Rh7DG304400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
35235531 .. 35236017
487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG304400.1

Sequence Viewer

Length: 303 bp
ATGACGAGCAATTGGAAGAGGACACTGGGAAATGTGAGGTCATTCATAGGCAATTCGATGGGAGGCCTAAGAGGAGGAAGCAACTTGGCCTCGTGGGTAGTCGCCGGAACCCTAGCTTACTTCCTCTGGGTCAAGCCCTCACAAGAACTCAAGCGAGAACAACAGGAAAGGGCTGCTTTGGCAGCTTTGGCAGAAGCTTCGAATCCAAATAGATACATAGAGAAACGGAAACCCATTCCTGATCCACAGGAGACTGGACTGATACATGGAAACAAGAATAGAAATAGAAAACCAGATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

100

Amino Acids

11.19

Weight (kDa)

10.27

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 236
AluBI AGCT 3 cut(s) 116, 185, 197
AluI AGCT 3 cut(s) 116, 185, 197
Alw26I GTCTC 1 cut(s) 245
AlwI GGATC 1 cut(s) 236
AoxI GGCC 2 cut(s) 64, 87
ApeKI GCWGC 2 cut(s) 173, 182
AsuII TTCGAA 1 cut(s) 200
BauI CACGAG 1 cut(s) 91
BbvI GCAGC 2 cut(s) 160, 194
BccI CCATC 1 cut(s) 52
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 1 cut(s) 113
BisI GCNGC 2 cut(s) 174, 183
BlsI GCNGC 2 cut(s) 175, 184
BmiI GGNNCC 1 cut(s) 109
BmrI ACTGGG 1 cut(s) 35
BmuI ACTGGG 1 cut(s) 35
Bpu14I TTCGAA 1 cut(s) 200
BpuEI CTTGAG 1 cut(s) 134
Bse1I ACTGG 2 cut(s) 30, 259
BseNI ACTGG 2 cut(s) 30, 259
BseRI GAGGAG 1 cut(s) 87
BseXI GCAGC 2 cut(s) 160, 194
BshFI GGCC 2 cut(s) 66, 89
BsiSI CCGG 1 cut(s) 105
BsmAI GTCTC 1 cut(s) 245
BsnI GGCC 2 cut(s) 66, 89
Bsp119I TTCGAA 1 cut(s) 200
Bsp143I GATC 1 cut(s) 241
BspANI GGCC 2 cut(s) 66, 89
BspLI GGNNCC 1 cut(s) 109
BspPI GGATC 1 cut(s) 236
BspT104I TTCGAA 1 cut(s) 200
BsrI ACTGG 2 cut(s) 30, 259
BssMI GATC 1 cut(s) 241
BssSI CACGAG 1 cut(s) 91
Bst2BI CACGAG 1 cut(s) 91
Bst6I CTCTTC 1 cut(s) 11
BstBI TTCGAA 1 cut(s) 200
BstDEI CTNAG 1 cut(s) 68
BstKTI GATC 1 cut(s) 244
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 1 cut(s) 241
BstMWI GCNNNNNNNGC 3 cut(s) 179, 182, 188
BstV1I GCAGC 2 cut(s) 160, 194
BsuRI GGCC 2 cut(s) 66, 89
BtsIMutI CAGTG 1 cut(s) 23
CviAII CATG 1 cut(s) 266
CviJI RGCY 7 cut(s) 66, 89, 116, 136, 173, 185, 197
CviKI_1 RGCY 7 cut(s) 66, 89, 116, 136, 173, 185, 197
DdeI CTNAG 1 cut(s) 68
DpnI GATC 1 cut(s) 243
DpnII GATC 1 cut(s) 241
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco147I AGGCCT 1 cut(s) 66
FaeI CATG 1 cut(s) 269
FaiI YATR 3 cut(s) 47, 218, 267
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FatI CATG 1 cut(s) 265
Fnu4HI GCNGC 2 cut(s) 174, 183
Fsp4HI GCNGC 2 cut(s) 174, 183
FspBI CTAG 1 cut(s) 113
GluI GCNGC 2 cut(s) 174, 183
HaeIII GGCC 2 cut(s) 66, 89
HapII CCGG 1 cut(s) 105
Hin1II CATG 1 cut(s) 269
HindIII AAGCTT 1 cut(s) 195
HinfI GANTC 1 cut(s) 202
HpaII CCGG 1 cut(s) 105
Hpy188III TCNNGA 1 cut(s) 239
HpyF10VI GCNNNNNNNGC 3 cut(s) 179, 182, 188
HpyF3I CTNAG 1 cut(s) 68
Hsp92II CATG 1 cut(s) 269
Kzo9I GATC 1 cut(s) 241
LpnPI CCDG 7 cut(s) 11, 112, 118, 149, 233, 240, 252
Lsp1109I GCAGC 2 cut(s) 160, 194
MaeI CTAG 1 cut(s) 113
MalI GATC 1 cut(s) 243
MboI GATC 1 cut(s) 241
MboII GAAGA 1 cut(s) 28
MfeI CAATTG 1 cut(s) 10
MluCI AATT 2 cut(s) 10, 52
MnlI CCTC 8 cut(s) 12, 30, 56, 65, 68, 100, 134, 148
MspI CCGG 1 cut(s) 105
MunI CAATTG 1 cut(s) 10
MwoI GCNNNNNNNGC 3 cut(s) 179, 182, 188
NdeII GATC 1 cut(s) 241
NlaIII CATG 1 cut(s) 269
NlaIV GGNNCC 1 cut(s) 109
NspV TTCGAA 1 cut(s) 200
PceI AGGCCT 1 cut(s) 66
PfeI GAWTC 1 cut(s) 202
PkrI GCNGC 2 cut(s) 175, 184
PspN4I GGNNCC 1 cut(s) 109
SatI GCNGC 2 cut(s) 174, 183
Sau3AI GATC 1 cut(s) 241
SetI ASST 4 cut(s) 41, 118, 187, 199
SfuI TTCGAA 1 cut(s) 200
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 2 cut(s) 10, 52
SseBI AGGCCT 1 cut(s) 66
SspMI CTAG 1 cut(s) 113
StuI AGGCCT 1 cut(s) 66
TaqI TCGA 2 cut(s) 56, 200
TasI AATT 2 cut(s) 10, 52
TfiI GAWTC 1 cut(s) 202
TscAI CASTG 1 cut(s) 30
TseI GCWGC 2 cut(s) 173, 182
TspDTI ATGAA 1 cut(s) 34
TspGWI ACGGA 1 cut(s) 241
TspRI CASTG 1 cut(s) 30
XspI CTAG 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.