Rh7DG277000

complex. Subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
29842999 .. 29846235
3237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG277000.1

Sequence Viewer

Length: 279 bp
ATGGAGCGAGAGGTGATTCAAGCAGAGCTGGTGTTGCCAAACAAGCTGAGCTTCAAGAGGGTTCAGATGAATGAGAAGTACCCAAAAGGCCAGCCCAGAGGGAGATGGAAGCACCTCAAACAGATCATTCAGGCCGAGAATTATCACAACTACCCTCCTGATGAACCCAATTATGTCAATATAGAGTCGCCACCCTCTATGCATCCATGCAAGAGAATTTGTGATATAACAGGATATGAGGTATTATTGTTATCTTTACAAGATATGGATATTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

92

Amino Acids

10.86

Weight (kDa)

6.82

Isoelectric Point (pI)

66.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 216
AfaI GTAC 1 cut(s) 80
AgsI TTSAA 2 cut(s) 20, 55
AluBI AGCT 3 cut(s) 28, 46, 51
AluI AGCT 3 cut(s) 28, 46, 51
AoxI GGCC 2 cut(s) 88, 132
ApoI RAATTY 1 cut(s) 216
AsuHPI GGTGA 1 cut(s) 25
BccI CCATC 1 cut(s) 99
BlpI GCTNAGC 1 cut(s) 47
BmsI GCATC 1 cut(s) 211
Bpu1102I GCTNAGC 1 cut(s) 47
BseGI GGATG 1 cut(s) 202
BseMII CTCAG 1 cut(s) 38
BshFI GGCC 2 cut(s) 90, 134
BsnI GGCC 2 cut(s) 90, 134
Bsp143I GATC 1 cut(s) 123
Bsp1720I GCTNAGC 1 cut(s) 47
BspANI GGCC 2 cut(s) 90, 134
BspCNI CTCAG 1 cut(s) 39
BssMI GATC 1 cut(s) 123
BstC8I GCNNGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 47
BstF5I GGATG 1 cut(s) 202
BstKTI GATC 1 cut(s) 126
BstMBI GATC 1 cut(s) 123
BstMWI GCNNNNNNNGC 2 cut(s) 34, 43
BsuRI GGCC 2 cut(s) 90, 134
BtsCI GGATG 1 cut(s) 202
Cac8I GCNNGC 1 cut(s) 92
Csp6I GTAC 1 cut(s) 79
CviAII CATG 1 cut(s) 207
CviJI RGCY 6 cut(s) 28, 46, 51, 90, 94, 134
CviKI_1 RGCY 6 cut(s) 28, 46, 51, 90, 94, 134
CviQI GTAC 1 cut(s) 79
DdeI CTNAG 1 cut(s) 47
DpnI GATC 1 cut(s) 125
DpnII GATC 1 cut(s) 123
EcoT22I ATGCAT 1 cut(s) 204
FaeI CATG 1 cut(s) 210
FaiI YATR 8 cut(s) 174, 182, 200, 208, 227, 237, 266, 277
FalI AAGNNNNNCTT 2 cut(s) 35, 67
FatI CATG 1 cut(s) 206
FokI GGATG 1 cut(s) 189
HaeIII GGCC 2 cut(s) 90, 134
Hin1II CATG 1 cut(s) 210
HinfI GANTC 2 cut(s) 16, 185
HphI GGTGA 1 cut(s) 25
Hpy188I TCNGA 1 cut(s) 66
Hpy188III TCNNGA 2 cut(s) 55, 158
HpyCH4V TGCA 2 cut(s) 202, 210
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 43
HpyF3I CTNAG 1 cut(s) 47
Hsp92II CATG 1 cut(s) 210
Kzo9I GATC 1 cut(s) 123
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 6 cut(s) 14, 104, 109, 116, 171, 216
LweI GCATC 1 cut(s) 211
MalI GATC 1 cut(s) 125
MboI GATC 1 cut(s) 123
MluCI AATT 3 cut(s) 139, 169, 216
MlyI GAGTC 1 cut(s) 194
MnlI CCTC 7 cut(s) 4, 51, 92, 125, 165, 205, 232
Mph1103I ATGCAT 1 cut(s) 204
MwoI GCNNNNNNNGC 2 cut(s) 34, 43
NdeII GATC 1 cut(s) 123
NlaIII CATG 1 cut(s) 210
NmeAIII GCCGAG 1 cut(s) 160
NsiI ATGCAT 1 cut(s) 204
PfeI GAWTC 1 cut(s) 16
PleI GAGTC 1 cut(s) 193
PpsI GAGTC 1 cut(s) 193
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
Sau3AI GATC 1 cut(s) 123
SchI GAGTC 1 cut(s) 194
SetI ASST 6 cut(s) 15, 30, 48, 53, 117, 243
SfaNI GCATC 1 cut(s) 211
Sse9I AATT 3 cut(s) 139, 169, 216
TasI AATT 3 cut(s) 139, 169, 216
TfiI GAWTC 1 cut(s) 16
TspDTI ATGAA 2 cut(s) 83, 177
XapI RAATTY 1 cut(s) 216
Zsp2I ATGCAT 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.