Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0174381 |
| rosa_multiflora | Rmu_sc0003314.1_g000002 Rmu_sc0010418.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00260290 |
| rosa_rugosa | Rorug07G0025100 |
| rosa_samantha | Rh7AG152700 Rh7BG154200 Rh7CG157800 Rh7DG153600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 240, 342 |
| AciI | CCGC | 1 cut(s) | 238 |
| AclWI | GGATC | 1 cut(s) | 157 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 112, 113 |
| AjnI | CCWGG | 1 cut(s) | 272 |
| AluBI | AGCT | 2 cut(s) | 70, 217 |
| AluI | AGCT | 2 cut(s) | 70, 217 |
| Alw21I | GWGCWC | 1 cut(s) | 219 |
| AlwI | GGATC | 1 cut(s) | 157 |
| AoxI | GGCC | 1 cut(s) | 116 |
| ApaI | GGGCCC | 1 cut(s) | 120 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| AspS9I | GGNCC | 3 cut(s) | 93, 116, 117 |
| AsuC2I | CCSGG | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AvaII | GGWCC | 1 cut(s) | 93 |
| BaeGI | GKGCMC | 1 cut(s) | 120 |
| BanII | GRGCYC | 2 cut(s) | 120, 219 |
| Bbv12I | GWGCWC | 1 cut(s) | 219 |
| BccI | CCATC | 3 cut(s) | 151, 203, 304 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 7, 41 |
| BciT130I | CCWGG | 1 cut(s) | 274 |
| BcnI | CCSGG | 1 cut(s) | 107 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 274 |
| Bme18I | GGWCC | 1 cut(s) | 93 |
| BmgT120I | GGNCC | 3 cut(s) | 93, 116, 117 |
| BmiI | GGNNCC | 2 cut(s) | 117, 118 |
| BmrFI | CCNGG | 2 cut(s) | 107, 274 |
| BpuMI | CCSGG | 1 cut(s) | 107 |
| BsaBI | GATNNNNATC | 2 cut(s) | 142, 336 |
| BsaJI | CCNNGG | 1 cut(s) | 81 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 112, 113 |
| Bse8I | GATNNNNATC | 2 cut(s) | 142, 336 |
| BseBI | CCWGG | 1 cut(s) | 274 |
| BseDI | CCNNGG | 1 cut(s) | 81 |
| BseGI | GGATG | 1 cut(s) | 115 |
| BseJI | GATNNNNATC | 2 cut(s) | 142, 336 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 112, 113 |
| BseMII | CTCAG | 2 cut(s) | 59, 244 |
| BseSI | GKGCMC | 1 cut(s) | 120 |
| Bsh1236I | CGCG | 2 cut(s) | 240, 342 |
| BshFI | GGCC | 1 cut(s) | 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 219 |
| BsiSI | CCGG | 1 cut(s) | 107 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 112, 113 |
| BsnI | GGCC | 1 cut(s) | 118 |
| Bsp120I | GGGCCC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 2 cut(s) | 120, 219 |
| Bsp143I | GATC | 3 cut(s) | 149, 180, 244 |
| BspACI | CCGC | 1 cut(s) | 238 |
| BspANI | GGCC | 1 cut(s) | 118 |
| BspCNI | CTCAG | 2 cut(s) | 58, 243 |
| BspFNI | CGCG | 2 cut(s) | 240, 342 |
| BspLI | GGNNCC | 2 cut(s) | 117, 118 |
| BspPI | GGATC | 1 cut(s) | 157 |
| BssECI | CCNNGG | 1 cut(s) | 81 |
| BssMI | GATC | 3 cut(s) | 149, 180, 244 |
| BssT1I | CCWWGG | 1 cut(s) | 81 |
| Bst2UI | CCWGG | 1 cut(s) | 274 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 1 cut(s) | 41 |
| BstDEI | CTNAG | 2 cut(s) | 45, 230 |
| BstF5I | GGATG | 1 cut(s) | 115 |
| BstFNI | CGCG | 2 cut(s) | 240, 342 |
| BstKTI | GATC | 3 cut(s) | 152, 183, 247 |
| BstMBI | GATC | 3 cut(s) | 149, 180, 244 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstNI | CCWGG | 1 cut(s) | 274 |
| BstSCI | CCNGG | 2 cut(s) | 105, 272 |
| BstSLI | GKGCMC | 1 cut(s) | 120 |
| BstUI | CGCG | 2 cut(s) | 240, 342 |
| BstX2I | RGATCY | 1 cut(s) | 149 |
| BstYI | RGATCY | 1 cut(s) | 149 |
| BsuRI | GGCC | 1 cut(s) | 118 |
| BtgZI | GCGATG | 1 cut(s) | 323 |
| BtsCI | GGATG | 1 cut(s) | 115 |
| BtsIMutI | CAGTG | 1 cut(s) | 95 |
| Cac8I | GCNNGC | 1 cut(s) | 41 |
| Cfr13I | GGNCC | 3 cut(s) | 93, 116, 117 |
| CviAII | CATG | 2 cut(s) | 283, 328 |
| CviJI | RGCY | 4 cut(s) | 70, 118, 217, 272 |
| CviKI_1 | RGCY | 4 cut(s) | 70, 118, 217, 272 |
| DdeI | CTNAG | 2 cut(s) | 45, 230 |
| DpnI | GATC | 3 cut(s) | 151, 182, 246 |
| DpnII | GATC | 3 cut(s) | 149, 180, 244 |
| Ecl136II | GAGCTC | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 1 cut(s) | 81 |
| Eco24I | GRGCYC | 2 cut(s) | 120, 219 |
| Eco47I | GGWCC | 1 cut(s) | 93 |
| Eco53kI | GAGCTC | 1 cut(s) | 217 |
| EcoICRI | GAGCTC | 1 cut(s) | 217 |
| EcoO109I | RGGNCCY | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 272 |
| EcoT14I | CCWWGG | 1 cut(s) | 81 |
| EcoT38I | GRGCYC | 2 cut(s) | 120, 219 |
| ErhI | CCWWGG | 1 cut(s) | 81 |
| FaeI | CATG | 2 cut(s) | 286, 331 |
| FaiI | YATR | 7 cut(s) | 134, 174, 254, 284, 308, 325, 329 |
| FatI | CATG | 2 cut(s) | 282, 327 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 122 |
| FriOI | GRGCYC | 2 cut(s) | 120, 219 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeIII | GGCC | 1 cut(s) | 118 |
| HapII | CCGG | 1 cut(s) | 107 |
| Hin1II | CATG | 2 cut(s) | 286, 331 |
| HindIII | AAGCTT | 1 cut(s) | 68 |
| HinfI | GANTC | 4 cut(s) | 203, 225, 234, 332 |
| HpaII | CCGG | 1 cut(s) | 107 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy166II | GTNNAC | 1 cut(s) | 93 |
| Hpy188I | TCNGA | 3 cut(s) | 208, 233, 249 |
| Hpy188III | TCNNGA | 1 cut(s) | 147 |
| Hpy8I | GTNNAC | 1 cut(s) | 93 |
| Hpy99I | CGWCG | 1 cut(s) | 245 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HpyF3I | CTNAG | 2 cut(s) | 45, 230 |
| Hsp92II | CATG | 2 cut(s) | 286, 331 |
| Kzo9I | GATC | 3 cut(s) | 149, 180, 244 |
| LpnPI | CCDG | 6 cut(s) | 120, 132, 170, 191, 259, 286 |
| MaeIII | GTNAC | 1 cut(s) | 262 |
| MalI | GATC | 3 cut(s) | 151, 182, 246 |
| MboI | GATC | 3 cut(s) | 149, 180, 244 |
| MflI | RGATCY | 1 cut(s) | 149 |
| MhlI | GDGCHC | 2 cut(s) | 120, 219 |
| MluCI | AATT | 1 cut(s) | 75 |
| MlyI | GAGTC | 1 cut(s) | 212 |
| MnlI | CCTC | 3 cut(s) | 35, 54, 239 |
| MseI | TTAA | 1 cut(s) | 195 |
| MspI | CCGG | 1 cut(s) | 107 |
| MspR9I | CCNGG | 2 cut(s) | 107, 274 |
| MvaI | CCWGG | 1 cut(s) | 274 |
| MvnI | CGCG | 2 cut(s) | 240, 342 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NciI | CCSGG | 1 cut(s) | 107 |
| NdeII | GATC | 3 cut(s) | 149, 180, 244 |
| NlaIII | CATG | 2 cut(s) | 286, 331 |
| NlaIV | GGNNCC | 2 cut(s) | 117, 118 |
| NmuCI | GTSAC | 1 cut(s) | 262 |
| PfeI | GAWTC | 3 cut(s) | 225, 234, 332 |
| PfoI | TCCNGGA | 1 cut(s) | 105 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 1 cut(s) | 211 |
| PpsI | GAGTC | 1 cut(s) | 211 |
| Psp124BI | GAGCTC | 1 cut(s) | 219 |
| Psp6I | CCWGG | 1 cut(s) | 272 |
| PspGI | CCWGG | 1 cut(s) | 272 |
| PspN4I | GGNNCC | 2 cut(s) | 117, 118 |
| PspOMI | GGGCCC | 1 cut(s) | 116 |
| PspPI | GGNCC | 3 cut(s) | 93, 116, 117 |
| PsuI | RGATCY | 1 cut(s) | 149 |
| SacI | GAGCTC | 1 cut(s) | 219 |
| SaqAI | TTAA | 1 cut(s) | 195 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 3 cut(s) | 149, 180, 244 |
| Sau96I | GGNCC | 3 cut(s) | 93, 116, 117 |
| SchI | GAGTC | 1 cut(s) | 212 |
| ScrFI | CCNGG | 2 cut(s) | 107, 274 |
| SduI | GDGCHC | 2 cut(s) | 120, 219 |
| SetI | ASST | 2 cut(s) | 72, 219 |
| SinI | GGWCC | 1 cut(s) | 93 |
| Sse9I | AATT | 1 cut(s) | 75 |
| SsiI | CCGC | 1 cut(s) | 238 |
| SstI | GAGCTC | 1 cut(s) | 219 |
| StyD4I | CCNGG | 2 cut(s) | 105, 272 |
| StyI | CCWWGG | 1 cut(s) | 81 |
| TaqI | TCGA | 1 cut(s) | 279 |
| TasI | AATT | 1 cut(s) | 75 |
| TfiI | GAWTC | 3 cut(s) | 225, 234, 332 |
| Tru1I | TTAA | 1 cut(s) | 195 |
| Tru9I | TTAA | 1 cut(s) | 195 |
| TscAI | CASTG | 1 cut(s) | 95 |
| TseFI | GTSAC | 1 cut(s) | 262 |
| TseI | GCWGC | 1 cut(s) | 4 |
| Tsp45I | GTSAC | 1 cut(s) | 262 |
| TspDTI | ATGAA | 2 cut(s) | 307, 312 |
| TspRI | CASTG | 1 cut(s) | 95 |
| VpaK11BI | GGWCC | 1 cut(s) | 93 |