Rh7BG476100

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
56079065 .. 56079477
413 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG476100.1

Sequence Viewer

Length: 324 bp
ATGGAAGCAAATTTACATGAAATTGGCCTTGGATTTGTAAACAACAATCATTTTGTTCAGGCATGTTTATTGTCTGGACACCCATTGCCACCGGTTACACCAAATTGGATCTATCATGCTGATGATAAAGCTAAAAGTTTGTACTTGAAGTATCAAGACCGTTTTCAGCAGTATGATCGATTGCCACATCCTGAAAGAGTGACTAATATATCCTCAGAAGTAGTGCAACTTGACGACGACAATGTACTTGCCGATGAAATTGTTCAACTTGGTGATGTCACTATGTCTAGCGAAGAAGAAACAATACATGTTGGTGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

12.16

Weight (kDa)

4.5

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020054)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 116
AcsI RAATTY 1 cut(s) 10
AfaI GTAC 2 cut(s) 143, 246
AflIII ACRYGT 1 cut(s) 307
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 2 cut(s) 148, 266
AjuI GAANNNNNNNTTGG 2 cut(s) 12, 44
AluBI AGCT 1 cut(s) 131
AluI AGCT 1 cut(s) 131
AlwI GGATC 1 cut(s) 116
AoxI GGCC 1 cut(s) 25
ApoI RAATTY 1 cut(s) 10
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 261
AsuHPI GGTGA 1 cut(s) 284
BarI GAAGNNNNNNTAC 3 cut(s) 29, 288, 320
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BfaI CTAG 1 cut(s) 288
Bsa29I ATCGAT 1 cut(s) 178
BsaJI CCNNGG 1 cut(s) 28
BsaWI WCCGGW 1 cut(s) 91
Bse118I RCCGGY 1 cut(s) 91
Bse3DI GCAATG 1 cut(s) 83
BseCI ATCGAT 1 cut(s) 178
BseDI CCNNGG 1 cut(s) 28
BseGI GGATG 1 cut(s) 187
BseMI GCAATG 1 cut(s) 83
BseMII CTCAG 1 cut(s) 228
BshFI GGCC 1 cut(s) 27
BshTI ACCGGT 1 cut(s) 91
BshVI ATCGAT 1 cut(s) 178
BsiSI CCGG 1 cut(s) 92
BsnI GGCC 1 cut(s) 27
Bsp143I GATC 2 cut(s) 108, 175
BspANI GGCC 1 cut(s) 27
BspCNI CTCAG 1 cut(s) 227
BspDI ATCGAT 1 cut(s) 178
BspPI GGATC 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 83
BsrFI RCCGGY 1 cut(s) 91
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 1 cut(s) 28
BssMI GATC 2 cut(s) 108, 175
BssT1I CCWWGG 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 161
BstDEI CTNAG 1 cut(s) 214
BstF5I GGATG 1 cut(s) 187
BstKTI GATC 2 cut(s) 111, 178
BstMBI GATC 2 cut(s) 108, 175
BstNSI RCATGY 2 cut(s) 66, 311
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
Bsu15I ATCGAT 1 cut(s) 178
BsuRI GGCC 1 cut(s) 27
BsuTUI ATCGAT 1 cut(s) 178
BtsCI GGATG 1 cut(s) 187
Cfr10I RCCGGY 1 cut(s) 91
ClaI ATCGAT 1 cut(s) 178
Csp6I GTAC 2 cut(s) 142, 245
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 4 cut(s) 17, 63, 116, 308
CviJI RGCY 2 cut(s) 27, 131
CviKI_1 RGCY 2 cut(s) 27, 131
CviQI GTAC 2 cut(s) 142, 245
DdeI CTNAG 1 cut(s) 214
DpnI GATC 2 cut(s) 110, 177
DpnII GATC 2 cut(s) 108, 175
Eco130I CCWWGG 1 cut(s) 28
EcoT14I CCWWGG 1 cut(s) 28
ErhI CCWWGG 1 cut(s) 28
FaeI CATG 4 cut(s) 20, 66, 119, 311
FaiI YATR 7 cut(s) 18, 64, 117, 174, 209, 284, 309
FatI CATG 4 cut(s) 16, 62, 115, 307
FokI GGATG 1 cut(s) 174
FspBI CTAG 1 cut(s) 288
HaeIII GGCC 1 cut(s) 27
HapII CCGG 1 cut(s) 92
Hin1II CATG 4 cut(s) 20, 66, 119, 311
HpaII CCGG 1 cut(s) 92
HphI GGTGA 1 cut(s) 284
Hpy166II GTNNAC 1 cut(s) 40
Hpy188I TCNGA 1 cut(s) 217
Hpy188III TCNNGA 3 cut(s) 75, 155, 191
Hpy8I GTNNAC 1 cut(s) 40
Hpy99I CGWCG 1 cut(s) 239
HpyCH4III ACNGT 1 cut(s) 161
HpyCH4V TGCA 1 cut(s) 226
HpyF3I CTNAG 1 cut(s) 214
Hsp92II CATG 4 cut(s) 20, 66, 119, 311
Kzo9I GATC 2 cut(s) 108, 175
LpnPI CCDG 4 cut(s) 44, 60, 105, 204
MaeI CTAG 1 cut(s) 288
MaeIII GTNAC 3 cut(s) 94, 199, 277
MalI GATC 2 cut(s) 110, 177
MboI GATC 2 cut(s) 108, 175
MboII GAAGA 2 cut(s) 305, 308
MflI RGATCY 1 cut(s) 108
MluCI AATT 4 cut(s) 10, 21, 103, 258
MnlI CCTC 1 cut(s) 223
MroXI GAANNNNTTC 1 cut(s) 261
MslI CAYNNNNRTG 2 cut(s) 120, 312
MspI CCGG 1 cut(s) 92
NdeII GATC 2 cut(s) 108, 175
NlaIII CATG 4 cut(s) 20, 66, 119, 311
NmuCI GTSAC 2 cut(s) 199, 277
NspI RCATGY 2 cut(s) 66, 311
PciI ACATGT 1 cut(s) 307
PdmI GAANNNNTTC 1 cut(s) 261
PinAI ACCGGT 1 cut(s) 91
PscI ACATGT 1 cut(s) 307
PsuI RGATCY 1 cut(s) 108
RsaI GTAC 2 cut(s) 143, 246
RsaNI GTAC 2 cut(s) 142, 245
RseI CAYNNNNRTG 2 cut(s) 120, 312
Sau3AI GATC 2 cut(s) 108, 175
SetI ASST 1 cut(s) 133
SmiMI CAYNNNNRTG 2 cut(s) 120, 312
Sse9I AATT 4 cut(s) 10, 21, 103, 258
SspMI CTAG 1 cut(s) 288
StyI CCWWGG 1 cut(s) 28
TaaI ACNGT 1 cut(s) 161
TaqI TCGA 1 cut(s) 178
TasI AATT 4 cut(s) 10, 21, 103, 258
TatI WGTACW 2 cut(s) 141, 244
TseFI GTSAC 2 cut(s) 199, 277
Tsp45I GTSAC 2 cut(s) 199, 277
TspDTI ATGAA 2 cut(s) 33, 270
XapI RAATTY 1 cut(s) 10
XceI RCATGY 2 cut(s) 66, 311
XmnI GAANNNNTTC 1 cut(s) 261
XspI CTAG 1 cut(s) 288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.