Rw3G014130

Ubiquitin-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0017475
Physical Location & Seq
Reverse (-)
14034378 .. 14051376
16999 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G014130.1

Sequence Viewer

Length: 1536 bp
ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAAAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGTACCCTCGCCGGAAAGCAGCTCGAGGTACAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGAGGCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCTACTCTCCACCTGGTCCTCCGTCTCAGGGGAGGCATGCAGATCTTCGTCAAAACTCTCACCGGCAAGACGATCACTCTCGAGGTTGAGAGTTCCGACACCATCGATAACGTCAAGGCTAAAATCCAGGACAAGGAAGGAATTCCCCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCAGGACCCTCGCCGATTACAACATCCAGAAGGAGTCGACTCTCCATCTGGTGCTGCGTCTCCGGGGAGGTATGCAGATCTTTGTAAAAACCCTAACCGGCAAGACAATCACTCTCGAGGTCGAGAGCTCCGATACGATCGACAACGTCAAGGCAAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGTCGGACCTTGGCTGATTACAATATCCAGAAGGAATCCACTTTGCACTTGGTTCTAAGGCTGAGGGGTGGTATGCAAATCTTTGTGAAGACTCTGACAGGAAAGACGATCACTCTGGAGGTGGAGAGCTCCGATACGATTGACAACGTCAAGGCGAAAATTCAAGACAAGGAGGGGATTCCACCGGACCAGCAGAGGCTCATATTCGCTGGGAAGCAATTGGAGGATGGCCGGACTCTAGCGGATTATAATATTCAGAAGGAGAGTACTCTGCATCTTGTGCTCAGGCTTCGTGGTGGGATGCAGATCTTCGTGAAGACTCTGACGGGGAAGACGATCACGCTTGAGGTGGAGAGTTCTGATACTATTGACAATGTCAAAGCAAAGATTCAAGACAAGGAGGGAATCCCACCGGACCAGCAGAGGTTGATCTTTGCTGGAAAGCAATTGGAGGACGGTCGCACATTGGCGGATTATAATATTCAGAAGGAGTCTACACTCCACCTTATCTTTGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCTGACACGATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGAATCCCGCCAGACCAGCAGAGGCTCATCTTCGCAGGAAAGCAGCTCGAGGATGGCCGAACTTTGGCTGATTATAATATTCAGAAGGAATCTACACTCCACCTTGTCCTTCGTCTCCGCGGTGGTGATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03320 map03320
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

511

Amino Acids

57.14

Weight (kDa)

6.04

Isoelectric Point (pI)

27.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad60-SLD PF11976 1 - 58 2.7e-11 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 3 - 57 2.4e-22 Ubiquitin family
Rad60-SLD PF11976 64 - 133 3.3e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 65 - 136 1.7e-31 Ubiquitin family
Rad60-SLD PF11976 139 - 209 1.3e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 141 - 212 1.7e-31 Ubiquitin family
Rad60-SLD PF11976 215 - 285 1.3e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 217 - 288 1.7e-31 Ubiquitin family
Rad60-SLD PF11976 291 - 361 1.3e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 293 - 364 1.7e-31 Ubiquitin family
Rad60-SLD PF11976 367 - 436 4e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 369 - 435 2.2e-29 Ubiquitin family
ubiquitin PF00240 436 - 507 1.7e-31 Ubiquitin family
Rad60-SLD PF11976 436 - 504 1e-15 Ubiquitin-2 like Rad60 SUMO-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017475)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G05320 AT4G05320 AT4G05320
fragaria_vesca FvH4_3g21751 FvH4_3g21751 FvH4_3g21853
malus_domestica MD03G1211300.v1.1
prunus_persica Prupe.4G025900_v2.0.a1 Prupe.4G025900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0003941
rosa_samantha Rh5AG255500
rosa_wichuraiana Rw3G014130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1047, 1275, 1476
AbsI CCTCGAGG 3 cut(s) 44, 230, 1343
AccI GTMKAC 3 cut(s) 380, 608, 1292
AccII CGCG 1 cut(s) 1521
AccIII TCCGGA 2 cut(s) 112, 298
AciI CCGC 6 cut(s) 346, 1040, 1268, 1409, 1519, 1521
AclWI GGATC 4 cut(s) 82, 268, 724, 1381
AcoI YGGCCR 4 cut(s) 157, 343, 1027, 1456
AcsI RAATTY 3 cut(s) 519, 747, 957
AfaI GTAC 3 cut(s) 163, 189, 1066
AfiI CCNNNNNNNGG 7 cut(s) 97, 283, 406, 511, 739, 1396, 1465
AgsI TTSAA 2 cut(s) 962, 1190
AjnI CCWGG 5 cut(s) 90, 276, 390, 504, 732
Alw21I GWGCWC 6 cut(s) 59, 245, 701, 929, 1083, 1358
Alw26I GTCTC 3 cut(s) 407, 635, 1520
AlwI GGATC 4 cut(s) 82, 268, 724, 1381
AlwNI CAGNNNCTG 1 cut(s) 541
Ama87I CYCGRG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
Aor13HI TCCGGA 2 cut(s) 112, 298
AoxI GGCC 6 cut(s) 81, 157, 267, 343, 1027, 1456
ApeKI GCWGC 6 cut(s) 145, 178, 331, 625, 787, 1444
ApoI RAATTY 3 cut(s) 519, 747, 957
Asp700I GAANNNNTTC 2 cut(s) 519, 747
AspS9I GGNCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
AsuC2I CCSGG 2 cut(s) 527, 635
AsuHPI GGTGA 5 cut(s) 16, 31, 217, 430, 1330
AvaI CYCGRG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
AvaII GGWCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
BaeI ACNNNNGTAYC 2 cut(s) 145, 178
BanII GRGCYC 5 cut(s) 59, 245, 701, 929, 1358
BbsI GAAGAC 4 cut(s) 573, 893, 1121, 1136
Bbv12I GWGCWC 6 cut(s) 59, 245, 701, 929, 1083, 1358
BbvCI CCTCAGC 1 cut(s) 860
BbvI GCAGC 6 cut(s) 157, 190, 343, 612, 799, 1456
BccI CCATC 9 cut(s) 44, 74, 230, 260, 488, 624, 1019, 1343, 1448
BceAI ACGGC 4 cut(s) 144, 172, 358, 586
BcgI CGANNNNNNTGC 2 cut(s) 562, 596
BciT130I CCWGG 5 cut(s) 92, 278, 392, 506, 734
BcnI CCSGG 2 cut(s) 527, 635
BcoDI GTCTC 3 cut(s) 407, 635, 1520
BfaI CTAG 1 cut(s) 1037
BglII AGATCT 5 cut(s) 6, 192, 420, 648, 1104
BisI GCNGC 7 cut(s) 146, 179, 332, 346, 626, 788, 1445
BlsI GCNGC 7 cut(s) 147, 180, 333, 347, 627, 789, 1446
BmcAI AGTACT 1 cut(s) 1066
Bme1390I CCNGG 7 cut(s) 92, 278, 392, 506, 527, 635, 734
Bme18I GGWCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
BmeT110I CYCGRG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
BmgT120I GGNCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
BmiI GGNNCC 1 cut(s) 578
BmrFI CCNGG 7 cut(s) 92, 278, 392, 506, 527, 635, 734
BmsI GCATC 4 cut(s) 114, 300, 1081, 1089
BpiI GAAGAC 4 cut(s) 573, 893, 1121, 1136
BpmI CTGGAG 2 cut(s) 812, 935
Bpu10I CCTNAGC 2 cut(s) 860, 1082
BpuEI CTTGAG 1 cut(s) 1163
BpuMI CCSGG 2 cut(s) 527, 635
Bsa29I ATCGAT 1 cut(s) 483
BsaBI GATNNNNATC 1 cut(s) 1103
BsaJI CCNNGG 4 cut(s) 525, 634, 807, 1519
BsaWI WCCGGW 4 cut(s) 112, 298, 982, 1210
Bsc4I CCNNNNNNNGG 7 cut(s) 97, 283, 406, 511, 739, 1396, 1465
Bse118I RCCGGY 6 cut(s) 26, 212, 323, 440, 668, 1325
Bse8I GATNNNNATC 1 cut(s) 1103
BseAI TCCGGA 2 cut(s) 112, 298
BseBI CCWGG 5 cut(s) 92, 278, 392, 506, 734
BseCI ATCGAT 1 cut(s) 483
BseDI CCNNGG 4 cut(s) 525, 634, 807, 1519
BseGI GGATG 7 cut(s) 105, 291, 366, 594, 1030, 1104, 1459
BseJI GATNNNNATC 1 cut(s) 1103
BseLI CCNNNNNNNGG 7 cut(s) 97, 283, 406, 511, 739, 1396, 1465
BseMII CTCAG 3 cut(s) 418, 851, 1096
BseX3I CGGCCG 2 cut(s) 157, 343
BseXI GCAGC 6 cut(s) 157, 190, 343, 612, 799, 1456
BseYI CCCAGC 1 cut(s) 1007
Bsh1236I CGCG 1 cut(s) 1521
Bsh1285I CGRYCG 6 cut(s) 160, 346, 711, 802, 1258, 1368
BshFI GGCC 6 cut(s) 83, 159, 269, 345, 1029, 1458
BshVI ATCGAT 1 cut(s) 483
BsiEI CGRYCG 6 cut(s) 160, 346, 711, 802, 1258, 1368
BsiHKAI GWGCWC 6 cut(s) 59, 245, 701, 929, 1083, 1358
BsiHKCI CYCGRG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
BslI CCNNNNNNNGG 7 cut(s) 97, 283, 406, 511, 739, 1396, 1465
BsmAI GTCTC 3 cut(s) 407, 635, 1520
BsmBI CGTCTC 3 cut(s) 407, 635, 1520
BsnI GGCC 6 cut(s) 83, 159, 269, 345, 1029, 1458
BsoBI CYCGRG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
Bsp1286I GDGCHC 6 cut(s) 59, 245, 701, 929, 1083, 1358
Bsp13I TCCGGA 2 cut(s) 112, 298
BspACI CCGC 6 cut(s) 346, 1040, 1268, 1409, 1519, 1521
BspANI GGCC 6 cut(s) 83, 159, 269, 345, 1029, 1458
BspCNI CTCAG 3 cut(s) 417, 852, 1095
BspDI ATCGAT 1 cut(s) 483
BspEI TCCGGA 2 cut(s) 112, 298
BspFNI CGCG 1 cut(s) 1521
BspLI GGNNCC 1 cut(s) 578
BspPI GGATC 4 cut(s) 82, 268, 724, 1381
BsrFI RCCGGY 6 cut(s) 26, 212, 323, 440, 668, 1325
BssAI RCCGGY 6 cut(s) 26, 212, 323, 440, 668, 1325
BssECI CCNNGG 4 cut(s) 525, 634, 807, 1519
BssT1I CCWWGG 1 cut(s) 807
Bst2UI CCWGG 5 cut(s) 92, 278, 392, 506, 734
Bst4CI ACNGT 2 cut(s) 800, 1256
BstAPI GCANNNNNTGC 1 cut(s) 1078
BstC8I GCNNGC 1 cut(s) 416
BstDEI CTNAG 4 cut(s) 404, 854, 860, 1082
BstDSI CCRYGG 1 cut(s) 1519
BstF5I GGATG 7 cut(s) 105, 291, 366, 594, 1030, 1104, 1459
BstFNI CGCG 1 cut(s) 1521
BstMAI GTCTC 3 cut(s) 407, 635, 1520
BstMCI CGRYCG 6 cut(s) 160, 346, 711, 802, 1258, 1368
BstMWI GCNNNNNNNGC 2 cut(s) 1078, 1417
BstNI CCWGG 5 cut(s) 92, 278, 392, 506, 734
BstNSI RCATGY 1 cut(s) 418
BstSCI CCNGG 7 cut(s) 90, 276, 390, 504, 525, 633, 732
BstUI CGCG 1 cut(s) 1521
BstV1I GCAGC 6 cut(s) 157, 190, 343, 612, 799, 1456
BstV2I GAAGAC 4 cut(s) 573, 893, 1121, 1136
BstX2I RGATCY 9 cut(s) 6, 87, 192, 273, 420, 648, 729, 1104, 1386
BstYI RGATCY 9 cut(s) 6, 87, 192, 273, 420, 648, 729, 1104, 1386
BstZI CGGCCG 2 cut(s) 157, 343
Bsu15I ATCGAT 1 cut(s) 483
BsuRI GGCC 6 cut(s) 83, 159, 269, 345, 1029, 1458
BsuTUI ATCGAT 1 cut(s) 483
BtgI CCRYGG 1 cut(s) 1519
BtsCI GGATG 7 cut(s) 105, 291, 366, 594, 1030, 1104, 1459
Cac8I GCNNGC 1 cut(s) 416
CaiI CAGNNNCTG 1 cut(s) 541
Cfr10I RCCGGY 6 cut(s) 26, 212, 323, 440, 668, 1325
Cfr13I GGNCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
Cfr42I CCGCGG 1 cut(s) 1522
ClaI ATCGAT 1 cut(s) 483
CseI GACGC 1 cut(s) 617
CsiI ACCWGGT 1 cut(s) 390
Csp6I GTAC 3 cut(s) 162, 188, 1065
CviAII CATG 1 cut(s) 415
CviQI GTAC 3 cut(s) 162, 188, 1065
DdeI CTNAG 4 cut(s) 404, 854, 860, 1082
EaeI YGGCCR 4 cut(s) 157, 343, 1027, 1456
EagI CGGCCG 2 cut(s) 157, 343
EciI GGCGGA 1 cut(s) 1283
Ecl136II GAGCTC 5 cut(s) 57, 243, 699, 927, 1356
EclXI CGGCCG 2 cut(s) 157, 343
Eco130I CCWWGG 1 cut(s) 807
Eco24I GRGCYC 5 cut(s) 59, 245, 701, 929, 1358
Eco47I GGWCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
Eco52I CGGCCG 2 cut(s) 157, 343
Eco53kI GAGCTC 5 cut(s) 57, 243, 699, 927, 1356
Eco88I CYCGRG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
EcoICRI GAGCTC 5 cut(s) 57, 243, 699, 927, 1356
EcoO109I RGGNCCY 1 cut(s) 576
EcoRI GAATTC 2 cut(s) 519, 747
EcoRII CCWGG 5 cut(s) 90, 276, 390, 504, 732
EcoT14I CCWWGG 1 cut(s) 807
EcoT38I GRGCYC 5 cut(s) 59, 245, 701, 929, 1358
ErhI CCWWGG 1 cut(s) 807
Esp3I CGTCTC 3 cut(s) 407, 635, 1520
FaeI CATG 1 cut(s) 418
FaiI YATR 7 cut(s) 416, 644, 872, 1001, 1047, 1275, 1476
FatI CATG 1 cut(s) 414
FauI CCCGC 1 cut(s) 1416
FblI GTMKAC 3 cut(s) 380, 608, 1292
Fnu4HI GCNGC 7 cut(s) 146, 179, 332, 346, 626, 788, 1445
FokI GGATG 7 cut(s) 92, 278, 353, 581, 1037, 1111, 1466
FriOI GRGCYC 5 cut(s) 59, 245, 701, 929, 1358
Fsp4HI GCNGC 7 cut(s) 146, 179, 332, 346, 626, 788, 1445
FspBI CTAG 1 cut(s) 1037
GluI GCNGC 7 cut(s) 146, 179, 332, 346, 626, 788, 1445
GsaI CCCAGC 1 cut(s) 1011
GsuI CTGGAG 2 cut(s) 812, 935
HaeIII GGCC 6 cut(s) 83, 159, 269, 345, 1029, 1458
HgaI GACGC 1 cut(s) 617
Hin1II CATG 1 cut(s) 418
HincII GTYRAC 1 cut(s) 609
HindII GTYRAC 1 cut(s) 609
HphI GGTGA 5 cut(s) 16, 31, 217, 430, 1330
Hpy166II GTNNAC 3 cut(s) 381, 609, 1293
Hpy8I GTNNAC 3 cut(s) 381, 609, 1293
HpyAV CCTTC 9 cut(s) 367, 509, 595, 737, 823, 1051, 1279, 1480, 1520
HpyCH4III ACNGT 2 cut(s) 800, 1256
HpyCH4IV ACGT 6 cut(s) 75, 261, 489, 717, 945, 1374
HpyCH4V TGCA 7 cut(s) 4, 418, 646, 844, 874, 1072, 1102
HpyF10VI GCNNNNNNNGC 2 cut(s) 1078, 1417
HpyF3I CTNAG 4 cut(s) 404, 854, 860, 1082
HpySE526I ACGT 6 cut(s) 75, 261, 489, 717, 945, 1374
Hsp92II CATG 1 cut(s) 418
Kpn2I TCCGGA 2 cut(s) 112, 298
KspI CCGCGG 1 cut(s) 1522
LmnI GCTCC 3 cut(s) 62, 704, 932
Lsp1109I GCAGC 6 cut(s) 157, 190, 343, 612, 799, 1456
LweI GCATC 4 cut(s) 114, 300, 1081, 1089
MabI ACCWGGT 1 cut(s) 390
MaeI CTAG 1 cut(s) 1037
MaeII ACGT 6 cut(s) 75, 261, 489, 717, 945, 1374
MfeI CAATTG 2 cut(s) 1016, 1244
MflI RGATCY 9 cut(s) 6, 87, 192, 273, 420, 648, 729, 1104, 1386
MhlI GDGCHC 6 cut(s) 59, 245, 701, 929, 1083, 1358
MluCI AATT 5 cut(s) 519, 747, 957, 1016, 1244
MlyI GAGTC 7 cut(s) 386, 604, 614, 883, 1027, 1111, 1298
MmeI TCCRAC 3 cut(s) 84, 498, 782
MroI TCCGGA 2 cut(s) 112, 298
MroXI GAANNNNTTC 2 cut(s) 519, 747
MspA1I CMGCKG 2 cut(s) 790, 1521
MspR9I CCNGG 7 cut(s) 92, 278, 392, 506, 527, 635, 734
MunI CAATTG 2 cut(s) 1016, 1244
MvaI CCWGG 5 cut(s) 92, 278, 392, 506, 734
MvnI CGCG 1 cut(s) 1521
MwoI GCNNNNNNNGC 2 cut(s) 1078, 1417
NciI CCSGG 2 cut(s) 527, 635
NlaIII CATG 1 cut(s) 418
NlaIV GGNNCC 1 cut(s) 578
NspI RCATGY 1 cut(s) 418
PaeI GCATGC 1 cut(s) 418
PaeR7I CTCGAG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
PcsI WCGNNNNNNNCGW 3 cut(s) 57, 699, 1130
PdmI GAANNNNTTC 2 cut(s) 519, 747
PfeI GAWTC 6 cut(s) 833, 976, 1186, 1203, 1404, 1490
PflFI GACNNNGTC 6 cut(s) 74, 260, 716, 944, 1172, 1373
PfoI TCCNGGA 4 cut(s) 90, 276, 504, 732
PkrI GCNGC 7 cut(s) 147, 180, 333, 347, 627, 789, 1446
Ple19I CGATCG 2 cut(s) 711, 1368
PleI GAGTC 7 cut(s) 385, 604, 613, 883, 1027, 1111, 1297
PpsI GAGTC 7 cut(s) 385, 604, 613, 883, 1027, 1111, 1297
PpuMI RGGWCCY 1 cut(s) 576
PsiI TTATAA 3 cut(s) 1047, 1275, 1476
Psp124BI GAGCTC 5 cut(s) 59, 245, 701, 929, 1358
Psp5II RGGWCCY 1 cut(s) 576
Psp6I CCWGG 5 cut(s) 90, 276, 390, 504, 732
PspFI CCCAGC 1 cut(s) 1007
PspGI CCWGG 5 cut(s) 90, 276, 390, 504, 732
PspN4I GGNNCC 1 cut(s) 578
PspPI GGNCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
PspPPI RGGWCCY 1 cut(s) 576
PspXI VCTCGAGB 7 cut(s) 44, 149, 182, 230, 335, 1343, 1448
PstNI CAGNNNCTG 1 cut(s) 541
PsuI RGATCY 9 cut(s) 6, 87, 192, 273, 420, 648, 729, 1104, 1386
PsyI GACNNNGTC 6 cut(s) 74, 260, 716, 944, 1172, 1373
PvuI CGATCG 2 cut(s) 711, 1368
PvuII CAGCTG 1 cut(s) 790
RsaI GTAC 3 cut(s) 163, 189, 1066
RsaNI GTAC 3 cut(s) 162, 188, 1065
SacI GAGCTC 5 cut(s) 59, 245, 701, 929, 1358
SacII CCGCGG 1 cut(s) 1522
SalI GTCGAC 1 cut(s) 607
SatI GCNGC 7 cut(s) 146, 179, 332, 346, 626, 788, 1445
Sau96I GGNCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
ScaI AGTACT 1 cut(s) 1066
SchI GAGTC 7 cut(s) 386, 604, 614, 883, 1027, 1111, 1298
ScrFI CCNGG 7 cut(s) 92, 278, 392, 506, 527, 635, 734
SduI GDGCHC 6 cut(s) 59, 245, 701, 929, 1083, 1358
SexAI ACCWGGT 1 cut(s) 390
SfaNI GCATC 4 cut(s) 114, 300, 1081, 1089
Sfr274I CTCGAG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
Sfr303I CCGCGG 1 cut(s) 1522
SgrBI CCGCGG 1 cut(s) 1522
SinI GGWCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
SlaI CTCGAG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
SphI GCATGC 1 cut(s) 418
Sse9I AATT 5 cut(s) 519, 747, 957, 1016, 1244
SsiI CCGC 6 cut(s) 346, 1040, 1268, 1409, 1519, 1521
SspI AATATT 3 cut(s) 1051, 1279, 1480
SspMI CTAG 1 cut(s) 1037
SstI GAGCTC 5 cut(s) 59, 245, 701, 929, 1358
StyD4I CCNGG 7 cut(s) 90, 276, 390, 504, 525, 633, 732
StyI CCWWGG 1 cut(s) 807
TaaI ACNGT 2 cut(s) 800, 1256
TaiI ACGT 6 cut(s) 78, 264, 492, 720, 948, 1377
TasI AATT 5 cut(s) 519, 747, 957, 1016, 1244
TatI WGTACW 1 cut(s) 1064
TauI GCSGC 1 cut(s) 348
TfiI GAWTC 6 cut(s) 833, 976, 1186, 1203, 1404, 1490
TseI GCWGC 6 cut(s) 145, 178, 331, 625, 787, 1444
TspGWI ACGGA 1 cut(s) 389
Tth111I GACNNNGTC 6 cut(s) 74, 260, 716, 944, 1172, 1373
VpaK11BI GGWCC 8 cut(s) 115, 301, 394, 529, 576, 804, 985, 1213
XapI RAATTY 3 cut(s) 519, 747, 957
XceI RCATGY 1 cut(s) 418
XcmI CCANNNNNNNNNTGG 1 cut(s) 844
XhoI CTCGAG 9 cut(s) 44, 149, 182, 230, 335, 458, 686, 1343, 1448
XmiI GTMKAC 3 cut(s) 380, 608, 1292
XmnI GAANNNNTTC 2 cut(s) 519, 747
XspI CTAG 1 cut(s) 1037
ZrmI AGTACT 1 cut(s) 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.