Protease Do-like 9
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g12000 FvH4_5g37890 |
| rosa_laevigata | RLG00000023839 |
| rosa_multiflora | Rmu_sc0003332.1_g000026 |
| rosa_samantha | Rh2BG406700 Rh6AG089800 Rh6CG250200 Rh7DG071300 Rh7DG324400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 77, 295 |
| AcsI | RAATTY | 1 cut(s) | 266 |
| AgsI | TTSAA | 2 cut(s) | 266, 271 |
| AjiI | CACGTC | 1 cut(s) | 24 |
| AluBI | AGCT | 4 cut(s) | 41, 83, 126, 365 |
| AluI | AGCT | 4 cut(s) | 41, 83, 126, 365 |
| Alw26I | GTCTC | 1 cut(s) | 208 |
| AlwI | GGATC | 2 cut(s) | 77, 295 |
| ApoI | RAATTY | 1 cut(s) | 266 |
| AspLEI | GCGC | 1 cut(s) | 183 |
| AsuC2I | CCSGG | 1 cut(s) | 305 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 228, 260 |
| BccI | CCATC | 3 cut(s) | 115, 125, 146 |
| BceAI | ACGGC | 2 cut(s) | 334, 384 |
| BclI | TGATCA | 1 cut(s) | 43 |
| BcnI | CCSGG | 1 cut(s) | 305 |
| BcoDI | GTCTC | 1 cut(s) | 208 |
| BfmI | CTRYAG | 2 cut(s) | 78, 231 |
| Bme1390I | CCNGG | 1 cut(s) | 305 |
| BmgBI | CACGTC | 1 cut(s) | 24 |
| BmrFI | CCNGG | 1 cut(s) | 305 |
| BpmI | CTGGAG | 1 cut(s) | 69 |
| BpuMI | CCSGG | 1 cut(s) | 305 |
| BsaBI | GATNNNNATC | 1 cut(s) | 93 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 188, 218 |
| Bse1I | ACTGG | 1 cut(s) | 223 |
| Bse8I | GATNNNNATC | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 39 |
| BseJI | GATNNNNATC | 1 cut(s) | 93 |
| BseMII | CTCAG | 1 cut(s) | 381 |
| BseNI | ACTGG | 1 cut(s) | 223 |
| BsiSI | CCGG | 1 cut(s) | 305 |
| BsmAI | GTCTC | 1 cut(s) | 208 |
| BsmBI | CGTCTC | 1 cut(s) | 208 |
| Bsp143I | GATC | 4 cut(s) | 13, 43, 69, 300 |
| BspCNI | CTCAG | 1 cut(s) | 382 |
| BspPI | GGATC | 2 cut(s) | 77, 295 |
| BsrI | ACTGG | 1 cut(s) | 223 |
| BssMI | GATC | 4 cut(s) | 13, 43, 69, 300 |
| Bst4CI | ACNGT | 1 cut(s) | 160 |
| BstDEI | CTNAG | 2 cut(s) | 122, 390 |
| BstF5I | GGATG | 1 cut(s) | 39 |
| BstHHI | GCGC | 1 cut(s) | 183 |
| BstKTI | GATC | 4 cut(s) | 16, 46, 72, 303 |
| BstMAI | GTCTC | 1 cut(s) | 208 |
| BstMBI | GATC | 4 cut(s) | 13, 43, 69, 300 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 178 |
| BstSCI | CCNGG | 1 cut(s) | 303 |
| BstSFI | CTRYAG | 2 cut(s) | 78, 231 |
| BtrI | CACGTC | 1 cut(s) | 24 |
| BtsCI | GGATG | 1 cut(s) | 39 |
| CfoI | GCGC | 1 cut(s) | 183 |
| CseI | GACGC | 1 cut(s) | 284 |
| CviAII | CATG | 1 cut(s) | 173 |
| CviJI | RGCY | 4 cut(s) | 41, 83, 126, 365 |
| CviKI_1 | RGCY | 4 cut(s) | 41, 83, 126, 365 |
| DdeI | CTNAG | 2 cut(s) | 122, 390 |
| DpnI | GATC | 4 cut(s) | 15, 45, 71, 302 |
| DpnII | GATC | 4 cut(s) | 13, 43, 69, 300 |
| EcoRI | GAATTC | 1 cut(s) | 266 |
| Esp3I | CGTCTC | 1 cut(s) | 208 |
| FaeI | CATG | 1 cut(s) | 176 |
| FaiI | YATR | 6 cut(s) | 174, 185, 216, 275, 339, 379 |
| FatI | CATG | 1 cut(s) | 172 |
| FbaI | TGATCA | 1 cut(s) | 43 |
| FokI | GGATG | 1 cut(s) | 46 |
| GlaI | GCGC | 1 cut(s) | 182 |
| GsuI | CTGGAG | 1 cut(s) | 69 |
| HapII | CCGG | 1 cut(s) | 305 |
| HgaI | GACGC | 1 cut(s) | 284 |
| HhaI | GCGC | 1 cut(s) | 183 |
| Hin1II | CATG | 1 cut(s) | 176 |
| Hin6I | GCGC | 1 cut(s) | 181 |
| HinP1I | GCGC | 1 cut(s) | 181 |
| HinfI | GANTC | 1 cut(s) | 89 |
| HpaII | CCGG | 1 cut(s) | 305 |
| Hpy188I | TCNGA | 3 cut(s) | 112, 300, 391 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 86 |
| HpyAV | CCTTC | 1 cut(s) | 60 |
| HpyCH4III | ACNGT | 1 cut(s) | 160 |
| HpyCH4IV | ACGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 146 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 178 |
| HpyF3I | CTNAG | 2 cut(s) | 122, 390 |
| HpySE526I | ACGT | 1 cut(s) | 23 |
| Hsp92II | CATG | 1 cut(s) | 176 |
| HspAI | GCGC | 1 cut(s) | 181 |
| Ksp22I | TGATCA | 1 cut(s) | 43 |
| Kzo9I | GATC | 4 cut(s) | 13, 43, 69, 300 |
| LmnI | GCTCC | 2 cut(s) | 88, 178 |
| LpnPI | CCDG | 6 cut(s) | 24, 99, 154, 204, 221, 318 |
| MaeII | ACGT | 1 cut(s) | 23 |
| MaeIII | GTNAC | 2 cut(s) | 194, 248 |
| MalI | GATC | 4 cut(s) | 15, 45, 71, 302 |
| MboI | GATC | 4 cut(s) | 13, 43, 69, 300 |
| MboII | GAAGA | 2 cut(s) | 89, 236 |
| MluCI | AATT | 1 cut(s) | 266 |
| MnlI | CCTC | 4 cut(s) | 209, 336, 340, 385 |
| MseI | TTAA | 1 cut(s) | 138 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MspA1I | CMGCKG | 1 cut(s) | 365 |
| MspI | CCGG | 1 cut(s) | 305 |
| MspR9I | CCNGG | 1 cut(s) | 305 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 178 |
| NciI | CCSGG | 1 cut(s) | 305 |
| NdeII | GATC | 4 cut(s) | 13, 43, 69, 300 |
| NlaIII | CATG | 1 cut(s) | 176 |
| PfeI | GAWTC | 1 cut(s) | 89 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 225, 257 |
| PvuII | CAGCTG | 1 cut(s) | 365 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SaqAI | TTAA | 1 cut(s) | 138 |
| Sau3AI | GATC | 4 cut(s) | 13, 43, 69, 300 |
| ScrFI | CCNGG | 1 cut(s) | 305 |
| SfcI | CTRYAG | 2 cut(s) | 78, 231 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sse9I | AATT | 1 cut(s) | 266 |
| SspI | AATATT | 1 cut(s) | 142 |
| StyD4I | CCNGG | 1 cut(s) | 303 |
| TaaI | ACNGT | 1 cut(s) | 160 |
| TaiI | ACGT | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 72 |
| TasI | AATT | 1 cut(s) | 266 |
| TfiI | GAWTC | 1 cut(s) | 89 |
| Tru1I | TTAA | 1 cut(s) | 138 |
| Tru9I | TTAA | 1 cut(s) | 138 |
| TspDTI | ATGAA | 1 cut(s) | 50 |
| XapI | RAATTY | 1 cut(s) | 266 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 215 |