Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0006166

Physical Location & Seq

Genomic Coordinates Reverse (-)

5297449 .. 5303961

Gene Structure 6513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G005600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGCTTCGTGGCTCAAAGCTGCTGAAGATTTGTTTGAAGTTGTTGATCGAAGGGCAAAGCTTGTTGTCAATGAGTTGTCAGATGAGCAGTTGGCTGCCCAAGCACTAGAAGCTTCTAATGGGCAAGGACCTCAAGCCAAGCGGGCAAAGAAGAAGACCAAGGCTCAGAAGAGACAGTCAACAAATGAAACTTCAGAAACAAGTTCTCATAACAAAACAGAGTCTCTAGAAACAAGTGATTCTGCACATGCACAGATTAATATACTAACTCCACAAGTAGATTCCACACCTGAAAAAGCTAGTGATGTTCATTTAAATGACAATGGTGGGACGCCCTCTGAAAATCCTGTGATCCAAACAATTAACGAGCAGCAACAGGATCTTGAGAAAGACTCCACACCTAGCATTCCTATAACAGAGACACCAGGAATTGGAGTCAGTGAAACGGATGCTGGTCAACTGGAAGCTTCACCAATTCTTACTGATAGGGAATCTGCCACATCAACTTCAAATGGTGAGCTTGTGAATGAGAATGCCGCAGTTGGTCGGGAAGAACATCCTTTGCCGTTAATTGTCAAAGAAGTTGAGGTTGTGGATGAAAATAATCAAGTTCAGTCGGTTGATGTTGGCCAAGATAAAAGATCCAAAGATGCAGATGTTCCTCCAACCCTTGTCCAAGAGAGATCACAGTCTATAGCTACTGATGTCCCCAGTAACAGAAAAAATCAGTCGGAAGTTGCTGATGGCAACGAGGAACCAGTCCTTGAGAGAAGTAAGCAACTTGAGCATAAAGCTGGTAGCTCTCCCTCAAAAGTACCGGAACAGGATCAACTTGAGGAGGCTCAAGGATTGCTTAAAACGGCTGTTTCCACTGGTCAGTCTAAAGAAGCAAGGTTAGCGAGGGTTTGTGCTGGACTTTCATCCCGTCTTCAAGAATACAAATCTGAGAATGCACAGCTAGAGGAGCTTCTTGTGTCAGAGGGAGCTGGCAAGTCATATGAGGCTCGCATAAAGCAGCTACAAAAAGATTTGTCAGCATCCAAAAGCGAGGTGACAAGAATAGAGTCAAATATGGTTGAGGCCTTGGCAGCAAAAAATTCTGAAATCGAGGCACTTGTCAGTTCCATGGATGCACTTAAGAAACAGGCTGCTATATCTGAAGGAAATCTGGCTTCGCTGCAGGCAAACATGGAATCTATAATGAGAAATCGGGAACTGACGGAGACAAGAATGATGCAGGCTGTACGGGAGGAGTTGGCTTCTGTAGAACGGAGAGCTGAAGAAGAGCGTGCTGCACACAATGCTACCAAAATGGCTGCTATGGAAAGGGAAGTAGAATTGGAACATAGAGCCCTTGAGGCATCCACAGCCCTCGCAAGGACTCAGAGAATAGCTGATGAGAGGACTGCAAAGGCATCAGAACTTGAGCAGAAGATGGCATTGCTTGAGGTTGAGTGTGCCAACTTAAACCAAGAGCTGCAAGATATGGAAGCTCGTGCTCGGCGCGGGCAAAAGAAGCCACCAGAAGAGGCGAATCAAATGATTCAGGTGTGGCAGGAAGAAGTGGAACGTGCACGCCAAGGTCAGAGGGATGCAGAGGGCAAGCTTTCTTCCTTGGAGGCTGAAGTTCAAAAAATGAGAGTTGAAATGGCTGCCATGAAGAGGGATGCTGAGCACTACTCACGTCAGGAACACATGGAACTAGAGAAACGCTACCGTGAACTAACTGATTTACTGTACTACAAGCAAACACAATTAGAAACCATGGCCAGTGAAAAAGCTGCTGCAGAGTTCCAATTGGAGAAGGAATTGAAGCGTCTCCAGGAAGCACAGGTAGAGGCAGAAAGAAGTAGAGTTTCCCGCCGGGCATCAGCATCCTGGGAAGAAGACACTGAAATGAAGGCACTTGAGCCTCTTCCCTTGTATCACCGCCATATGGTTGGGGCAACCATGCAGTTGCAGAAGGCAGCAAAACTATTAGATTCAGGAGCTGTCCGGGCCACAAAATTTCTCTGGCGGTATCCAACTGCTCGGATTATCTTGCTATTCTACATGGTATTTGTGCATCTGTTCTTGATGTATTTGCTGCATCGCCTTCAGGCACAAGCAGATGACTTTTCCGCTAGAGAAGTTGCAGAGTCGATGGGACTTGCTAACACCAACTTACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000301 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0031090 GO:0031984 GO:0031985 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0071840 GO:0098588 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Golgin_A5

Protein Analysis

723

Amino Acids

80.71

Weight (kDa)

5.11

Isoelectric Point (pI)

53.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Golgin_A5	PF09787	473 - 696	7.5e-23	Golgin subfamily A member 5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006166)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19950 AT2G19950
fragaria_vesca	FvH4_1g05970 FvH4_1g05970 FvH4_1g05970
malus_domestica	MD02G1064300.v1.1 MD15G1195100.v1.1
prunus_persica	Prupe.7G221400_v2.0.a1 Prupe.7G221400_v2.0.a1 Prupe.7G221400_v2.0.a1 Prupe.7G221400_v2.0.a1
pyrus_communis	pycom02g05060 pycom15g17450
rosa_chinensis	RchiOBHm_Chr2g0091661
rosa_laevigata	RLG00000016241
rosa_multiflora	Rmu_sc0000897.1_g000010 Rmu_sc0036676.1_g000001 Rmu_sc0042722.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149820
rosa_rugosa	Rorug02G0019300 Rorug02G0019400 Rorug02G0019500
rosa_samantha	Rh2AG064500 Rh2BG063700 Rh2CG065400 Rh2DG063800
rosa_wichuraiana	Rw2G005600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	431
AccII	CGCG	1 cut(s)	1506
AciI	CCGC	7 cut(s)	142, 537, 1506, 1861, 1930, 2017, 2121
AclWI	GGATC	4 cut(s)	346, 387, 636, 834
AcoI	YGGCCR	2 cut(s)	628, 1767
AcsI	RAATTY	2 cut(s)	1096, 2006
AcuI	CTGAAG	6 cut(s)	45, 177, 1179, 1299, 1644, 2081
AcyI	GRCGYC	1 cut(s)	332
AfaI	GTAC	3 cut(s)	816, 1245, 1739
AfiI	CCNNNNNNNGG	4 cut(s)	431, 1377, 1662, 1936
AflII	CTTAAG	1 cut(s)	1136
AgsI	TTSAA	6 cut(s)	38, 510, 932, 1631, 1646, 1813
AjiI	CACGTC	1 cut(s)	1685
AjnI	CCWGG	3 cut(s)	424, 1821, 1877
Alw21I	GWGCWC	3 cut(s)	1501, 1576, 1677
Alw26I	GTCTC	5 cut(s)	166, 228, 413, 1217, 1823
Alw44I	GTGCAC	1 cut(s)	1572
AlwI	GGATC	4 cut(s)	346, 387, 636, 834
AlwNI	CAGNNNCTG	1 cut(s)	1991
AoxI	GGCC	4 cut(s)	628, 1080, 1767, 1998
ApaLI	GTGCAC	1 cut(s)	1572
ApoI	RAATTY	2 cut(s)	1096, 2006
AseI	ATTAAT	1 cut(s)	258
AspLEI	GCGC	1 cut(s)	1506
AspS9I	GGNCC	2 cut(s)	128, 1998
AsuC2I	CCSGG	2 cut(s)	1865, 1997
AsuHPI	GGTGA	4 cut(s)	462, 527, 1063, 1919
AvaII	GGWCC	1 cut(s)	128
BaeGI	GKGCMC	1 cut(s)	1576
BalI	TGGCCA	2 cut(s)	630, 1769
BanII	GRGCYC	1 cut(s)	1354
BauI	CACGAG	1 cut(s)	1494
BbsI	GAAGAC	3 cut(s)	161, 920, 1893
Bbv12I	GWGCWC	3 cut(s)	1501, 1576, 1677
BccI	CCATC	3 cut(s)	737, 1429, 2137
BceAI	ACGGC	2 cut(s)	550, 876
BciT130I	CCWGG	3 cut(s)	426, 1823, 1879
BciVI	GTATCC	1 cut(s)	2031
BcnI	CCSGG	2 cut(s)	1865, 1997
BcoDI	GTCTC	5 cut(s)	166, 228, 413, 1217, 1823
BfaI	CTAG	7 cut(s)	107, 227, 300, 402, 959, 1703, 2124
BfmI	CTRYAG	4 cut(s)	693, 1178, 1263, 1785
BfrI	CTTAAG	1 cut(s)	1136
BfuI	GTATCC	1 cut(s)	2031
BglI	GCCNNNNNGGC	2 cut(s)	143, 1358
BlpI	GCTNAGC	1 cut(s)	1671
Bme1390I	CCNGG	5 cut(s)	426, 1823, 1865, 1879, 1997
Bme18I	GGWCC	1 cut(s)	128
BmgBI	CACGTC	1 cut(s)	1685
BmgT120I	GGNCC	2 cut(s)	128, 1998
BmiI	GGNNCC	1 cut(s)	756
BmrFI	CCNGG	5 cut(s)	426, 1823, 1865, 1879, 1997
BmrI	ACTGGG	1 cut(s)	705
BmuI	ACTGGG	1 cut(s)	705
BpiI	GAAGAC	3 cut(s)	161, 920, 1893
BplI	GAGNNNNNCTC	4 cut(s)	377, 409, 1664, 1696
BpmI	CTGGAG	1 cut(s)	1805
Bpu1102I	GCTNAGC	1 cut(s)	1671
BpuMI	CCSGG	2 cut(s)	1865, 1997
BsaHI	GRCGYC	1 cut(s)	332
BsaJI	CCNNGG	7 cut(s)	159, 1083, 1125, 1579, 1614, 1764, 1878
BsaWI	WCCGGW	1 cut(s)	817
Bsc4I	CCNNNNNNNGG	4 cut(s)	431, 1377, 1662, 1936
Bse1I	ACTGG	5 cut(s)	465, 711, 758, 877, 1770
Bse3DI	GCAATG	1 cut(s)	1439
BseBI	CCWGG	3 cut(s)	426, 1823, 1879
BseDI	CCNNGG	7 cut(s)	159, 1083, 1125, 1579, 1614, 1764, 1878
BseLI	CCNNNNNNNGG	4 cut(s)	431, 1377, 1662, 1936
BseMI	GCAATG	1 cut(s)	1439
BseMII	CTCAG	4 cut(s)	179, 936, 1397, 1662
BseNI	ACTGG	5 cut(s)	465, 711, 758, 877, 1770
BseRI	GAGGAG	3 cut(s)	851, 977, 1265
BseSI	GKGCMC	1 cut(s)	1576
BsgI	GTGCAG	2 cut(s)	228, 1278
Bsh1236I	CGCG	1 cut(s)	1506
BshFI	GGCC	4 cut(s)	630, 1082, 1769, 2000
BsiHKAI	GWGCWC	3 cut(s)	1501, 1576, 1677
BsiSI	CCGG	3 cut(s)	818, 1864, 1996
BslFI	GGGAC	3 cut(s)	343, 692, 2160
BslI	CCNNNNNNNGG	4 cut(s)	431, 1377, 1662, 1936
BsmAI	GTCTC	5 cut(s)	166, 228, 413, 1217, 1823
BsmBI	CGTCTC	1 cut(s)	1823
BsmFI	GGGAC	3 cut(s)	343, 692, 2160
BsmI	GAATGC	3 cut(s)	405, 538, 955
BsnI	GGCC	4 cut(s)	630, 1082, 1769, 2000
Bsp1286I	GDGCHC	4 cut(s)	1354, 1501, 1576, 1677
Bsp143I	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
Bsp1720I	GCTNAGC	1 cut(s)	1671
Bsp19I	CCATGG	2 cut(s)	1125, 1764
BspACI	CCGC	7 cut(s)	142, 537, 1506, 1861, 1930, 2017, 2121
BspANI	GGCC	4 cut(s)	630, 1082, 1769, 2000
BspCNI	CTCAG	4 cut(s)	178, 937, 1396, 1663
BspFNI	CGCG	1 cut(s)	1506
BspLI	GGNNCC	1 cut(s)	756
BspMAI	CTGCAG	2 cut(s)	1182, 1789
BspPI	GGATC	4 cut(s)	346, 387, 636, 834
BspQI	GCTCTTC	1 cut(s)	1278
BspTI	CTTAAG	1 cut(s)	1136
BsrDI	GCAATG	1 cut(s)	1439
BsrI	ACTGG	5 cut(s)	465, 711, 758, 877, 1770
BssECI	CCNNGG	7 cut(s)	159, 1083, 1125, 1579, 1614, 1764, 1878
BssMI	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
BssNI	GRCGYC	1 cut(s)	332
BssSI	CACGAG	1 cut(s)	1494
BssT1I	CCWWGG	6 cut(s)	159, 1083, 1125, 1579, 1614, 1764
Bst2BI	CACGAG	1 cut(s)	1494
Bst2UI	CCWGG	3 cut(s)	426, 1823, 1879
Bst4CI	ACNGT	4 cut(s)	177, 690, 1718, 1737
Bst6I	CTCTTC	5 cut(s)	164, 1278, 1521, 1655, 1920
BstACI	GRCGYC	1 cut(s)	332
BstAFI	CTTAAG	1 cut(s)	1136
BstAPI	GCANNNNNTGC	1 cut(s)	1301
BstC8I	GCNNGC	9 cut(s)	144, 988, 1006, 1182, 1239, 1290, 1508, 1576, 1604
BstDEI	CTNAG	4 cut(s)	165, 945, 1383, 1671
BstDSI	CCRYGG	2 cut(s)	1125, 1764
BstFNI	CGCG	1 cut(s)	1506
BstHHI	GCGC	1 cut(s)	1506
BstKTI	GATC	6 cut(s)	49, 354, 382, 644, 686, 829
BstMAI	GTCTC	5 cut(s)	166, 228, 413, 1217, 1823
BstMBI	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
BstNI	CCWGG	3 cut(s)	426, 1823, 1879
BstNSI	RCATGY	1 cut(s)	251
BstSCI	CCNGG	5 cut(s)	424, 1821, 1863, 1877, 1995
BstSFI	CTRYAG	4 cut(s)	693, 1178, 1263, 1785
BstSLI	GKGCMC	1 cut(s)	1576
BstUI	CGCG	1 cut(s)	1506
BstV2I	GAAGAC	3 cut(s)	161, 920, 1893
BstX2I	RGATCY	2 cut(s)	379, 641
BstXI	CCANNNNNNTGG	1 cut(s)	1940
BstYI	RGATCY	2 cut(s)	379, 641
BsuI	GTATCC	1 cut(s)	2031
BsuRI	GGCC	4 cut(s)	630, 1082, 1769, 2000
BtgI	CCRYGG	2 cut(s)	1125, 1764
BtgZI	GCGATG	1 cut(s)	2075
BtrI	CACGTC	1 cut(s)	1685
BtsIMutI	CAGTG	4 cut(s)	445, 870, 1777, 1890
Cac8I	GCNNGC	9 cut(s)	144, 988, 1006, 1182, 1239, 1290, 1508, 1576, 1604
CaiI	CAGNNNCTG	1 cut(s)	1991
CfoI	GCGC	1 cut(s)	1506
Cfr13I	GGNCC	2 cut(s)	128, 1998
CseI	GACGC	2 cut(s)	340, 1805
Csp6I	GTAC	3 cut(s)	815, 1244, 1738
CviAII	CATG	9 cut(s)	248, 1126, 1189, 1657, 1696, 1765, 1951, 2053, 2169
CviQI	GTAC	3 cut(s)	815, 1244, 1738
DdeI	CTNAG	4 cut(s)	165, 945, 1383, 1671
DpnI	GATC	6 cut(s)	48, 353, 381, 643, 685, 828
DpnII	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
DraI	TTTAAA	1 cut(s)	315
EaeI	YGGCCR	2 cut(s)	628, 1767
Eam1104I	CTCTTC	5 cut(s)	164, 1278, 1521, 1655, 1920
EarI	CTCTTC	5 cut(s)	164, 1278, 1521, 1655, 1920
Eco130I	CCWWGG	6 cut(s)	159, 1083, 1125, 1579, 1614, 1764
Eco147I	AGGCCT	1 cut(s)	1082
Eco24I	GRGCYC	1 cut(s)	1354
Eco47I	GGWCC	1 cut(s)	128
Eco57I	CTGAAG	6 cut(s)	45, 177, 1179, 1299, 1644, 2081
EcoO109I	RGGNCCY	1 cut(s)	128
EcoRII	CCWGG	3 cut(s)	424, 1821, 1877
EcoT14I	CCWWGG	6 cut(s)	159, 1083, 1125, 1579, 1614, 1764
EcoT38I	GRGCYC	1 cut(s)	1354
ErhI	CCWWGG	6 cut(s)	159, 1083, 1125, 1579, 1614, 1764
Esp3I	CGTCTC	1 cut(s)	1823
FaeI	CATG	9 cut(s)	251, 1129, 1192, 1660, 1699, 1768, 1954, 2056, 2172
FalI	AAGNNNNNCTT	2 cut(s)	837, 869
FaqI	GGGAC	3 cut(s)	343, 692, 2160
FatI	CATG	9 cut(s)	247, 1125, 1188, 1656, 1695, 1764, 1950, 2052, 2168
FauI	CCCGC	3 cut(s)	135, 1499, 1868
FauNDI	CATATG	2 cut(s)	997, 1935
FriOI	GRGCYC	1 cut(s)	1354
FspBI	CTAG	7 cut(s)	107, 227, 300, 402, 959, 1703, 2124
GlaI	GCGC	1 cut(s)	1505
GsuI	CTGGAG	1 cut(s)	1805
HaeIII	GGCC	4 cut(s)	630, 1082, 1769, 2000
HapII	CCGG	3 cut(s)	818, 1864, 1996
HgaI	GACGC	2 cut(s)	340, 1805
HhaI	GCGC	1 cut(s)	1506
Hin1I	GRCGYC	1 cut(s)	332
Hin1II	CATG	9 cut(s)	251, 1129, 1192, 1660, 1699, 1768, 1954, 2056, 2172
Hin6I	GCGC	1 cut(s)	1504
HinP1I	GCGC	1 cut(s)	1504
HincII	GTYRAC	2 cut(s)	180, 458
HindII	GTYRAC	2 cut(s)	180, 458
HindIII	AAGCTT	4 cut(s)	59, 111, 465, 1604
HpaII	CCGG	3 cut(s)	818, 1864, 1996
HphI	GGTGA	4 cut(s)	462, 527, 1063, 1919
Hpy166II	GTNNAC	4 cut(s)	180, 458, 1574, 1721
Hpy188III	TCNNGA	8 cut(s)	227, 383, 548, 932, 1211, 1688, 1986, 2074
Hpy8I	GTNNAC	4 cut(s)	180, 458, 1574, 1721
HpyAV	CCTTC	6 cut(s)	45, 1154, 1798, 1894, 1957, 2105
HpyCH4III	ACNGT	4 cut(s)	177, 690, 1718, 1737
HpyCH4IV	ACGT	2 cut(s)	1570, 1684
HpyF3I	CTNAG	4 cut(s)	165, 945, 1383, 1671
HpySE526I	ACGT	2 cut(s)	1570, 1684
Hsp92I	GRCGYC	1 cut(s)	332
Hsp92II	CATG	9 cut(s)	251, 1129, 1192, 1660, 1699, 1768, 1954, 2056, 2172
HspAI	GCGC	1 cut(s)	1504
Kzo9I	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
LguI	GCTCTTC	1 cut(s)	1278
LmnI	GCTCC	3 cut(s)	964, 983, 1988
MaeI	CTAG	7 cut(s)	107, 227, 300, 402, 959, 1703, 2124
MaeII	ACGT	2 cut(s)	1570, 1684
MaeIII	GTNAC	2 cut(s)	713, 1051
MalI	GATC	6 cut(s)	48, 353, 381, 643, 685, 828
MboI	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
MfeI	CAATTG	1 cut(s)	1796
MflI	RGATCY	2 cut(s)	379, 641
MhlI	GDGCHC	4 cut(s)	1354, 1501, 1576, 1677
MlsI	TGGCCA	2 cut(s)	630, 1769
MluNI	TGGCCA	2 cut(s)	630, 1769
MlyI	GAGTC	6 cut(s)	230, 386, 444, 1073, 1375, 2147
MmeI	TCCRAC	3 cut(s)	689, 711, 2048
Mox20I	TGGCCA	2 cut(s)	630, 1769
MscI	TGGCCA	2 cut(s)	630, 1769
MseI	TTAA	7 cut(s)	258, 314, 363, 569, 855, 1137, 1466
MslI	CAYNNNNRTG	2 cut(s)	315, 1895
Msp20I	TGGCCA	2 cut(s)	630, 1769
MspCI	CTTAAG	1 cut(s)	1136
MspI	CCGG	3 cut(s)	818, 1864, 1996
MspR9I	CCNGG	5 cut(s)	426, 1823, 1865, 1879, 1997
MunI	CAATTG	1 cut(s)	1796
Mva1269I	GAATGC	3 cut(s)	405, 538, 955
MvaI	CCWGG	3 cut(s)	426, 1823, 1879
MvnI	CGCG	1 cut(s)	1506
NciI	CCSGG	2 cut(s)	1865, 1997
NcoI	CCATGG	2 cut(s)	1125, 1764
NdeI	CATATG	2 cut(s)	997, 1935
NdeII	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
NlaIII	CATG	9 cut(s)	251, 1129, 1192, 1660, 1699, 1768, 1954, 2056, 2172
NlaIV	GGNNCC	1 cut(s)	756
NmeAIII	GCCGAG	1 cut(s)	1480
NmuCI	GTSAC	1 cut(s)	1051
NspI	RCATGY	1 cut(s)	251
PceI	AGGCCT	1 cut(s)	1082
PciSI	GCTCTTC	1 cut(s)	1278
PctI	GAATGC	3 cut(s)	405, 538, 955
PfeI	GAWTC	7 cut(s)	239, 281, 491, 1193, 1534, 1543, 1982
PflMI	CCANNNNNTGG	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	1821
PleI	GAGTC	6 cut(s)	229, 386, 443, 1072, 1375, 2146
PpsI	GAGTC	6 cut(s)	229, 386, 443, 1072, 1375, 2146
PpuMI	RGGWCCY	1 cut(s)	128
PshBI	ATTAAT	1 cut(s)	258
Psp5II	RGGWCCY	1 cut(s)	128
Psp6I	CCWGG	3 cut(s)	424, 1821, 1877
PspGI	CCWGG	3 cut(s)	424, 1821, 1877
PspN4I	GGNNCC	1 cut(s)	756
PspPI	GGNCC	2 cut(s)	128, 1998
PspPPI	RGGWCCY	1 cut(s)	128
PstI	CTGCAG	2 cut(s)	1182, 1789
PstNI	CAGNNNCTG	1 cut(s)	1991
PsuI	RGATCY	2 cut(s)	379, 641
RsaI	GTAC	3 cut(s)	816, 1245, 1739
RsaNI	GTAC	3 cut(s)	815, 1244, 1738
RseI	CAYNNNNRTG	2 cut(s)	315, 1895
SapI	GCTCTTC	1 cut(s)	1278
SaqAI	TTAA	7 cut(s)	258, 314, 363, 569, 855, 1137, 1466
Sau3AI	GATC	6 cut(s)	46, 351, 379, 641, 683, 826
Sau96I	GGNCC	2 cut(s)	128, 1998
SchI	GAGTC	6 cut(s)	230, 386, 444, 1073, 1375, 2147
ScrFI	CCNGG	5 cut(s)	426, 1823, 1865, 1879, 1997
SduI	GDGCHC	4 cut(s)	1354, 1501, 1576, 1677
SfcI	CTRYAG	4 cut(s)	693, 1178, 1263, 1785
SinI	GGWCC	1 cut(s)	128
SmiI	ATTTAAAT	1 cut(s)	315
SmiMI	CAYNNNNRTG	2 cut(s)	315, 1895
SseBI	AGGCCT	1 cut(s)	1082
SsiI	CCGC	7 cut(s)	142, 537, 1506, 1861, 1930, 2017, 2121
SspMI	CTAG	7 cut(s)	107, 227, 300, 402, 959, 1703, 2124
StuI	AGGCCT	1 cut(s)	1082
StyD4I	CCNGG	5 cut(s)	424, 1821, 1863, 1877, 1995
StyI	CCWWGG	6 cut(s)	159, 1083, 1125, 1579, 1614, 1764
SwaI	ATTTAAAT	1 cut(s)	315
TaaI	ACNGT	4 cut(s)	177, 690, 1718, 1737
TaiI	ACGT	2 cut(s)	1573, 1687
TaqI	TCGA	3 cut(s)	49, 1107, 2141
TatI	WGTACW	1 cut(s)	1737
TauI	GCSGC	1 cut(s)	539
TfiI	GAWTC	7 cut(s)	239, 281, 491, 1193, 1534, 1543, 1982
Tru1I	TTAA	7 cut(s)	258, 314, 363, 569, 855, 1137, 1466
Tru9I	TTAA	7 cut(s)	258, 314, 363, 569, 855, 1137, 1466
TscAI	CASTG	4 cut(s)	445, 877, 1777, 1897
TseFI	GTSAC	1 cut(s)	1051
Tsp45I	GTSAC	1 cut(s)	1051
TspDTI	ATGAA	6 cut(s)	201, 299, 612, 909, 1673, 1913
TspGWI	ACGGA	3 cut(s)	461, 1235, 1285
TspRI	CASTG	4 cut(s)	445, 877, 1777, 1897
Van91I	CCANNNNNTGG	1 cut(s)	431
Vha464I	CTTAAG	1 cut(s)	1136
VneI	GTGCAC	1 cut(s)	1572
VpaK11BI	GGWCC	1 cut(s)	128
VspI	ATTAAT	1 cut(s)	258
XapI	RAATTY	2 cut(s)	1096, 2006
XbaI	TCTAGA	1 cut(s)	226
XceI	RCATGY	1 cut(s)	251
XspI	CTAG	7 cut(s)	107, 227, 300, 402, 959, 1703, 2124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.