Rw1G022860

U-box domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
48378759 .. 48383718
4960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022860.1

Sequence Viewer

Length: 2673 bp
ATGGCAGTTGTGAGTTCTGTGCCGGCAATGATGCGACCGGCTGAGCCAATAAGATATCCTGATATTTCAGATATGGGTAGTTTTGGAGAGATTGTGGTGGAACCTGTGGCTCGGGTGATCCAAGATATGATATATGTTACAGTGGGAACTTCTGTGAAGGAGAGCAAATTGAATCTGATATGGACATTGCACAACTCAGGAGGGAAGAGGGTTTGCATAGTTCATGTTCTCCAGCCTGCACAGATGATTCCAACGTCATTGGGAACTAAGTTCCCAGCAAGCCAAGTGAATCCTCAGGAAGTCAGAGCTTACCGTAAAAAGGAAAGGCAAGACATGCAGAAGTTGCTGGATGATTACCTTCGTATTTGTCGTGAAATGGGGGTTCGAGCAGAAAAACTAGATATTGAAATGGACAGTATTGAGAAGGGAATTGTGGAACTCATCTCTCAGCATGGAATCAGAAGGCTTGTTATGGGAGCAGCAGCAGACAAGTCCCATTCAAGGAAAATGACAGACCTCAAGTCTAAGAAAGCCATATACGTGCGTGAACATGCACCTGTTTTCTGTCGCATACAATTTGTTTGCAAGGGGTACCTTATACACACCAGGGAAGCGAGTTCAGATGCAGTTGATGCACAGTTTACATTGCTGCCACCAAGACCAAGCACCGACACTGAACAATCACCACACCATTTAAGATCACAATCTTCTGTGACACTTGGGCAGAATAATCGACCGTCACTCAGCAACCCAGCTCAAGATTTACTCCGCCGGGTAAGATCGACAAAATCCGGCAAATATGGAGGAATCGCAACAGATGTTACTGAAGGGCTTTCAACTCCATCAAGCAGCAGGTTGGAAGCAGAAGGGAGTGCTGATGAATGGGATCAGGCATCCAGGAGGAGTACTTCTGGATATTCATCATGCTCTTCTGCATTGGGTGATTTACCTTTGATACAGTTTGAGAGGACTGAGGGAAGTGAAAATGGGTCAAGAAACTCGAGTGCTCTTACTCATCTCAAAGATATTAATCGTTCATCCCCTCCCAGTGTATTGCAGGATGGAAATGTAAACGATACTCTTTATGATCATCTTGAGCAAGCGATGACAGAGGCTGAAAATGCAAAGCGAGAAGCATTTGAAGAGGCAATTAGGCGTGGGAAAGCTGAAAAAGATGCCATTGACGCTATACGAAGGGCCAAAGCATCAGAGTTCTTATACAATGAGGAATTGAGACAAAGAAAAGAAATTGAGGACACAGTAGCAAGAGAAAGAGAAGAACTTGAAAAGATGAAGAAGCAACGAGATGAAGTCATGGAAGAATTCAGGGCCGCCTTAGAACAAAGATCACAACTTGAGAGCCAAATTGCTGAGTCTGATCAGCTGGTTCAGTGCTTGGAGCAAAAGATCATATCTGCTGTGGATCTCTTACAAAATTACAAAAGAGAACGGGATGAGTTGCATGTAGAACGTGACAATGCTCTTAGAGAAGCAGAGGAGCTAAGGAAAAGACAAGGAGAGGCCTCAAGCACACAGATGCCTCAGTTCTTCTCTGATTTTTCATTTCCCGAGATTGAGGAAGCAACTCGAAATTTTGACCCATCACTTAAGATTGGAGAAGGTGGATATGGAAGCATTTTCAAAGGTTTCCTACGTCACACTGAGGTGGCTATAAAAATGCTAAATGCTCATAGTTTGCAAGGCCCCTCAGAATTCCAGCAAGAGGTGGATATATTAAGTAAGCTGAGGCATACCAATCTTGTCACACTCATTGGTGCCTGCCCAGAAGGTTGGACTCTGATCTATGAGTATCTTCCAAATGGAAGCCTTGAAGATCGACTAAGCTGCAAGGACAATACTCCCCCATTATCATGGCAAGCTCGAATACGCATTGCTACTGAGTTGTGTTCTGTCCTAATTTTTCTCCACTCCAGTAAACCACACAGCGTAGTACATGGTGATTTGAAACCCTCCAATATCCTCCTTGATGCTAACTTTGTTTGCAAACTTAGTGACTTTGGCATCAGTCGGCTCTTGTCTCGTGGTCAAGGTTCAAGCAACAACACAACACTCTGTTGCTGGACTGGTCCAAAAGGTACTTTCGCTTACATGGATCCTGAGTTTCTTTCATCGGGAGAGCTTACACCAAAGTCAGATGTGTATTCATTTGGAATTATACTCTTACGATTATTAACCGGAAAACCAGCATTGGGAATAACAAAGGAAGTACAGTATGCATTAGATTCTGGAAAGTTGGAAACCCTCTTGGATCCTTTAGTGGGAGACTGGCCATTTGTACAGGCTGAACAGTTGGCTCGCTTAGCATTGAGGTGTTGTGAGATGAGCCGGAAGTGCAGGGCAGACCTTGTGTCAGATGTGTGGAGGGTACTTGAACCAATGAGGGCTTCATGTGGCTCCTTATCATCATTCCGACTGGGTACTGAAGAGCACTTCCAACCTCCCTCATACTTCATCTGTCCCATTTTCCAGGAAGTCATGCAAGATCCACATGTTGCAGCAGATGGTTTCACTTATGAAGCAGAGGCTCTGAGGGGATGGCTGGACAGTGGTCATGACACTTCACCTATGACAAATCAGAAGCTCGAACACAAGAATCTCGTCCCCAACCACGCTCTTCGCTCTGCAATTCAGGAGTGGCTGCAACACCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

890

Amino Acids

100.0

Weight (kDa)

5.91

Isoelectric Point (pI)

48.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 537 - 784 7.7e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 537 - 739 1.1e-37 Protein tyrosine and serine/threonine kinase
U-box PF04564 821 - 890 8.9e-19 U-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 843
Acc65I GGTACC 1 cut(s) 591
AccB1I GGYRCC 2 cut(s) 591, 1775
AciI CCGC 2 cut(s) 769, 1332
AclWI GGATC 8 cut(s) 112, 894, 1431, 2108, 2121, 2264, 2277, 2498
AcoI YGGCCR 1 cut(s) 2288
AcsI RAATTY 3 cut(s) 1322, 1591, 1712
AcuI CTGAAG 2 cut(s) 846, 2463
AfaI GTAC 8 cut(s) 593, 907, 1953, 2098, 2229, 2298, 2388, 2440
AfiI CCNNNNNNNGG 5 cut(s) 319, 501, 1723, 2210, 2279
AflII CTTAAG 1 cut(s) 1607
AflIII ACRYGT 1 cut(s) 2509
AhdI GACNNNNNGTC 2 cut(s) 520, 2368
AjnI CCWGG 3 cut(s) 605, 896, 2487
AjuI GAANNNNNNNTTGG 2 cut(s) 2389, 2421
AleI CACNNNNGTG 1 cut(s) 1664
Alw21I GWGCWC 2 cut(s) 1009, 2451
Alw26I GTCTC 3 cut(s) 1228, 2043, 2277
AlwI GGATC 8 cut(s) 112, 894, 1431, 2108, 2121, 2264, 2277, 2498
AlwNI CAGNNNCTG 1 cut(s) 1115
Ama87I CYCGRG 3 cut(s) 111, 1000, 1568
AoxI GGCC 5 cut(s) 1197, 1329, 1521, 1702, 2288
ApeKI GCWGC 7 cut(s) 479, 482, 649, 849, 1845, 2516, 2659
ApoI RAATTY 3 cut(s) 1322, 1591, 1712
ArsI GACNNNNNNTTYG 2 cut(s) 2276, 2308
AseI ATTAAT 1 cut(s) 1029
Asp718I GGTACC 1 cut(s) 591
AspS9I GGNCC 4 cut(s) 1197, 1329, 1703, 2087
AsuC2I CCSGG 1 cut(s) 773
AsuHPI GGTGA 5 cut(s) 127, 675, 953, 1970, 2574
AvaI CYCGRG 3 cut(s) 111, 1000, 1568
AvaII GGWCC 1 cut(s) 2087
AxyI CCTNAGG 1 cut(s) 294
BalI TGGCCA 1 cut(s) 2290
BamHI GGATCC 2 cut(s) 2113, 2269
BanI GGYRCC 2 cut(s) 591, 1775
BauI CACGAG 1 cut(s) 2040
Bbv12I GWGCWC 2 cut(s) 1009, 2451
BbvCI CCTCAGC 1 cut(s) 1745
BbvI GCAGC 7 cut(s) 491, 494, 636, 861, 1832, 2528, 2646
BccI CCATC 5 cut(s) 850, 1055, 1609, 2516, 2550
BcgI CGANNNNNNTGC 4 cut(s) 713, 747, 1827, 1861
BciT130I CCWGG 3 cut(s) 607, 898, 2489
BclI TGATCA 2 cut(s) 1087, 1378
BcnI CCSGG 1 cut(s) 773
BcoDI GTCTC 3 cut(s) 1228, 2043, 2277
BfaI CTAG 1 cut(s) 398
BfrI CTTAAG 1 cut(s) 1607
BfuAI ACCTGC 1 cut(s) 843
BisI GCNGC 8 cut(s) 480, 483, 650, 850, 1332, 1846, 2517, 2660
BlpI GCTNAGC 2 cut(s) 42, 2320
BlsI GCNGC 8 cut(s) 481, 484, 651, 851, 1333, 1847, 2518, 2661
BmcAI AGTACT 1 cut(s) 907
Bme1390I CCNGG 4 cut(s) 607, 773, 898, 2489
Bme18I GGWCC 1 cut(s) 2087
BmeRI GACNNNNNGTC 2 cut(s) 520, 2368
BmeT110I CYCGRG 3 cut(s) 111, 1000, 1568
BmgT120I GGNCC 4 cut(s) 1197, 1329, 1703, 2087
BmiI GGNNCC 7 cut(s) 102, 593, 1705, 1777, 2115, 2271, 2416
BmrFI CCNGG 4 cut(s) 607, 773, 898, 2489
BmrI ACTGGG 2 cut(s) 1041, 2444
BmsI GCATC 9 cut(s) 21, 613, 622, 902, 1165, 1214, 1527, 1978, 2031
BmuI ACTGGG 2 cut(s) 1041, 2444
BoxI GACNNNNGTC 1 cut(s) 2568
BpmI CTGGAG 2 cut(s) 215, 1915
Bpu10I CCTNAGC 2 cut(s) 1502, 1745
Bpu1102I GCTNAGC 2 cut(s) 42, 2320
BpuEI CTTGAG 5 cut(s) 503, 741, 1115, 1376, 1510
BpuMI CCSGG 1 cut(s) 773
BsaAI YACGTR 1 cut(s) 541
BsaBI GATNNNNATC 3 cut(s) 703, 919, 1029
BsaJI CCNNGG 1 cut(s) 606
BsaWI WCCGGW 1 cut(s) 2195
BsaXI ACNNNNNCTCC 2 cut(s) 78, 108
Bsc4I CCNNNNNNNGG 5 cut(s) 319, 501, 1723, 2210, 2279
Bse118I RCCGGY 2 cut(s) 22, 37
Bse1I ACTGG 5 cut(s) 1047, 1932, 2089, 2291, 2439
Bse21I CCTNAGG 1 cut(s) 294
Bse3DI GCAATG 4 cut(s) 33, 185, 644, 1890
Bse8I GATNNNNATC 3 cut(s) 703, 919, 1029
BseBI CCWGG 3 cut(s) 607, 898, 2489
BseDI CCNNGG 1 cut(s) 606
BseGI GGATG 6 cut(s) 355, 893, 1037, 1066, 1459, 2561
BseJI GATNNNNATC 3 cut(s) 703, 919, 1029
BseLI CCNNNNNNNGG 5 cut(s) 319, 501, 1723, 2210, 2279
BseMI GCAATG 4 cut(s) 33, 185, 644, 1890
BseNI ACTGG 5 cut(s) 1047, 1932, 2089, 2291, 2439
BseRI GAGGAG 2 cut(s) 916, 1511
BseXI GCAGC 7 cut(s) 491, 494, 636, 861, 1832, 2528, 2646
BseYI CCCAGC 2 cut(s) 274, 751
BsgI GTGCAG 2 cut(s) 222, 2374
Bsh1285I CGRYCG 2 cut(s) 38, 737
BshFI GGCC 5 cut(s) 1199, 1331, 1523, 1704, 2290
BshNI GGYRCC 2 cut(s) 591, 1775
BsiEI CGRYCG 2 cut(s) 38, 737
BsiHKAI GWGCWC 2 cut(s) 1009, 2451
BsiHKCI CYCGRG 3 cut(s) 111, 1000, 1568
BsiSI CCGG 6 cut(s) 23, 38, 772, 792, 2196, 2347
BslFI GGGAC 3 cut(s) 478, 2463, 2606
BslI CCNNNNNNNGG 5 cut(s) 319, 501, 1723, 2210, 2279
BsmAI GTCTC 3 cut(s) 1228, 2043, 2277
BsmFI GGGAC 3 cut(s) 478, 2463, 2606
BsnI GGCC 5 cut(s) 1199, 1331, 1523, 1704, 2290
BsoBI CYCGRG 3 cut(s) 111, 1000, 1568
Bsp1286I GDGCHC 2 cut(s) 1009, 2451
Bsp1407I TGTACA 1 cut(s) 2296
Bsp1720I GCTNAGC 2 cut(s) 42, 2320
BspACI CCGC 2 cut(s) 769, 1332
BspANI GGCC 5 cut(s) 1199, 1331, 1523, 1704, 2290
BspHI TCATGA 1 cut(s) 2572
BspLI GGNNCC 7 cut(s) 102, 593, 1705, 1777, 2115, 2271, 2416
BspMI ACCTGC 1 cut(s) 843
BspPI GGATC 8 cut(s) 112, 894, 1431, 2108, 2121, 2264, 2277, 2498
BspQI GCTCTTC 3 cut(s) 934, 2439, 2640
BspT107I GGYRCC 2 cut(s) 591, 1775
BspTI CTTAAG 1 cut(s) 1607
BsrDI GCAATG 4 cut(s) 33, 185, 644, 1890
BsrFI RCCGGY 2 cut(s) 22, 37
BsrGI TGTACA 1 cut(s) 2296
BsrI ACTGG 5 cut(s) 1047, 1932, 2089, 2291, 2439
BssAI RCCGGY 2 cut(s) 22, 37
BssECI CCNNGG 1 cut(s) 606
BssSI CACGAG 1 cut(s) 2040
Bst2BI CACGAG 1 cut(s) 2040
Bst2UI CCWGG 3 cut(s) 607, 898, 2489
Bst6I CTCTTC 5 cut(s) 200, 934, 1137, 2439, 2640
BstAFI CTTAAG 1 cut(s) 1607
BstAPI GCANNNNNTGC 3 cut(s) 334, 343, 632
BstAUI TGTACA 1 cut(s) 2296
BstBAI YACGTR 1 cut(s) 541
BstC8I GCNNGC 7 cut(s) 24, 237, 280, 1101, 1780, 1878, 2317
BstF5I GGATG 6 cut(s) 355, 893, 1037, 1066, 1459, 2561
BstMAI GTCTC 3 cut(s) 1228, 2043, 2277
BstMCI CGRYCG 2 cut(s) 38, 737
BstMWI GCNNNNNNNGC 7 cut(s) 334, 343, 632, 1121, 1184, 2321, 2352
BstNI CCWGG 3 cut(s) 607, 898, 2489
BstNSI RCATGY 4 cut(s) 337, 554, 1466, 2513
BstPAI GACNNNNGTC 1 cut(s) 2568
BstSCI CCNGG 4 cut(s) 605, 771, 896, 2487
BstV1I GCAGC 7 cut(s) 491, 494, 636, 861, 1832, 2528, 2646
BstX2I RGATCY 4 cut(s) 1423, 2113, 2269, 2503
BstXI CCANNNNNNTGG 2 cut(s) 1791, 1872
BstYI RGATCY 4 cut(s) 1423, 2113, 2269, 2503
Bsu36I CCTNAGG 1 cut(s) 294
BsuRI GGCC 5 cut(s) 1199, 1331, 1523, 1704, 2290
BtgZI GCGATG 1 cut(s) 1118
BtsCI GGATG 6 cut(s) 355, 893, 1037, 1066, 1459, 2561
BtsIMutI CAGTG 6 cut(s) 147, 672, 1054, 1397, 1659, 2572
BveI ACCTGC 1 cut(s) 843
Cac8I GCNNGC 7 cut(s) 24, 237, 280, 1101, 1780, 1878, 2317
CaiI CAGNNNCTG 1 cut(s) 1115
CciI TCATGA 1 cut(s) 2572
Cfr10I RCCGGY 2 cut(s) 22, 37
Cfr13I GGNCC 4 cut(s) 1197, 1329, 1703, 2087
CseI GACGC 1 cut(s) 1193
Csp6I GTAC 8 cut(s) 592, 906, 1952, 2097, 2228, 2297, 2387, 2439
CviQI GTAC 8 cut(s) 592, 906, 1952, 2097, 2228, 2297, 2387, 2439
DriI GACNNNNNGTC 2 cut(s) 520, 2368
EaeI YGGCCR 1 cut(s) 2288
Eam1104I CTCTTC 5 cut(s) 200, 934, 1137, 2439, 2640
Eam1105I GACNNNNNGTC 2 cut(s) 520, 2368
EarI CTCTTC 5 cut(s) 200, 934, 1137, 2439, 2640
EciI GGCGGA 1 cut(s) 758
Eco147I AGGCCT 1 cut(s) 1523
Eco32I GATATC 1 cut(s) 56
Eco47I GGWCC 1 cut(s) 2087
Eco57I CTGAAG 2 cut(s) 846, 2463
Eco81I CCTNAGG 1 cut(s) 294
Eco88I CYCGRG 3 cut(s) 111, 1000, 1568
EcoO109I RGGNCCY 1 cut(s) 1703
EcoRI GAATTC 2 cut(s) 1322, 1712
EcoRII CCWGG 3 cut(s) 605, 896, 2487
EcoRV GATATC 1 cut(s) 56
EcoT22I ATGCAT 1 cut(s) 2239
FaqI GGGAC 3 cut(s) 478, 2463, 2606
FbaI TGATCA 2 cut(s) 1087, 1378
Fnu4HI GCNGC 8 cut(s) 480, 483, 650, 850, 1332, 1846, 2517, 2660
FokI GGATG 6 cut(s) 362, 880, 1024, 1073, 1466, 2568
Fsp4HI GCNGC 8 cut(s) 480, 483, 650, 850, 1332, 1846, 2517, 2660
FspBI CTAG 1 cut(s) 398
GluI GCNGC 8 cut(s) 480, 483, 650, 850, 1332, 1846, 2517, 2660
GsaI CCCAGC 2 cut(s) 278, 755
GsuI CTGGAG 2 cut(s) 215, 1915
HaeIII GGCC 5 cut(s) 1199, 1331, 1523, 1704, 2290
HapII CCGG 6 cut(s) 23, 38, 772, 792, 2196, 2347
HgaI GACGC 1 cut(s) 1193
HinfI GANTC 9 cut(s) 172, 247, 289, 456, 807, 1373, 1795, 2243, 2614
HpaII CCGG 6 cut(s) 23, 38, 772, 792, 2196, 2347
HphI GGTGA 5 cut(s) 127, 675, 953, 1970, 2574
Hpy166II GTNNAC 4 cut(s) 548, 642, 1072, 1937
Hpy8I GTNNAC 4 cut(s) 548, 642, 1072, 1937
HpyAV CCTTC 9 cut(s) 151, 368, 418, 456, 821, 860, 1188, 1613, 1781
HpyCH4IV ACGT 4 cut(s) 254, 540, 1471, 1654
HpyF10VI GCNNNNNNNGC 7 cut(s) 334, 343, 632, 1121, 1184, 2321, 2352
HpySE526I ACGT 4 cut(s) 254, 540, 1471, 1654
KpnI GGTACC 1 cut(s) 595
KroI GCCGGC 1 cut(s) 22
KroNI GCCGGC 1 cut(s) 24
Ksp22I TGATCA 2 cut(s) 1087, 1378
LguI GCTCTTC 3 cut(s) 934, 2439, 2640
LmnI GCTCC 4 cut(s) 476, 1399, 1498, 2420
Lsp1109I GCAGC 7 cut(s) 491, 494, 636, 861, 1832, 2528, 2646
LweI GCATC 9 cut(s) 21, 613, 622, 902, 1165, 1214, 1527, 1978, 2031
MaeI CTAG 1 cut(s) 398
MaeII ACGT 4 cut(s) 254, 540, 1471, 1654
MaeIII GTNAC 8 cut(s) 136, 712, 738, 820, 1472, 1655, 1762, 2012
MflI RGATCY 4 cut(s) 1423, 2113, 2269, 2503
MhlI GDGCHC 2 cut(s) 1009, 2451
MlsI TGGCCA 1 cut(s) 2290
MluNI TGGCCA 1 cut(s) 2290
MlyI GAGTC 2 cut(s) 1382, 1789
MmeI TCCRAC 6 cut(s) 275, 837, 1772, 2235, 2455, 2479
Mox20I TGGCCA 1 cut(s) 2290
Mph1103I ATGCAT 1 cut(s) 2239
MroNI GCCGGC 1 cut(s) 22
MscI TGGCCA 1 cut(s) 2290
MseI TTAA 5 cut(s) 695, 1029, 1608, 1736, 2192
MslI CAYNNNNRTG 5 cut(s) 539, 1535, 1664, 1870, 2329
Msp20I TGGCCA 1 cut(s) 2290
MspA1I CMGCKG 1 cut(s) 1384
MspCI CTTAAG 1 cut(s) 1607
MspI CCGG 6 cut(s) 23, 38, 772, 792, 2196, 2347
MspR9I CCNGG 4 cut(s) 607, 773, 898, 2489
MvaI CCWGG 3 cut(s) 607, 898, 2489
MwoI GCNNNNNNNGC 7 cut(s) 334, 343, 632, 1121, 1184, 2321, 2352
NaeI GCCGGC 1 cut(s) 24
NciI CCSGG 1 cut(s) 773
NgoMIV GCCGGC 1 cut(s) 22
NlaIV GGNNCC 7 cut(s) 102, 593, 1705, 1777, 2115, 2271, 2416
NmuCI GTSAC 6 cut(s) 712, 738, 1472, 1655, 1762, 2012
NsiI ATGCAT 1 cut(s) 2239
NspI RCATGY 4 cut(s) 337, 554, 1466, 2513
OliI CACNNNNGTG 1 cut(s) 1664
PaeR7I CTCGAG 1 cut(s) 1000
PagI TCATGA 1 cut(s) 2572
PceI AGGCCT 1 cut(s) 1523
PciI ACATGT 1 cut(s) 2509
PciSI GCTCTTC 3 cut(s) 934, 2439, 2640
PcsI WCGNNNNNNNCGW 1 cut(s) 367
PdiI GCCGGC 1 cut(s) 24
PfeI GAWTC 7 cut(s) 172, 247, 289, 456, 807, 2243, 2614
PfoI TCCNGGA 2 cut(s) 896, 2487
PkrI GCNGC 8 cut(s) 481, 484, 651, 851, 1333, 1847, 2518, 2661
PleI GAGTC 2 cut(s) 1381, 1789
PpsI GAGTC 2 cut(s) 1381, 1789
Ppu21I YACGTR 1 cut(s) 541
PscI ACATGT 1 cut(s) 2509
PshAI GACNNNNGTC 1 cut(s) 2568
PshBI ATTAAT 1 cut(s) 1029
Psp6I CCWGG 3 cut(s) 605, 896, 2487
PspFI CCCAGC 2 cut(s) 274, 751
PspGI CCWGG 3 cut(s) 605, 896, 2487
PspN4I GGNNCC 7 cut(s) 102, 593, 1705, 1777, 2115, 2271, 2416
PspPI GGNCC 4 cut(s) 1197, 1329, 1703, 2087
PspXI VCTCGAGB 1 cut(s) 1000
PstNI CAGNNNCTG 1 cut(s) 1115
PsuI RGATCY 4 cut(s) 1423, 2113, 2269, 2503
PvuII CAGCTG 1 cut(s) 1384
RsaI GTAC 8 cut(s) 593, 907, 1953, 2098, 2229, 2298, 2388, 2440
RsaNI GTAC 8 cut(s) 592, 906, 1952, 2097, 2228, 2297, 2387, 2439
RseI CAYNNNNRTG 5 cut(s) 539, 1535, 1664, 1870, 2329
SapI GCTCTTC 3 cut(s) 934, 2439, 2640
SaqAI TTAA 5 cut(s) 695, 1029, 1608, 1736, 2192
SatI GCNGC 8 cut(s) 480, 483, 650, 850, 1332, 1846, 2517, 2660
Sau96I GGNCC 4 cut(s) 1197, 1329, 1703, 2087
ScaI AGTACT 1 cut(s) 907
SchI GAGTC 2 cut(s) 1382, 1789
ScrFI CCNGG 4 cut(s) 607, 773, 898, 2489
SduI GDGCHC 2 cut(s) 1009, 2451
SfaNI GCATC 9 cut(s) 21, 613, 622, 902, 1165, 1214, 1527, 1978, 2031
Sfr274I CTCGAG 1 cut(s) 1000
SinI GGWCC 1 cut(s) 2087
SlaI CTCGAG 1 cut(s) 1000
SmiMI CAYNNNNRTG 5 cut(s) 539, 1535, 1664, 1870, 2329
SmlI CTYRAG 7 cut(s) 518, 756, 1000, 1094, 1355, 1525, 1607
SmoI CTYRAG 7 cut(s) 518, 756, 1000, 1094, 1355, 1525, 1607
SseBI AGGCCT 1 cut(s) 1523
SsiI CCGC 2 cut(s) 769, 1332
SspMI CTAG 1 cut(s) 398
StuI AGGCCT 1 cut(s) 1523
StyD4I CCNGG 4 cut(s) 605, 771, 896, 2487
TaiI ACGT 4 cut(s) 257, 543, 1474, 1657
TaqI TCGA 8 cut(s) 385, 733, 782, 1001, 1588, 1837, 1882, 2604
TatI WGTACW 4 cut(s) 905, 1951, 2227, 2296
TauI GCSGC 1 cut(s) 1334
TfiI GAWTC 7 cut(s) 172, 247, 289, 456, 807, 2243, 2614
Tru1I TTAA 5 cut(s) 695, 1029, 1608, 1736, 2192
Tru9I TTAA 5 cut(s) 695, 1029, 1608, 1736, 2192
TscAI CASTG 6 cut(s) 147, 679, 1054, 1397, 1666, 2572
TseFI GTSAC 6 cut(s) 712, 738, 1472, 1655, 1762, 2012
TseI GCWGC 7 cut(s) 479, 482, 649, 849, 1845, 2516, 2659
Tsp45I GTSAC 6 cut(s) 712, 738, 1472, 1655, 1762, 2012
TspRI CASTG 6 cut(s) 147, 679, 1054, 1397, 1666, 2572
Vha464I CTTAAG 1 cut(s) 1607
VpaK11BI GGWCC 1 cut(s) 2087
VspI ATTAAT 1 cut(s) 1029
XapI RAATTY 3 cut(s) 1322, 1591, 1712
XceI RCATGY 4 cut(s) 337, 554, 1466, 2513
XhoI CTCGAG 1 cut(s) 1000
XspI CTAG 1 cut(s) 398
ZrmI AGTACT 1 cut(s) 907
Zsp2I ATGCAT 1 cut(s) 2239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.