BseNI ACTGG 2 cut(s) 309, 1041
BsePI GCGCGC 1 cut(s) 261
BseRI GAGGAG 4 cut(s) 148, 245, 248, 1113
BseXI GCAGC 5 cut(s) 105, 277, 309, 460, 1057
BseYI CCCAGC 1 cut(s) 1012
BsgI GTGCAG 1 cut(s) 1017
Bsh1236I CGCG 2 cut(s) 148, 263
Bsh1285I CGRYCG 1 cut(s) 140
BshFI GGCC 2 cut(s) 164, 985
BshNI GGYRCC 1 cut(s) 127
BsiEI CGRYCG 1 cut(s) 140
BsiHKAI GWGCWC 1 cut(s) 158
BsiSI CCGG 1 cut(s) 271
BslI CCNNNNNNNGG 1 cut(s) 971
BsmAI GTCTC 1 cut(s) 269
BsmI GAATGC 1 cut(s) 283
BsnI GGCC 2 cut(s) 164, 985
Bsp119I TTCGAA 2 cut(s) 107, 113
Bsp1286I GDGCHC 1 cut(s) 158
Bsp143I GATC 6 cut(s) 137, 481, 703, 793, 979, 988
BspACI CCGC 6 cut(s) 121, 146, 148, 151, 209, 251
BspANI GGCC 2 cut(s) 164, 985
BspCNI CTCAG 2 cut(s) 745, 862
BspFNI CGCG 2 cut(s) 148, 263
BspLI GGNNCC 3 cut(s) 129, 507, 1010
BspPI GGATC 4 cut(s) 698, 788, 983, 987
BspQI GCTCTTC 1 cut(s) 312
BspT104I TTCGAA 2 cut(s) 107, 113
BspT107I GGYRCC 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 68, 714
BsrI ACTGG 2 cut(s) 309, 1041
BssECI CCNNGG 6 cut(s) 50, 146, 159, 438, 1076, 1092
BssHII GCGCGC 1 cut(s) 261
BssMI GATC 6 cut(s) 137, 481, 703, 793, 979, 988
BssT1I CCWWGG 3 cut(s) 50, 438, 1092
Bst2UI CCWGG 1 cut(s) 1077
Bst6I CTCTTC 2 cut(s) 19, 312
BstBI TTCGAA 2 cut(s) 107, 113
BstC8I GCNNGC 4 cut(s) 263, 806, 876, 1056
BstDEI CTNAG 4 cut(s) 279, 753, 870, 1046
BstDSI CCRYGG 1 cut(s) 146
BstF5I GGATG 1 cut(s) 345
BstFNI CGCG 2 cut(s) 148, 263
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 3 cut(s) 263, 265, 270
BstKTI GATC 6 cut(s) 140, 484, 706, 796, 982, 991
BstMAI GTCTC 1 cut(s) 269
BstMBI GATC 6 cut(s) 137, 481, 703, 793, 979, 988
BstMCI CGRYCG 1 cut(s) 140
BstMWI GCNNNNNNNGC 4 cut(s) 127, 267, 707, 716
BstNI CCWGG 1 cut(s) 1077
BstNSI RCATGY 1 cut(s) 565
BstSCI CCNGG 2 cut(s) 270, 1075
BstUI CGCG 2 cut(s) 148, 263
BstV1I GCAGC 5 cut(s) 105, 277, 309, 460, 1057
BstV2I GAAGAC 1 cut(s) 508
BstX2I RGATCY 3 cut(s) 703, 793, 988
BstYI RGATCY 3 cut(s) 703, 793, 988
BsuRI GGCC 2 cut(s) 164, 985
BtgI CCRYGG 1 cut(s) 146
BtsCI GGATG 1 cut(s) 345
BtsI GCAGTG 1 cut(s) 536
BtsIMutI CAGTG 3 cut(s) 316, 536, 1034
Cac8I GCNNGC 4 cut(s) 263, 806, 876, 1056
CaiI CAGNNNCTG 2 cut(s) 353, 992
CfoI GCGC 3 cut(s) 263, 265, 270
Cfr13I GGNCC 1 cut(s) 505
Cfr42I CCGCGG 1 cut(s) 149
CviAII CATG 4 cut(s) 562, 640, 856, 1117
DdeI CTNAG 4 cut(s) 279, 753, 870, 1046
DpnI GATC 6 cut(s) 139, 483, 705, 795, 981, 990
DpnII GATC 6 cut(s) 137, 481, 703, 793, 979, 988
DraIII CACNNNGTG 1 cut(s) 968
DrdI GACNNNNNNGTC 1 cut(s) 512
DseDI GACNNNNNNGTC 1 cut(s) 512
EaeI YGGCCR 1 cut(s) 983
Eam1104I CTCTTC 2 cut(s) 19, 312
EarI CTCTTC 2 cut(s) 19, 312
EciI GGCGGA 2 cut(s) 166, 224
Ecl136II GAGCTC 1 cut(s) 156
Eco130I CCWWGG 3 cut(s) 50, 438, 1092
Eco24I GRGCYC 1 cut(s) 158
Eco32I GATATC 1 cut(s) 681
Eco47I GGWCC 1 cut(s) 505
Eco53kI GAGCTC 1 cut(s) 156
Eco57I CTGAAG 4 cut(s) 363, 717, 796, 1020
EcoICRI GAGCTC 1 cut(s) 156
EcoO109I RGGNCCY 1 cut(s) 505
EcoRI GAATTC 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 1075
EcoRV GATATC 1 cut(s) 681
EcoT14I CCWWGG 3 cut(s) 50, 438, 1092
EcoT38I GRGCYC 1 cut(s) 158
ErhI CCWWGG 3 cut(s) 50, 438, 1092
FaeI CATG 4 cut(s) 565, 643, 859, 1120
FatI CATG 4 cut(s) 561, 639, 855, 1116
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 1 cut(s) 101
Fnu4HI GCNGC 7 cut(s) 119, 122, 149, 266, 323, 474, 1071
FokI GGATG 1 cut(s) 352
FriOI GRGCYC 1 cut(s) 158
Fsp4HI GCNGC 7 cut(s) 119, 122, 149, 266, 323, 474, 1071
FspBI CTAG 1 cut(s) 51
GlaI GCGC 3 cut(s) 262, 264, 269
GluI GCNGC 7 cut(s) 119, 122, 149, 266, 323, 474, 1071
GsaI CCCAGC 1 cut(s) 1016
GsuI CTGGAG 1 cut(s) 1059
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 2 cut(s) 164, 985
HapII CCGG 1 cut(s) 271
HhaI GCGC 3 cut(s) 263, 265, 270
Hin1II CATG 4 cut(s) 565, 643, 859, 1120
Hin6I GCGC 3 cut(s) 261, 263, 268
HinP1I GCGC 3 cut(s) 261, 263, 268
HincII GTYRAC 1 cut(s) 102
HindII GTYRAC 1 cut(s) 102
HindIII AAGCTT 1 cut(s) 650
HinfI GANTC 3 cut(s) 142, 236, 826
HpaII CCGG 1 cut(s) 271
HphI GGTGA 3 cut(s) 298, 513, 680
Hpy166II GTNNAC 3 cut(s) 33, 102, 841
Hpy188I TCNGA 4 cut(s) 200, 602, 821, 1148
Hpy188III TCNNGA 3 cut(s) 337, 381, 869
Hpy8I GTNNAC 3 cut(s) 33, 102, 841
Hpy99I CGWCG 5 cut(s) 82, 85, 88, 100, 103
HpyAV CCTTC 7 cut(s) 187, 351, 816, 820, 907, 969, 1044
HpyCH4IV ACGT 2 cut(s) 23, 293
HpyCH4V TGCA 4 cut(s) 332, 804, 962, 1034
HpyF10VI GCNNNNNNNGC 4 cut(s) 127, 267, 707, 716
HpyF3I CTNAG 4 cut(s) 279, 753, 870, 1046
HpySE526I ACGT 2 cut(s) 23, 293
Hsp92II CATG 4 cut(s) 565, 643, 859, 1120
HspAI GCGC 3 cut(s) 261, 263, 268
KspI CCGCGG 1 cut(s) 149
Kzo9I GATC 6 cut(s) 137, 481, 703, 793, 979, 988
LguI GCTCTTC 1 cut(s) 312
LmnI GCTCC 3 cut(s) 153, 161, 1078
Lsp1109I GCAGC 5 cut(s) 105, 277, 309, 460, 1057
LweI GCATC 2 cut(s) 825, 1015
MaeI CTAG 1 cut(s) 51
MaeII ACGT 2 cut(s) 23, 293
MaeIII GTNAC 6 cut(s) 304, 662, 787, 942, 994, 1106
MalI GATC 6 cut(s) 139, 483, 705, 795, 981, 990
MboI GATC 6 cut(s) 137, 481, 703, 793, 979, 988
MboII GAAGA 9 cut(s) 6, 34, 51, 54, 57, 326, 329, 508, 1013
MflI RGATCY 3 cut(s) 703, 793, 988
MhlI GDGCHC 1 cut(s) 158
MluCI AATT 7 cut(s) 109, 392, 403, 450, 574, 604, 948
MlyI GAGTC 2 cut(s) 151, 245
MroXI GAANNNNTTC 1 cut(s) 453
MseI TTAA 2 cut(s) 300, 932
MslI CAYNNNNRTG 2 cut(s) 858, 1102
MspA1I CMGCKG 2 cut(s) 148, 710
MspI CCGG 1 cut(s) 271
MspR9I CCNGG 2 cut(s) 272, 1077
MteI GCGCNGCGC 1 cut(s) 266
Mva1269I GAATGC 1 cut(s) 283
MvaI CCWGG 1 cut(s) 1077
MvnI CGCG 2 cut(s) 148, 263
MwoI GCNNNNNNNGC 4 cut(s) 127, 267, 707, 716
NciI CCSGG 1 cut(s) 272
NdeI CATATG 1 cut(s) 610
NdeII GATC 6 cut(s) 137, 481, 703, 793, 979, 988
NlaIII CATG 4 cut(s) 565, 643, 859, 1120
NlaIV GGNNCC 3 cut(s) 129, 507, 1010
NmeAIII GCCGAG 1 cut(s) 140
NmuCI GTSAC 5 cut(s) 304, 662, 787, 942, 1106
NspI RCATGY 1 cut(s) 565
NspV TTCGAA 2 cut(s) 107, 113
PauI GCGCGC 1 cut(s) 261
PciI ACATGT 1 cut(s) 561
PciSI GCTCTTC 1 cut(s) 312
PcsI WCGNNNNNNNCGW 4 cut(s) 83, 92, 104, 182
PctI GAATGC 1 cut(s) 283
PdmI GAANNNNTTC 1 cut(s) 453
PfeI GAWTC 1 cut(s) 826
PflFI GACNNNGTC 1 cut(s) 660
PflMI CCANNNNNTGG 1 cut(s) 971
PkrI GCNGC 7 cut(s) 120, 123, 150, 267, 324, 475, 1072
Ple19I CGATCG 1 cut(s) 140
PleI GAGTC 2 cut(s) 150, 244
PpsI GAGTC 2 cut(s) 150, 244
PpuMI RGGWCCY 1 cut(s) 505
PscI ACATGT 1 cut(s) 561
Psp124BI GAGCTC 1 cut(s) 158
Psp5II RGGWCCY 1 cut(s) 505
Psp6I CCWGG 1 cut(s) 1075
PspFI CCCAGC 1 cut(s) 1012
PspGI CCWGG 1 cut(s) 1075
PspN4I GGNNCC 3 cut(s) 129, 507, 1010
PspPI GGNCC 1 cut(s) 505
PspPPI RGGWCCY 1 cut(s) 505
PstNI CAGNNNCTG 2 cut(s) 353, 992
PsuI RGATCY 3 cut(s) 703, 793, 988
PsyI GACNNNGTC 1 cut(s) 660
PteI GCGCGC 1 cut(s) 261
PvuI CGATCG 1 cut(s) 140
PvuII CAGCTG 1 cut(s) 710
RseI CAYNNNNRTG 2 cut(s) 858, 1102
SacI GAGCTC 1 cut(s) 158
SacII CCGCGG 1 cut(s) 149
SalI GTCGAC 1 cut(s) 100
SapI GCTCTTC 1 cut(s) 312
SaqAI TTAA 2 cut(s) 300, 932
SatI GCNGC 7 cut(s) 119, 122, 149, 266, 323, 474, 1071
Sau3AI GATC 6 cut(s) 137, 481, 703, 793, 979, 988
Sau96I GGNCC 1 cut(s) 505
SchI GAGTC 2 cut(s) 151, 245
ScrFI CCNGG 2 cut(s) 272, 1077
SduI GDGCHC 1 cut(s) 158
SfaNI GCATC 2 cut(s) 825, 1015
Sfr303I CCGCGG 1 cut(s) 149
SfuI TTCGAA 2 cut(s) 107, 113
SgrBI CCGCGG 1 cut(s) 149
SinI GGWCC 1 cut(s) 505
SmiMI CAYNNNNRTG 2 cut(s) 858, 1102
Sse9I AATT 7 cut(s) 109, 392, 403, 450, 574, 604, 948
SsiI CCGC 6 cut(s) 121, 146, 148, 151, 209, 251
SspMI CTAG 1 cut(s) 51
SstI GAGCTC 1 cut(s) 158
StyD4I CCNGG 2 cut(s) 270, 1075
StyI CCWWGG 3 cut(s) 50, 438, 1092
TaiI ACGT 2 cut(s) 26, 296
TaqI TCGA 6 cut(s) 101, 107, 113, 140, 191, 655
TasI AATT 7 cut(s) 109, 392, 403, 450, 574, 604, 948
TauI GCSGC 2 cut(s) 124, 151
TfiI GAWTC 1 cut(s) 826
Tru1I TTAA 2 cut(s) 300, 932
Tru9I TTAA 2 cut(s) 300, 932
TscAI CASTG 3 cut(s) 316, 543, 1041
TseFI GTSAC 5 cut(s) 304, 662, 787, 942, 1106
TseI GCWGC 5 cut(s) 118, 265, 322, 473, 1070
Tsp45I GTSAC 5 cut(s) 304, 662, 787, 942, 1106
TspDTI ATGAA 5 cut(s) 57, 462, 597, 872, 899
TspGWI ACGGA 1 cut(s) 919
TspRI CASTG 3 cut(s) 316, 543, 1041
Tth111I GACNNNGTC 1 cut(s) 660
Van91I CCANNNNNTGG 1 cut(s) 971
VpaK11BI GGWCC 1 cut(s) 505
XapI RAATTY 2 cut(s) 109, 604
XceI RCATGY 1 cut(s) 565
XmaJI CCTAGG 1 cut(s) 50
XmiI GTMKAC 1 cut(s) 101
XmnI GAANNNNTTC 1 cut(s) 453
XspI CTAG 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.