Rh7CG071200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
5076082 .. 5076381
300 bp
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UTR
Exon/CDS
Intron
Rh7CG071200.1

Sequence Viewer

Length: 300 bp
ATGGCCACCACTTTTGCGAGAGCACAAGATGTCCCTCCATTCTCTCCCCTTTTAGAAAGAGAGAAACCACCCTTCTTGAAAAAGATGAGAAATTCAGTTGTCGTTACTTTTCAAGTTATTTCAAAAAAGAGGGTTGGTGTTGGTAGTCGGGCTCGGGCTGGTGAGGATGAAAATGACATCCGATATGGGTCAGGTTTTGTGTTTAGTAGTGAAGGTCATATTTTGACTTGGGGGATAACATTAAAGGAAACAAGAGCTCAAAGATACAGGTTCAATTTTTTCAGCAAAATGAACCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

99

Amino Acids

11.39

Weight (kDa)

10.69

Isoelectric Point (pI)

38.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019034)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 91
AgsI TTSAA 4 cut(s) 79, 113, 123, 274
AluBI AGCT 1 cut(s) 257
AluI AGCT 1 cut(s) 257
Alw21I GWGCWC 2 cut(s) 25, 259
Ama87I CYCGRG 1 cut(s) 153
AoxI GGCC 1 cut(s) 3
ApoI RAATTY 1 cut(s) 91
AsuHPI GGTGA 1 cut(s) 173
AvaI CYCGRG 1 cut(s) 153
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 154, 259
Bbv12I GWGCWC 2 cut(s) 25, 259
BmeT110I CYCGRG 1 cut(s) 153
BseGI GGATG 2 cut(s) 172, 177
BshFI GGCC 1 cut(s) 5
BsiHKAI GWGCWC 2 cut(s) 25, 259
BsiHKCI CYCGRG 1 cut(s) 153
BslFI GGGAC 1 cut(s) 17
BsmFI GGGAC 1 cut(s) 17
BsnI GGCC 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 153
Bsp1286I GDGCHC 3 cut(s) 25, 154, 259
BspANI GGCC 1 cut(s) 5
BstF5I GGATG 2 cut(s) 172, 177
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 2 cut(s) 172, 177
CspCI CAANNNNNGTGG 3 cut(s) 30, 57, 92
CviJI RGCY 4 cut(s) 5, 152, 158, 257
CviKI_1 RGCY 4 cut(s) 5, 152, 158, 257
EaeI YGGCCR 1 cut(s) 3
Ecl136II GAGCTC 1 cut(s) 257
Eco24I GRGCYC 2 cut(s) 154, 259
Eco53kI GAGCTC 1 cut(s) 257
Eco88I CYCGRG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 257
EcoT38I GRGCYC 2 cut(s) 154, 259
FaiI YATR 2 cut(s) 186, 219
FaqI GGGAC 1 cut(s) 17
FokI GGATG 2 cut(s) 164, 179
FriOI GRGCYC 2 cut(s) 154, 259
HaeIII GGCC 1 cut(s) 5
HphI GGTGA 1 cut(s) 173
Hpy188I TCNGA 1 cut(s) 182
Hpy188III TCNNGA 1 cut(s) 76
HpyAV CCTTC 2 cut(s) 82, 206
LpnPI CCDG 3 cut(s) 144, 177, 253
MaeIII GTNAC 1 cut(s) 103
MhlI GDGCHC 3 cut(s) 25, 154, 259
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 91, 274
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 3 cut(s) 45, 123, 157
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 242
Msp20I TGGCCA 1 cut(s) 5
Psp124BI GAGCTC 1 cut(s) 259
SacI GAGCTC 1 cut(s) 259
SaqAI TTAA 1 cut(s) 242
SduI GDGCHC 3 cut(s) 25, 154, 259
SetI ASST 4 cut(s) 196, 217, 259, 272
Sse9I AATT 2 cut(s) 91, 274
SstI GAGCTC 1 cut(s) 259
TasI AATT 2 cut(s) 91, 274
Tru1I TTAA 1 cut(s) 242
Tru9I TTAA 1 cut(s) 242
TspDTI ATGAA 1 cut(s) 183
XapI RAATTY 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.