AT-hook motif nuclear-localized protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00200 AT4G00200 |
| rosa_chinensis | RchiOBHm_Chr4g0437561 |
| rosa_roxburghii | Rroxscaffold_2G00091570 |
| rosa_rugosa | Rorug01G0356200 Rorug02G0061400 |
| rosa_samantha | Rh1DG306100 Rh2AG329400 Rh6DG240300 |
| rosa_wichuraiana | Rw5G036080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 46 |
| AciI | CCGC | 1 cut(s) | 169 |
| AclWI | GGATC | 1 cut(s) | 37 |
| AcsI | RAATTY | 3 cut(s) | 228, 280, 289 |
| AfaI | GTAC | 1 cut(s) | 97 |
| AlwI | GGATC | 1 cut(s) | 37 |
| Ama87I | CYCGRG | 1 cut(s) | 33 |
| ApoI | RAATTY | 3 cut(s) | 228, 280, 289 |
| AspS9I | GGNCC | 1 cut(s) | 63 |
| AvaI | CYCGRG | 1 cut(s) | 33 |
| AvaII | GGWCC | 1 cut(s) | 63 |
| BbsI | GAAGAC | 1 cut(s) | 165 |
| BfaI | CTAG | 2 cut(s) | 146, 304 |
| BmcAI | AGTACT | 1 cut(s) | 97 |
| Bme18I | GGWCC | 1 cut(s) | 63 |
| BmeT110I | CYCGRG | 1 cut(s) | 33 |
| BmgT120I | GGNCC | 1 cut(s) | 63 |
| BmrI | ACTGGG | 1 cut(s) | 87 |
| BmuI | ACTGGG | 1 cut(s) | 87 |
| BpiI | GAAGAC | 1 cut(s) | 165 |
| BsaJI | CCNNGG | 1 cut(s) | 136 |
| Bse1I | ACTGG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 136 |
| BseNI | ACTGG | 1 cut(s) | 93 |
| BsiHKCI | CYCGRG | 1 cut(s) | 33 |
| BsoBI | CYCGRG | 1 cut(s) | 33 |
| Bsp143I | GATC | 2 cut(s) | 29, 208 |
| BspACI | CCGC | 1 cut(s) | 169 |
| BspHI | TCATGA | 1 cut(s) | 211 |
| BspPI | GGATC | 1 cut(s) | 37 |
| BsrI | ACTGG | 1 cut(s) | 93 |
| BssECI | CCNNGG | 1 cut(s) | 136 |
| BssMI | GATC | 2 cut(s) | 29, 208 |
| BssNAI | GTATAC | 1 cut(s) | 47 |
| BssT1I | CCWWGG | 1 cut(s) | 136 |
| Bst1107I | GTATAC | 1 cut(s) | 47 |
| Bst6I | CTCTTC | 1 cut(s) | 254 |
| BstKTI | GATC | 2 cut(s) | 32, 211 |
| BstMBI | GATC | 2 cut(s) | 29, 208 |
| BstV2I | GAAGAC | 1 cut(s) | 165 |
| BstX2I | RGATCY | 1 cut(s) | 29 |
| BstYI | RGATCY | 1 cut(s) | 29 |
| BstZ17I | GTATAC | 1 cut(s) | 47 |
| CciI | TCATGA | 1 cut(s) | 211 |
| Cfr13I | GGNCC | 1 cut(s) | 63 |
| Csp6I | GTAC | 1 cut(s) | 96 |
| CviAII | CATG | 2 cut(s) | 163, 212 |
| CviJI | RGCY | 3 cut(s) | 91, 144, 302 |
| CviKI_1 | RGCY | 3 cut(s) | 91, 144, 302 |
| CviQI | GTAC | 1 cut(s) | 96 |
| DpnI | GATC | 2 cut(s) | 31, 210 |
| DpnII | GATC | 2 cut(s) | 29, 208 |
| Eam1104I | CTCTTC | 1 cut(s) | 254 |
| EarI | CTCTTC | 1 cut(s) | 254 |
| Eco130I | CCWWGG | 1 cut(s) | 136 |
| Eco47I | GGWCC | 1 cut(s) | 63 |
| Eco88I | CYCGRG | 1 cut(s) | 33 |
| EcoT14I | CCWWGG | 1 cut(s) | 136 |
| ErhI | CCWWGG | 1 cut(s) | 136 |
| FaeI | CATG | 2 cut(s) | 166, 215 |
| FaiI | YATR | 9 cut(s) | 11, 47, 68, 118, 155, 164, 186, 213, 254 |
| FatI | CATG | 2 cut(s) | 162, 211 |
| FauI | CCCGC | 1 cut(s) | 162 |
| FblI | GTMKAC | 1 cut(s) | 46 |
| FspBI | CTAG | 2 cut(s) | 146, 304 |
| Hin1II | CATG | 2 cut(s) | 166, 215 |
| Hpy166II | GTNNAC | 1 cut(s) | 47 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| Hpy8I | GTNNAC | 1 cut(s) | 47 |
| HpyCH4V | TGCA | 2 cut(s) | 56, 132 |
| Hsp92II | CATG | 2 cut(s) | 166, 215 |
| Kzo9I | GATC | 2 cut(s) | 29, 208 |
| LpnPI | CCDG | 2 cut(s) | 106, 246 |
| MaeI | CTAG | 2 cut(s) | 146, 304 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MalI | GATC | 2 cut(s) | 31, 210 |
| MboI | GATC | 2 cut(s) | 29, 208 |
| MflI | RGATCY | 1 cut(s) | 29 |
| MluCI | AATT | 3 cut(s) | 228, 280, 289 |
| MnlI | CCTC | 3 cut(s) | 98, 115, 231 |
| MseI | TTAA | 1 cut(s) | 113 |
| NdeII | GATC | 2 cut(s) | 29, 208 |
| NlaIII | CATG | 2 cut(s) | 166, 215 |
| NmuCI | GTSAC | 1 cut(s) | 76 |
| PagI | TCATGA | 1 cut(s) | 211 |
| PspPI | GGNCC | 1 cut(s) | 63 |
| PsuI | RGATCY | 1 cut(s) | 29 |
| RsaI | GTAC | 1 cut(s) | 97 |
| RsaNI | GTAC | 1 cut(s) | 96 |
| SaqAI | TTAA | 1 cut(s) | 113 |
| Sau3AI | GATC | 2 cut(s) | 29, 208 |
| Sau96I | GGNCC | 1 cut(s) | 63 |
| ScaI | AGTACT | 1 cut(s) | 97 |
| SetI | ASST | 2 cut(s) | 109, 126 |
| SinI | GGWCC | 1 cut(s) | 63 |
| Sse9I | AATT | 3 cut(s) | 228, 280, 289 |
| SsiI | CCGC | 1 cut(s) | 169 |
| SspMI | CTAG | 2 cut(s) | 146, 304 |
| StyI | CCWWGG | 1 cut(s) | 136 |
| TasI | AATT | 3 cut(s) | 228, 280, 289 |
| TatI | WGTACW | 1 cut(s) | 95 |
| Tru1I | TTAA | 1 cut(s) | 113 |
| Tru9I | TTAA | 1 cut(s) | 113 |
| TseFI | GTSAC | 1 cut(s) | 76 |
| Tsp45I | GTSAC | 1 cut(s) | 76 |
| TspDTI | ATGAA | 3 cut(s) | 17, 228, 269 |
| VpaK11BI | GGWCC | 1 cut(s) | 63 |
| XapI | RAATTY | 3 cut(s) | 228, 280, 289 |
| XmiI | GTMKAC | 1 cut(s) | 46 |
| XspI | CTAG | 2 cut(s) | 146, 304 |
| ZrmI | AGTACT | 1 cut(s) | 97 |