Rh7CG071300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
5076498 .. 5076827
330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG071300.1

Sequence Viewer

Length: 330 bp
ATGGAAGTGTATTGCATAGGACACCCTCTTGGGCTGACCTACGATATGCTTATAGGTCAAGTGGGTTTTACTGGTGCTAGGCAGTACGGCGAGTTTGTGGAATTAGATAATAACAGACTTTTGAGGGGCAAAGCAGGATTGGATGACAAGCTGGCCCTAATTCAATTGAATAACATTCATGGCAGTGATGCTATAGAAGGGGCACCAGTTTTCGATGCAAGTGGGAGAGTCCTTGGAATGCTAGCTTTTTGTCTTACGGTGTTCGACTTTGCTATTCATCACAAGGAATTAAAGGCAGTCATTGGAGAATTCAAAGGCAACAAAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

109

Amino Acids

11.85

Weight (kDa)

5.72

Isoelectric Point (pI)

20.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019034)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 202
AcsI RAATTY 1 cut(s) 308
AfaI GTAC 1 cut(s) 86
AgsI TTSAA 3 cut(s) 164, 169, 313
AluBI AGCT 2 cut(s) 151, 245
AluI AGCT 2 cut(s) 151, 245
AoxI GGCC 1 cut(s) 153
ApoI RAATTY 1 cut(s) 308
AspS9I GGNCC 1 cut(s) 154
AsuNHI GCTAGC 1 cut(s) 241
BaeGI GKGCMC 1 cut(s) 205
BanI GGYRCC 1 cut(s) 202
BceAI ACGGC 1 cut(s) 103
BfaI CTAG 2 cut(s) 78, 242
BfmI CTRYAG 1 cut(s) 192
BmgT120I GGNCC 1 cut(s) 154
BmiI GGNNCC 1 cut(s) 204
BmsI GCATC 2 cut(s) 178, 205
BmtI GCTAGC 1 cut(s) 245
BsaJI CCNNGG 1 cut(s) 232
Bse1I ACTGG 2 cut(s) 76, 206
BseDI CCNNGG 1 cut(s) 232
BseGI GGATG 1 cut(s) 148
BseNI ACTGG 2 cut(s) 76, 206
BseSI GKGCMC 1 cut(s) 205
BshFI GGCC 1 cut(s) 155
BshNI GGYRCC 1 cut(s) 202
BsmI GAATGC 1 cut(s) 243
BsnI GGCC 1 cut(s) 155
Bsp1286I GDGCHC 1 cut(s) 205
BspANI GGCC 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 204
BspOI GCTAGC 1 cut(s) 245
BspT107I GGYRCC 1 cut(s) 202
BsrI ACTGG 2 cut(s) 76, 206
BssECI CCNNGG 1 cut(s) 232
BssT1I CCWWGG 1 cut(s) 232
Bst4CI ACNGT 1 cut(s) 259
BstC8I GCNNGC 2 cut(s) 153, 243
BstF5I GGATG 1 cut(s) 148
BstSFI CTRYAG 1 cut(s) 192
BstSLI GKGCMC 1 cut(s) 205
BsuRI GGCC 1 cut(s) 155
BtsCI GGATG 1 cut(s) 148
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 1 cut(s) 190
Cac8I GCNNGC 2 cut(s) 153, 243
Cfr13I GGNCC 1 cut(s) 154
Csp6I GTAC 1 cut(s) 85
CviAII CATG 1 cut(s) 179
CviJI RGCY 4 cut(s) 34, 151, 155, 245
CviKI_1 RGCY 4 cut(s) 34, 151, 155, 245
CviQI GTAC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 232
EcoRI GAATTC 1 cut(s) 308
EcoT14I CCWWGG 1 cut(s) 232
ErhI CCWWGG 1 cut(s) 232
FaeI CATG 1 cut(s) 182
FaiI YATR 5 cut(s) 17, 47, 53, 180, 194
FatI CATG 1 cut(s) 178
FokI GGATG 1 cut(s) 155
FspBI CTAG 2 cut(s) 78, 242
HaeIII GGCC 1 cut(s) 155
Hin1II CATG 1 cut(s) 182
HinfI GANTC 1 cut(s) 228
HpyAV CCTTC 1 cut(s) 191
HpyCH4III ACNGT 1 cut(s) 259
HpyCH4V TGCA 2 cut(s) 15, 218
Hsp92II CATG 1 cut(s) 182
LpnPI CCDG 4 cut(s) 57, 120, 137, 219
LweI GCATC 2 cut(s) 178, 205
MaeI CTAG 2 cut(s) 78, 242
MfeI CAATTG 1 cut(s) 164
MhlI GDGCHC 1 cut(s) 205
MluCI AATT 5 cut(s) 101, 159, 164, 287, 308
MlyI GAGTC 1 cut(s) 237
MnlI CCTC 2 cut(s) 36, 117
MseI TTAA 1 cut(s) 290
MslI CAYNNNNRTG 1 cut(s) 183
MunI CAATTG 1 cut(s) 164
Mva1269I GAATGC 1 cut(s) 243
NheI GCTAGC 1 cut(s) 241
NlaIII CATG 1 cut(s) 182
NlaIV GGNNCC 1 cut(s) 204
PctI GAATGC 1 cut(s) 243
PleI GAGTC 1 cut(s) 236
PpsI GAGTC 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 204
PspPI GGNCC 1 cut(s) 154
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
RseI CAYNNNNRTG 1 cut(s) 183
SaqAI TTAA 1 cut(s) 290
Sau96I GGNCC 1 cut(s) 154
SchI GAGTC 1 cut(s) 237
SduI GDGCHC 1 cut(s) 205
SetI ASST 4 cut(s) 41, 58, 153, 247
SfaNI GCATC 2 cut(s) 178, 205
SfcI CTRYAG 1 cut(s) 192
SmiMI CAYNNNNRTG 1 cut(s) 183
Sse9I AATT 5 cut(s) 101, 159, 164, 287, 308
SspMI CTAG 2 cut(s) 78, 242
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 1 cut(s) 259
TaqI TCGA 2 cut(s) 213, 264
TasI AATT 5 cut(s) 101, 159, 164, 287, 308
Tru1I TTAA 1 cut(s) 290
Tru9I TTAA 1 cut(s) 290
TscAI CASTG 1 cut(s) 190
TspDTI ATGAA 2 cut(s) 167, 266
TspRI CASTG 1 cut(s) 190
XapI RAATTY 1 cut(s) 308
XspI CTAG 2 cut(s) 78, 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.