Novel plant snare
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35190 |
| fragaria_vesca | FvH4_5g20760 FvH4_5g20760 |
| malus_domestica | MD04G1053700.v1.1 MD11G1036500.v1.1 |
| prunus_persica | Prupe.5G052300_v2.0.a1 Prupe.5G052300_v2.0.a1 |
| pyrus_communis | pycom04g04680 pycom11g03010 |
| rosa_chinensis | RchiOBHm_Chr7g0206541 |
| rosa_laevigata | RLG00000003304 |
| rosa_multiflora | Rmu_sc0005065.1_g000056 |
| rosa_roxburghii | Rroxscaffold_3G00251420 |
| rosa_rugosa | Rorug07G0098300 Rorug07G0098400 |
| rosa_samantha | Rh7AG229800 Rh7CG244700 |
| rosa_wichuraiana | Rw7G019810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 406 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 229 |
| AclWI | GGATC | 2 cut(s) | 11, 138 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 229 |
| AgsI | TTSAA | 3 cut(s) | 73, 91, 116 |
| AjnI | CCWGG | 1 cut(s) | 529 |
| AluBI | AGCT | 3 cut(s) | 149, 355, 394 |
| AluI | AGCT | 3 cut(s) | 149, 355, 394 |
| Alw21I | GWGCWC | 1 cut(s) | 262 |
| Alw26I | GTCTC | 3 cut(s) | 230, 272, 293 |
| AlwI | GGATC | 2 cut(s) | 11, 138 |
| Ama87I | CYCGRG | 1 cut(s) | 184 |
| ApeKI | GCWGC | 1 cut(s) | 305 |
| AsuHPI | GGTGA | 1 cut(s) | 409 |
| AvaI | CYCGRG | 1 cut(s) | 184 |
| Bbv12I | GWGCWC | 1 cut(s) | 262 |
| BbvI | GCAGC | 1 cut(s) | 317 |
| BccI | CCATC | 3 cut(s) | 223, 257, 485 |
| BciT130I | CCWGG | 1 cut(s) | 531 |
| BclI | TGATCA | 2 cut(s) | 60, 241 |
| BcoDI | GTCTC | 3 cut(s) | 230, 272, 293 |
| BfuAI | ACCTGC | 1 cut(s) | 406 |
| BisI | GCNGC | 1 cut(s) | 306 |
| BlsI | GCNGC | 1 cut(s) | 307 |
| Bme1390I | CCNGG | 1 cut(s) | 531 |
| BmeT110I | CYCGRG | 1 cut(s) | 184 |
| BmrFI | CCNGG | 1 cut(s) | 531 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 59, 91, 344, 376 |
| BpuEI | CTTGAG | 1 cut(s) | 299 |
| Bsa29I | ATCGAT | 1 cut(s) | 252 |
| BsaJI | CCNNGG | 2 cut(s) | 183, 530 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 229 |
| BseBI | CCWGG | 1 cut(s) | 531 |
| BseCI | ATCGAT | 1 cut(s) | 252 |
| BseDI | CCNNGG | 2 cut(s) | 183, 530 |
| BseGI | GGATG | 2 cut(s) | 238, 499 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 229 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| BseXI | GCAGC | 1 cut(s) | 317 |
| BshVI | ATCGAT | 1 cut(s) | 252 |
| BsiHKAI | GWGCWC | 1 cut(s) | 262 |
| BsiHKCI | CYCGRG | 1 cut(s) | 184 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 229 |
| BsmAI | GTCTC | 3 cut(s) | 230, 272, 293 |
| BsmI | GAATGC | 1 cut(s) | 39 |
| BsoBI | CYCGRG | 1 cut(s) | 184 |
| Bsp1286I | GDGCHC | 1 cut(s) | 262 |
| Bsp143I | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspDI | ATCGAT | 1 cut(s) | 252 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BspMI | ACCTGC | 1 cut(s) | 406 |
| BspPI | GGATC | 2 cut(s) | 11, 138 |
| BssECI | CCNNGG | 2 cut(s) | 183, 530 |
| BssMI | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| Bst2UI | CCWGG | 1 cut(s) | 531 |
| Bst4CI | ACNGT | 1 cut(s) | 567 |
| BstC8I | GCNNGC | 2 cut(s) | 180, 537 |
| BstDEI | CTNAG | 1 cut(s) | 38 |
| BstF5I | GGATG | 2 cut(s) | 238, 499 |
| BstKTI | GATC | 5 cut(s) | 19, 63, 133, 244, 495 |
| BstMAI | GTCTC | 3 cut(s) | 230, 272, 293 |
| BstMBI | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 545 |
| BstNI | CCWGG | 1 cut(s) | 531 |
| BstSCI | CCNGG | 1 cut(s) | 529 |
| BstV1I | GCAGC | 1 cut(s) | 317 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| Bsu15I | ATCGAT | 1 cut(s) | 252 |
| BsuTUI | ATCGAT | 1 cut(s) | 252 |
| BtgZI | GCGATG | 1 cut(s) | 563 |
| BtsCI | GGATG | 2 cut(s) | 238, 499 |
| BveI | ACCTGC | 1 cut(s) | 406 |
| Cac8I | GCNNGC | 2 cut(s) | 180, 537 |
| CciI | TCATGA | 1 cut(s) | 274 |
| ClaI | ATCGAT | 1 cut(s) | 252 |
| CviAII | CATG | 1 cut(s) | 275 |
| CviJI | RGCY | 9 cut(s) | 86, 149, 248, 320, 355, 386, 394, 476, 535 |
| CviKI_1 | RGCY | 9 cut(s) | 86, 149, 248, 320, 355, 386, 394, 476, 535 |
| DdeI | CTNAG | 1 cut(s) | 38 |
| DpnI | GATC | 5 cut(s) | 18, 62, 132, 243, 494 |
| DpnII | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| Eco88I | CYCGRG | 1 cut(s) | 184 |
| EcoRII | CCWGG | 1 cut(s) | 529 |
| FaeI | CATG | 1 cut(s) | 278 |
| FaiI | YATR | 7 cut(s) | 79, 81, 102, 191, 276, 440, 473 |
| FatI | CATG | 1 cut(s) | 274 |
| FauNDI | CATATG | 1 cut(s) | 79 |
| FbaI | TGATCA | 2 cut(s) | 60, 241 |
| Fnu4HI | GCNGC | 1 cut(s) | 306 |
| FokI | GGATG | 2 cut(s) | 245, 486 |
| Fsp4HI | GCNGC | 1 cut(s) | 306 |
| GluI | GCNGC | 1 cut(s) | 306 |
| Hin1II | CATG | 1 cut(s) | 278 |
| HincII | GTYRAC | 1 cut(s) | 349 |
| HindII | GTYRAC | 1 cut(s) | 349 |
| HinfI | GANTC | 3 cut(s) | 359, 468, 571 |
| HpaI | GTTAAC | 1 cut(s) | 349 |
| HphI | GGTGA | 1 cut(s) | 409 |
| Hpy166II | GTNNAC | 1 cut(s) | 349 |
| Hpy188I | TCNGA | 1 cut(s) | 504 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 113, 275, 379, 521 |
| Hpy8I | GTNNAC | 1 cut(s) | 349 |
| HpyAV | CCTTC | 2 cut(s) | 376, 394 |
| HpyCH4III | ACNGT | 1 cut(s) | 567 |
| HpyCH4V | TGCA | 3 cut(s) | 104, 143, 422 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 545 |
| HpyF3I | CTNAG | 1 cut(s) | 38 |
| Hsp92II | CATG | 1 cut(s) | 278 |
| Ksp22I | TGATCA | 2 cut(s) | 60, 241 |
| KspAI | GTTAAC | 1 cut(s) | 349 |
| Kzo9I | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| LpnPI | CCDG | 8 cut(s) | 33, 159, 341, 380, 401, 516, 543, 558 |
| Lsp1109I | GCAGC | 1 cut(s) | 317 |
| LweI | GCATC | 1 cut(s) | 130 |
| MalI | GATC | 5 cut(s) | 18, 62, 132, 243, 494 |
| MboI | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| MboII | GAAGA | 1 cut(s) | 502 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MhlI | GDGCHC | 1 cut(s) | 262 |
| MluCI | AATT | 3 cut(s) | 12, 405, 560 |
| MlyI | GAGTC | 3 cut(s) | 353, 477, 580 |
| MmeI | TCCRAC | 1 cut(s) | 271 |
| MnlI | CCTC | 2 cut(s) | 193, 552 |
| MseI | TTAA | 1 cut(s) | 348 |
| MslI | CAYNNNNRTG | 1 cut(s) | 485 |
| MspR9I | CCNGG | 1 cut(s) | 531 |
| Mva1269I | GAATGC | 1 cut(s) | 39 |
| MvaI | CCWGG | 1 cut(s) | 531 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 545 |
| NdeI | CATATG | 1 cut(s) | 79 |
| NdeII | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| NlaIII | CATG | 1 cut(s) | 278 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 39 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 229 |
| PkrI | GCNGC | 1 cut(s) | 307 |
| PleI | GAGTC | 3 cut(s) | 353, 476, 579 |
| PpsI | GAGTC | 3 cut(s) | 353, 476, 579 |
| Psp6I | CCWGG | 1 cut(s) | 529 |
| PspGI | CCWGG | 1 cut(s) | 529 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| RseI | CAYNNNNRTG | 1 cut(s) | 485 |
| SaqAI | TTAA | 1 cut(s) | 348 |
| SatI | GCNGC | 1 cut(s) | 306 |
| Sau3AI | GATC | 5 cut(s) | 16, 60, 130, 241, 492 |
| SchI | GAGTC | 3 cut(s) | 353, 477, 580 |
| ScrFI | CCNGG | 1 cut(s) | 531 |
| SduI | GDGCHC | 1 cut(s) | 262 |
| SetI | ASST | 6 cut(s) | 151, 270, 357, 396, 420, 434 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 485 |
| SmlI | CTYRAG | 1 cut(s) | 314 |
| SmoI | CTYRAG | 1 cut(s) | 314 |
| Sse9I | AATT | 3 cut(s) | 12, 405, 560 |
| StyD4I | CCNGG | 1 cut(s) | 529 |
| TaaI | ACNGT | 1 cut(s) | 567 |
| TaqI | TCGA | 2 cut(s) | 252, 520 |
| TasI | AATT | 3 cut(s) | 12, 405, 560 |
| Tru1I | TTAA | 1 cut(s) | 348 |
| Tru9I | TTAA | 1 cut(s) | 348 |
| TseI | GCWGC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 3 cut(s) | 263, 488, 566 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 229 |