DNA repair protein RAD50
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G31970 |
| fragaria_vesca | FvH4_4g13300 |
| malus_domestica | MD05G1230300.v1.1 |
| prunus_persica | Prupe.1G165000_v2.0.a1 Prupe.1G165000_v2.0.a1 Prupe.1G165000_v2.0.a1 Prupe.1G165000_v2.0.a1 Prupe.1G165000_v2.0.a1 |
| pyrus_communis | pycom04g01350 |
| rosa_chinensis | RchiOBHm_Chr4g0413591 |
| rosa_laevigata | RLG00000008210 |
| rosa_multiflora | Rmu_sc0014097.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00357470 |
| rosa_rugosa | Rorug04G0121100 |
| rosa_samantha | Rh4AG180900 Rh4BG180100 Rh4CG192000 Rh4DG176200 |
| rosa_wichuraiana | Rw4G015110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1533 |
| AciI | CCGC | 1 cut(s) | 862 |
| AclI | AACGTT | 1 cut(s) | 852 |
| AclWI | GGATC | 2 cut(s) | 266, 729 |
| AcoI | YGGCCR | 1 cut(s) | 2086 |
| AcsI | RAATTY | 2 cut(s) | 1254, 1406 |
| AcuI | CTGAAG | 2 cut(s) | 131, 1374 |
| AfaI | GTAC | 2 cut(s) | 830, 1580 |
| AfeI | AGCGCT | 1 cut(s) | 2069 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1078 |
| AjnI | CCWGG | 3 cut(s) | 724, 1629, 2157 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 335, 367 |
| AlwI | GGATC | 2 cut(s) | 266, 729 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1192, 1775 |
| Aor51HI | AGCGCT | 1 cut(s) | 2069 |
| AoxI | GGCC | 5 cut(s) | 150, 621, 722, 1003, 2086 |
| ApeKI | GCWGC | 4 cut(s) | 377, 1723, 1991, 1994 |
| ApoI | RAATTY | 2 cut(s) | 1254, 1406 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 984, 1128 |
| AspLEI | GCGC | 5 cut(s) | 23, 1651, 1671, 2070, 2094 |
| AspS9I | GGNCC | 6 cut(s) | 722, 1004, 1627, 1873, 1970, 2017 |
| AsuHPI | GGTGA | 5 cut(s) | 61, 809, 851, 2126, 2131 |
| AvaII | GGWCC | 4 cut(s) | 1627, 1873, 1970, 2017 |
| BaeGI | GKGCMC | 1 cut(s) | 298 |
| BalI | TGGCCA | 1 cut(s) | 2088 |
| BauI | CACGAG | 2 cut(s) | 30, 291 |
| BbsI | GAAGAC | 1 cut(s) | 351 |
| BbvI | GCAGC | 4 cut(s) | 389, 1735, 1978, 1981 |
| BccI | CCATC | 5 cut(s) | 245, 306, 538, 1609, 1681 |
| BciT130I | CCWGG | 3 cut(s) | 726, 1631, 2159 |
| BclI | TGATCA | 2 cut(s) | 1585, 1887 |
| BfaI | CTAG | 6 cut(s) | 141, 803, 1242, 1838, 1937, 1943 |
| BfoI | RGCGCY | 3 cut(s) | 24, 2071, 2095 |
| BglII | AGATCT | 1 cut(s) | 109 |
| BisI | GCNGC | 4 cut(s) | 378, 1724, 1992, 1995 |
| BlsI | GCNGC | 4 cut(s) | 379, 1725, 1993, 1996 |
| Bme1390I | CCNGG | 3 cut(s) | 726, 1631, 2159 |
| Bme18I | GGWCC | 4 cut(s) | 1627, 1873, 1970, 2017 |
| BmgT120I | GGNCC | 6 cut(s) | 722, 1004, 1627, 1873, 1970, 2017 |
| BmrFI | CCNGG | 3 cut(s) | 726, 1631, 2159 |
| BmsI | GCATC | 2 cut(s) | 1312, 1656 |
| BpiI | GAAGAC | 1 cut(s) | 351 |
| BpmI | CTGGAG | 1 cut(s) | 318 |
| BpuEI | CTTGAG | 4 cut(s) | 37, 406, 576, 1356 |
| BsaJI | CCNNGG | 3 cut(s) | 624, 738, 2157 |
| BsaWI | WCCGGW | 1 cut(s) | 2019 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1078 |
| Bse1I | ACTGG | 2 cut(s) | 1072, 1828 |
| Bse3DI | GCAATG | 1 cut(s) | 170 |
| BseBI | CCWGG | 3 cut(s) | 726, 1631, 2159 |
| BseDI | CCNNGG | 3 cut(s) | 624, 738, 2157 |
| BseGI | GGATG | 1 cut(s) | 691 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1078 |
| BseMI | GCAATG | 1 cut(s) | 170 |
| BseMII | CTCAG | 4 cut(s) | 381, 519, 1602, 1971 |
| BseNI | ACTGG | 2 cut(s) | 1072, 1828 |
| BseRI | GAGGAG | 2 cut(s) | 139, 1094 |
| BseSI | GKGCMC | 1 cut(s) | 298 |
| BseXI | GCAGC | 4 cut(s) | 389, 1735, 1978, 1981 |
| BseYI | CCCAGC | 1 cut(s) | 1784 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1069 |
| BshFI | GGCC | 5 cut(s) | 152, 623, 724, 1005, 2088 |
| BsiEI | CGRYCG | 1 cut(s) | 1069 |
| BsiSI | CCGG | 1 cut(s) | 2020 |
| BslFI | GGGAC | 1 cut(s) | 1801 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1078 |
| BsmFI | GGGAC | 1 cut(s) | 1801 |
| BsmI | GAATGC | 1 cut(s) | 1251 |
| BsnI | GGCC | 5 cut(s) | 152, 623, 724, 1005, 2088 |
| Bsp1286I | GDGCHC | 1 cut(s) | 298 |
| BspACI | CCGC | 1 cut(s) | 862 |
| BspANI | GGCC | 5 cut(s) | 152, 623, 724, 1005, 2088 |
| BspCNI | CTCAG | 4 cut(s) | 382, 520, 1603, 1972 |
| BspHI | TCATGA | 1 cut(s) | 2059 |
| BspPI | GGATC | 2 cut(s) | 266, 729 |
| BsrDI | GCAATG | 1 cut(s) | 170 |
| BsrI | ACTGG | 2 cut(s) | 1072, 1828 |
| BssECI | CCNNGG | 3 cut(s) | 624, 738, 2157 |
| BssSI | CACGAG | 2 cut(s) | 30, 291 |
| BssT1I | CCWWGG | 2 cut(s) | 624, 738 |
| Bst2BI | CACGAG | 2 cut(s) | 30, 291 |
| Bst2UI | CCWGG | 3 cut(s) | 726, 1631, 2159 |
| Bst4CI | ACNGT | 4 cut(s) | 104, 175, 872, 1578 |
| Bst6I | CTCTTC | 4 cut(s) | 333, 534, 876, 927 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1192 |
| BstC8I | GCNNGC | 4 cut(s) | 1086, 2090, 2096, 2100 |
| BstDEI | CTNAG | 8 cut(s) | 154, 390, 409, 528, 533, 1307, 1611, 1980 |
| BstF5I | GGATG | 1 cut(s) | 691 |
| BstH2I | RGCGCY | 3 cut(s) | 24, 2071, 2095 |
| BstHHI | GCGC | 5 cut(s) | 23, 1651, 1671, 2070, 2094 |
| BstMCI | CGRYCG | 1 cut(s) | 1069 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 587, 1192, 1201, 1453, 1597 |
| BstNI | CCWGG | 3 cut(s) | 726, 1631, 2159 |
| BstNSI | RCATGY | 1 cut(s) | 2102 |
| BstSCI | CCNGG | 3 cut(s) | 724, 1629, 2157 |
| BstSLI | GKGCMC | 1 cut(s) | 298 |
| BstV1I | GCAGC | 4 cut(s) | 389, 1735, 1978, 1981 |
| BstV2I | GAAGAC | 1 cut(s) | 351 |
| BstX2I | RGATCY | 2 cut(s) | 109, 734 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 196 |
| BstYI | RGATCY | 2 cut(s) | 109, 734 |
| BsuRI | GGCC | 5 cut(s) | 152, 623, 724, 1005, 2088 |
| BtsCI | GGATG | 1 cut(s) | 691 |
| BtsIMutI | CAGTG | 3 cut(s) | 877, 1079, 1661 |
| Cac8I | GCNNGC | 4 cut(s) | 1086, 2090, 2096, 2100 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1192, 1775 |
| CciI | TCATGA | 1 cut(s) | 2059 |
| CfoI | GCGC | 5 cut(s) | 23, 1651, 1671, 2070, 2094 |
| Cfr13I | GGNCC | 6 cut(s) | 722, 1004, 1627, 1873, 1970, 2017 |
| Csp6I | GTAC | 2 cut(s) | 829, 1579 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 845, 880, 1474, 1509 |
| CviAII | CATG | 5 cut(s) | 794, 832, 1816, 2060, 2099 |
| CviQI | GTAC | 2 cut(s) | 829, 1579 |
| DdeI | CTNAG | 8 cut(s) | 154, 390, 409, 528, 533, 1307, 1611, 1980 |
| EaeI | YGGCCR | 1 cut(s) | 2086 |
| Eam1104I | CTCTTC | 4 cut(s) | 333, 534, 876, 927 |
| EarI | CTCTTC | 4 cut(s) | 333, 534, 876, 927 |
| Eco130I | CCWWGG | 2 cut(s) | 624, 738 |
| Eco147I | AGGCCT | 2 cut(s) | 152, 623 |
| Eco47I | GGWCC | 4 cut(s) | 1627, 1873, 1970, 2017 |
| Eco47III | AGCGCT | 1 cut(s) | 2069 |
| Eco57I | CTGAAG | 2 cut(s) | 131, 1374 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1627, 1873 |
| EcoRII | CCWGG | 3 cut(s) | 724, 1629, 2157 |
| EcoT14I | CCWWGG | 2 cut(s) | 624, 738 |
| ErhI | CCWWGG | 2 cut(s) | 624, 738 |
| FaeI | CATG | 5 cut(s) | 797, 835, 1819, 2063, 2102 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 446, 478, 1885, 1917 |
| FaqI | GGGAC | 1 cut(s) | 1801 |
| FatI | CATG | 5 cut(s) | 793, 831, 1815, 2059, 2098 |
| FbaI | TGATCA | 2 cut(s) | 1585, 1887 |
| Fnu4HI | GCNGC | 4 cut(s) | 378, 1724, 1992, 1995 |
| FokI | GGATG | 1 cut(s) | 698 |
| Fsp4HI | GCNGC | 4 cut(s) | 378, 1724, 1992, 1995 |
| FspBI | CTAG | 6 cut(s) | 141, 803, 1242, 1838, 1937, 1943 |
| GlaI | GCGC | 5 cut(s) | 22, 1650, 1670, 2069, 2093 |
| GluI | GCNGC | 4 cut(s) | 378, 1724, 1992, 1995 |
| GsaI | CCCAGC | 1 cut(s) | 1788 |
| GsuI | CTGGAG | 1 cut(s) | 318 |
| HaeII | RGCGCY | 3 cut(s) | 24, 2071, 2095 |
| HaeIII | GGCC | 5 cut(s) | 152, 623, 724, 1005, 2088 |
| HapII | CCGG | 1 cut(s) | 2020 |
| HhaI | GCGC | 5 cut(s) | 23, 1651, 1671, 2070, 2094 |
| Hin1II | CATG | 5 cut(s) | 797, 835, 1819, 2063, 2102 |
| Hin6I | GCGC | 5 cut(s) | 21, 1649, 1669, 2068, 2092 |
| HinP1I | GCGC | 5 cut(s) | 21, 1649, 1669, 2068, 2092 |
| HincII | GTYRAC | 1 cut(s) | 691 |
| HindII | GTYRAC | 1 cut(s) | 691 |
| HindIII | AAGCTT | 3 cut(s) | 455, 707, 983 |
| HpaII | CCGG | 1 cut(s) | 2020 |
| HphI | GGTGA | 5 cut(s) | 61, 809, 851, 2126, 2131 |
| Hpy166II | GTNNAC | 6 cut(s) | 98, 320, 451, 691, 800, 1510 |
| Hpy188III | TCNNGA | 9 cut(s) | 32, 113, 335, 662, 911, 974, 1298, 1373, 2060 |
| Hpy8I | GTNNAC | 6 cut(s) | 98, 320, 451, 691, 800, 1510 |
| Hpy99I | CGWCG | 1 cut(s) | 956 |
| HpyAV | CCTTC | 5 cut(s) | 202, 367, 676, 830, 1864 |
| HpyCH4III | ACNGT | 4 cut(s) | 104, 175, 872, 1578 |
| HpyCH4IV | ACGT | 2 cut(s) | 852, 1207 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 587, 1192, 1201, 1453, 1597 |
| HpyF3I | CTNAG | 8 cut(s) | 154, 390, 409, 528, 533, 1307, 1611, 1980 |
| HpySE526I | ACGT | 2 cut(s) | 852, 1207 |
| Hsp92II | CATG | 5 cut(s) | 797, 835, 1819, 2063, 2102 |
| HspAI | GCGC | 5 cut(s) | 21, 1649, 1669, 2068, 2092 |
| Ksp22I | TGATCA | 2 cut(s) | 1585, 1887 |
| LmnI | GCTCC | 1 cut(s) | 1081 |
| Lsp1109I | GCAGC | 4 cut(s) | 389, 1735, 1978, 1981 |
| LweI | GCATC | 2 cut(s) | 1312, 1656 |
| MaeI | CTAG | 6 cut(s) | 141, 803, 1242, 1838, 1937, 1943 |
| MaeII | ACGT | 2 cut(s) | 852, 1207 |
| MaeIII | GTNAC | 1 cut(s) | 2119 |
| MfeI | CAATTG | 1 cut(s) | 1924 |
| MflI | RGATCY | 2 cut(s) | 109, 734 |
| MhlI | GDGCHC | 1 cut(s) | 298 |
| MlsI | TGGCCA | 1 cut(s) | 2088 |
| MluNI | TGGCCA | 1 cut(s) | 2088 |
| MlyI | GAGTC | 4 cut(s) | 425, 970, 1783, 1993 |
| Mox20I | TGGCCA | 1 cut(s) | 2088 |
| MroXI | GAANNNNTTC | 2 cut(s) | 984, 1128 |
| MscI | TGGCCA | 1 cut(s) | 2088 |
| MslI | CAYNNNNRTG | 1 cut(s) | 902 |
| Msp20I | TGGCCA | 1 cut(s) | 2088 |
| MspI | CCGG | 1 cut(s) | 2020 |
| MspR9I | CCNGG | 3 cut(s) | 726, 1631, 2159 |
| MunI | CAATTG | 1 cut(s) | 1924 |
| Mva1269I | GAATGC | 1 cut(s) | 1251 |
| MvaI | CCWGG | 3 cut(s) | 726, 1631, 2159 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 587, 1192, 1201, 1453, 1597 |
| NlaIII | CATG | 5 cut(s) | 797, 835, 1819, 2063, 2102 |
| NmuCI | GTSAC | 1 cut(s) | 2119 |
| NspI | RCATGY | 1 cut(s) | 2102 |
| PaeI | GCATGC | 1 cut(s) | 2102 |
| PagI | TCATGA | 1 cut(s) | 2059 |
| PceI | AGGCCT | 2 cut(s) | 152, 623 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1386 |
| PctI | GAATGC | 1 cut(s) | 1251 |
| PdmI | GAANNNNTTC | 2 cut(s) | 984, 1128 |
| PfeI | GAWTC | 6 cut(s) | 179, 200, 416, 1217, 1417, 1772 |
| PkrI | GCNGC | 4 cut(s) | 379, 1725, 1993, 1996 |
| PleI | GAGTC | 4 cut(s) | 425, 969, 1783, 1992 |
| PpsI | GAGTC | 4 cut(s) | 425, 969, 1783, 1992 |
| PpuMI | RGGWCCY | 2 cut(s) | 1627, 1873 |
| PsiI | TTATAA | 1 cut(s) | 1533 |
| Psp1406I | AACGTT | 1 cut(s) | 852 |
| Psp5II | RGGWCCY | 2 cut(s) | 1627, 1873 |
| Psp6I | CCWGG | 3 cut(s) | 724, 1629, 2157 |
| PspFI | CCCAGC | 1 cut(s) | 1784 |
| PspGI | CCWGG | 3 cut(s) | 724, 1629, 2157 |
| PspPI | GGNCC | 6 cut(s) | 722, 1004, 1627, 1873, 1970, 2017 |
| PspPPI | RGGWCCY | 2 cut(s) | 1627, 1873 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1192, 1775 |
| PsuI | RGATCY | 2 cut(s) | 109, 734 |
| RsaI | GTAC | 2 cut(s) | 830, 1580 |
| RsaNI | GTAC | 2 cut(s) | 829, 1579 |
| RseI | CAYNNNNRTG | 1 cut(s) | 902 |
| SatI | GCNGC | 4 cut(s) | 378, 1724, 1992, 1995 |
| Sau96I | GGNCC | 6 cut(s) | 722, 1004, 1627, 1873, 1970, 2017 |
| SchI | GAGTC | 4 cut(s) | 425, 970, 1783, 1993 |
| ScrFI | CCNGG | 3 cut(s) | 726, 1631, 2159 |
| SduI | GDGCHC | 1 cut(s) | 298 |
| SfaNI | GCATC | 2 cut(s) | 1312, 1656 |
| SinI | GGWCC | 4 cut(s) | 1627, 1873, 1970, 2017 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 902 |
| SmlI | CTYRAG | 4 cut(s) | 16, 421, 591, 1371 |
| SmoI | CTYRAG | 4 cut(s) | 16, 421, 591, 1371 |
| SphI | GCATGC | 1 cut(s) | 2102 |
| SseBI | AGGCCT | 2 cut(s) | 152, 623 |
| SsiI | CCGC | 1 cut(s) | 862 |
| SspI | AATATT | 2 cut(s) | 1522, 2111 |
| SspMI | CTAG | 6 cut(s) | 141, 803, 1242, 1838, 1937, 1943 |
| StuI | AGGCCT | 2 cut(s) | 152, 623 |
| StyD4I | CCNGG | 3 cut(s) | 724, 1629, 2157 |
| StyI | CCWWGG | 2 cut(s) | 624, 738 |
| TaaI | ACNGT | 4 cut(s) | 104, 175, 872, 1578 |
| TaiI | ACGT | 2 cut(s) | 855, 1210 |
| TaqI | TCGA | 2 cut(s) | 1389, 1679 |
| TaqII | GACCGA | 2 cut(s) | 965, 1055 |
| TfiI | GAWTC | 6 cut(s) | 179, 200, 416, 1217, 1417, 1772 |
| TscAI | CASTG | 3 cut(s) | 877, 1079, 1668 |
| TseFI | GTSAC | 1 cut(s) | 2119 |
| TseI | GCWGC | 4 cut(s) | 377, 1723, 1991, 1994 |
| Tsp45I | GTSAC | 1 cut(s) | 2119 |
| TspDTI | ATGAA | 9 cut(s) | 80, 486, 993, 1062, 1137, 1278, 1697, 1785, 1962 |
| TspGWI | ACGGA | 1 cut(s) | 1983 |
| TspRI | CASTG | 3 cut(s) | 877, 1079, 1668 |
| VpaK11BI | GGWCC | 4 cut(s) | 1627, 1873, 1970, 2017 |
| XapI | RAATTY | 2 cut(s) | 1254, 1406 |
| XceI | RCATGY | 1 cut(s) | 2102 |
| XmnI | GAANNNNTTC | 2 cut(s) | 984, 1128 |
| XspI | CTAG | 6 cut(s) | 141, 803, 1242, 1838, 1937, 1943 |