Rh7AG398400

Anthocyanidin 5,3-O-glucosyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
52314741 .. 52315483
743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG398400.1

Sequence Viewer

Length: 210 bp
ATGGAGTTCCATCTGGAGTTGATGGAGTCGGAAAATGGAAGAGAGCTTAGAGAGAGGAGTTTGAAAATTGGGAAGATGGCTTTGGGTGCTCTGGGAGAGCGTGGTTCCTCCAGAAGAGCTCTGGCCAATTTTATGAAGAAAGACATTGAAGCTATAGAAGATTTATGGGAAATTTTAGTCGAGTCAGAGCTGCGCGACGCCATGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

69

Amino Acids

7.91

Weight (kDa)

4.98

Isoelectric Point (pI)

66.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 195
AcoI YGGCCR 1 cut(s) 123
AcsI RAATTY 1 cut(s) 171
AcyI GRCGYC 1 cut(s) 198
AgsI TTSAA 2 cut(s) 64, 149
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
AluBI AGCT 4 cut(s) 46, 119, 152, 190
AluI AGCT 4 cut(s) 46, 119, 152, 190
Alw21I GWGCWC 2 cut(s) 91, 121
AoxI GGCC 1 cut(s) 123
ApeKI GCWGC 1 cut(s) 190
ApoI RAATTY 1 cut(s) 171
AspLEI GCGC 1 cut(s) 195
BalI TGGCCA 1 cut(s) 125
BanII GRGCYC 1 cut(s) 121
Bbv12I GWGCWC 2 cut(s) 91, 121
BbvI GCAGC 1 cut(s) 177
BccI CCATC 3 cut(s) 16, 18, 70
BfmI CTRYAG 1 cut(s) 153
BisI GCNGC 1 cut(s) 191
BlsI GCNGC 1 cut(s) 192
BmiI GGNNCC 1 cut(s) 106
BpmI CTGGAG 2 cut(s) 35, 94
BsaHI GRCGYC 1 cut(s) 198
BsaJI CCNNGG 1 cut(s) 201
BseDI CCNNGG 1 cut(s) 201
BseRI GAGGAG 1 cut(s) 70
BseXI GCAGC 1 cut(s) 177
Bsh1236I CGCG 1 cut(s) 195
BshFI GGCC 1 cut(s) 125
BsiHKAI GWGCWC 2 cut(s) 91, 121
BsnI GGCC 1 cut(s) 125
Bsp1286I GDGCHC 2 cut(s) 91, 121
Bsp19I CCATGG 1 cut(s) 201
BspANI GGCC 1 cut(s) 125
BspFNI CGCG 1 cut(s) 195
BspLI GGNNCC 1 cut(s) 106
BspQI GCTCTTC 1 cut(s) 109
BssECI CCNNGG 1 cut(s) 201
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 1 cut(s) 201
Bst6I CTCTTC 2 cut(s) 34, 109
BstACI GRCGYC 1 cut(s) 198
BstDEI CTNAG 1 cut(s) 47
BstDSI CCRYGG 1 cut(s) 201
BstFNI CGCG 1 cut(s) 195
BstHHI GCGC 1 cut(s) 195
BstMWI GCNNNNNNNGC 1 cut(s) 86
BstSFI CTRYAG 1 cut(s) 153
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 1 cut(s) 177
BsuRI GGCC 1 cut(s) 125
BtgI CCRYGG 1 cut(s) 201
CfoI GCGC 1 cut(s) 195
CviAII CATG 1 cut(s) 202
CviJI RGCY 6 cut(s) 46, 80, 119, 125, 152, 190
CviKI_1 RGCY 6 cut(s) 46, 80, 119, 125, 152, 190
DdeI CTNAG 1 cut(s) 47
EaeI YGGCCR 1 cut(s) 123
Eam1104I CTCTTC 2 cut(s) 34, 109
EarI CTCTTC 2 cut(s) 34, 109
Ecl136II GAGCTC 1 cut(s) 119
Eco130I CCWWGG 1 cut(s) 201
Eco24I GRGCYC 1 cut(s) 121
Eco53kI GAGCTC 1 cut(s) 119
EcoICRI GAGCTC 1 cut(s) 119
EcoT14I CCWWGG 1 cut(s) 201
EcoT38I GRGCYC 1 cut(s) 121
ErhI CCWWGG 1 cut(s) 201
FaeI CATG 1 cut(s) 205
FaiI YATR 4 cut(s) 134, 155, 166, 203
FatI CATG 1 cut(s) 201
Fnu4HI GCNGC 1 cut(s) 191
FriOI GRGCYC 1 cut(s) 121
Fsp4HI GCNGC 1 cut(s) 191
GlaI GCGC 1 cut(s) 194
GluI GCNGC 1 cut(s) 191
GsuI CTGGAG 2 cut(s) 35, 94
HaeIII GGCC 1 cut(s) 125
HhaI GCGC 1 cut(s) 195
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 1 cut(s) 205
Hin6I GCGC 1 cut(s) 193
HinP1I GCGC 1 cut(s) 193
HinfI GANTC 2 cut(s) 26, 182
Hpy188I TCNGA 2 cut(s) 31, 187
Hpy188III TCNNGA 2 cut(s) 14, 111
Hpy99I CGWCG 1 cut(s) 200
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
HpyF3I CTNAG 1 cut(s) 47
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 1 cut(s) 205
HspAI GCGC 1 cut(s) 193
LguI GCTCTTC 1 cut(s) 109
LpnPI CCDG 3 cut(s) 77, 107, 124
Lsp1109I GCAGC 1 cut(s) 177
MboII GAAGA 5 cut(s) 51, 85, 126, 148, 170
MhlI GDGCHC 2 cut(s) 91, 121
MlsI TGGCCA 1 cut(s) 125
MluCI AATT 3 cut(s) 66, 127, 171
MluNI TGGCCA 1 cut(s) 125
MlyI GAGTC 2 cut(s) 35, 191
MmeI TCCRAC 1 cut(s) 9
MnlI CCTC 2 cut(s) 48, 118
Mox20I TGGCCA 1 cut(s) 125
MscI TGGCCA 1 cut(s) 125
Msp20I TGGCCA 1 cut(s) 125
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 1 cut(s) 86
NcoI CCATGG 1 cut(s) 201
NlaIII CATG 1 cut(s) 205
NlaIV GGNNCC 1 cut(s) 106
PciSI GCTCTTC 1 cut(s) 109
PkrI GCNGC 1 cut(s) 192
PleI GAGTC 2 cut(s) 34, 190
PpsI GAGTC 2 cut(s) 34, 190
Psp124BI GAGCTC 1 cut(s) 121
PspN4I GGNNCC 1 cut(s) 106
SacI GAGCTC 1 cut(s) 121
SapI GCTCTTC 1 cut(s) 109
SatI GCNGC 1 cut(s) 191
SchI GAGTC 2 cut(s) 35, 191
SduI GDGCHC 2 cut(s) 91, 121
SetI ASST 4 cut(s) 48, 121, 154, 192
SfcI CTRYAG 1 cut(s) 153
SgeI CNNG 7 cut(s) 26, 104, 113, 123, 134, 193, 206
Sse9I AATT 3 cut(s) 66, 127, 171
SstI GAGCTC 1 cut(s) 121
StyI CCWWGG 1 cut(s) 201
TaqI TCGA 1 cut(s) 180
TasI AATT 3 cut(s) 66, 127, 171
TseI GCWGC 1 cut(s) 190
TspDTI ATGAA 1 cut(s) 149
XapI RAATTY 1 cut(s) 171
XcmI CCANNNNNNNNNTGG 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.