Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0016695

Physical Location & Seq

Genomic Coordinates Forward (+)

44346964 .. 44350282

Gene Structure 3319 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G022420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2790 bp

ATGAGGATTGCTGAGATATCAACGCCGGAGCTCCGGCAAAGCCACAACGACTCCCCCTCCCAATCGCATCCGCATCAGCATCAGCATCTGATCTCCCAGATCGAATCCTCAATCAAGCAAACCGAGAACCTCTCCCCTGAAAACCTCTTACCTGACACCATTTCCGGCGATCTCCGGCCAGCCTTGACTCAATTGAGCCACCACGCTCCGTTCCCCAACTCTCTGAAGCTCGTGATCTGGAAACTCAGTTATCGCCTCTGGAACGCCTGCGTCGATCTCTCCAACACCACCTCCCTCCGCTCCCTCCCTTCCTCCAAAGCCGAAGAGCACGCCAAGCTCCGCCACATCGCCGCCGACCTACTCTGCGTCGCTGGTGAAGTTTCCGGAGTTCCTTCCCCGGCAATCAAGTCTGCCTCCTTCTACCACAAGACCGGAGTCAAATGGCACGAGCTCCGGAAATTCGACCTCGCTTCGTCGTGCTTCGAGAAAGCGACCGATCTCCTCTCGAAGATCGAAATCAGCACGGTCACCGACTCGGAAGAGAAGAAGCTATTTCTGGATTTGAGTATCGCCAGGTCAAGAACCGCCTGGGAAGTATCGGACCGGAATCTCGCGGTGGCGCTGCTGAACCGGGCCAAGAACTTGCTATTCGGGTCGCCGGATCACTACAAAACCCTAGCCAATCAGTACTCGATCTTCGGAAAGAGCGCGCTGTCCAATAGCGTGAGTATTTCTCTGAACGAAGCATTGAAGCTCATGAACGAGGCTCTGGAGCTATACGAGAACGGATTGCGCGCGGCGAGGACGCGCGACGAGACGGTGGATCTCAAGGCGTTAAGGTCGAAGACGCTCCGGTTCATCTCGGCCGTTCATTTGCAGATGAACGAGTTCGAGAGCGTGATCAAATGCGTGAGGGTGTTGAGAGAGGGCGACGCAGGTGATCAGCACCCTAGCCTTCCGGTGATGGCGATGAAGGCCTGGTTGGGGCTGGGGAAGGACGGCGAGGCCGAGAAGGAGCTCAGGGGCATGGTTGTAAATGAAGGCATTCCTGAGGGCGCTTGGGTGTCGGCGGTGGAGGCCTACTTTGAGTCAGCCGGGACGGCTGGAGCAGAGACGGCGAAGGGAGTGTTTTTGGGGCTGCTTGGGCGGTGCCACGTCAGCGCCAGCGCTGCGGTTAGGGTTTCTCACAGGGTTCTTGGGGAGAGTTACAGCGAGGGATCAAAAGTGAGGGCTAGGGTGGTGTCGGAGCTTGTATCTGATGACAGAGTGGTGGCTCTCTTCTCCGGTGAGGCGGCTGCGAAGCAGAGGACTGCAATGCATTCTGTGCTCTGGAATTGTGCGGCTGATCATTTCCGGCTCAAGGATTATGTAACAAGTGCAGACCTGTTTGAGAAAGCAATGCTTTATATTCCATTCGACATAGAGAATCGAATTCTCCGAGCCAAGGGCTTCAGAGTTTTGTGTCTCTGCCACCTAGGTCTTTCCCACCTTGATCAAGCTCAAGAATACATTAACGAGGCTGAAAAGCTTGAGCCTAACATAGCTTCAGCTTTCCTAAAGTACAAGATTTATCTTCAGAAGAAAGACCAGGATGGGGCTATAACTCAGATTCAGGCAATGACAACCTGCCTTGATTTTACGCCAGACTTTCTCTCCCTTGCAGCCCATGAAGCTGTTGCCTGCCGTACTCTTTCTATTGCTGTTGCTGCTCTATCAAGTCTGCTGAACTTTTATGCCCCAGGAAAATCCATGCCAACAAGTGAAGTCGTAGTTCTGCGCACCTTGGTCACAATCCTTACTCAAGAACCTGGGAATGAGCTTGAAGCCCTCAAGTTTGTTAAGCGGGAGGTTGGAAAACGGGAAAGGAATTGGTTTGCTGTGACTTCATGGAACCTTGGGACGAAAACTGGCACTGAGAAAAATTATGAATTATGTGCCGAATTCTATAGACTGGCATCAGAATTTTATTGTCTTCTGGTTGATGGGCAGGTAGGAGAAAACATGGTCTGCAAAGCACTGATACTGACTATATCTGCAATTATAGCATCAGAAAACCAGAAGAAGACAACATTGCCTGAAAGTGAAGTGAAACAAGCTGTACAGCTTCTAGATAGAGCAGGGAAGATACTGAAGTCAACCTTACCAGGGAAACAACTTAGCGGTGATCCAGTTACCACCATTGAACCTGACCTATACTTCATCTACACCTTTTGTGCCTATGACATATATGGAAGGCTCAATGATTCAGGATTACAGCTACAACTTGTGAAGACTTTTGCTAGTTCAAAGGCCTGCGATCCCAAGTTCCTCCTTCAGATTGGCCTCACAGCTTCACAAGGTCCACAGTCCAATCATGAAGTAGCGACCTTTGCTCTAAATGAATGCCTCTCAGTTTTCCTCTCTTCCTCCTCTCCGGACTACCAAAATGTGGCTCTGATTGTCCGGAAGCTCATTGCTGTGACCAGCATTCACAAAGGTGATACAGATGATGATGCTGTGTATAACATGTACAAGCAAGCTTACAGAATTATGGTAGGACTGAAGGACAGTGAGTATCCGACTGAAGAAGGAAAATGGCTAGCGATGACTGCATGGAATAGGGCATCAGTGCCTGTGAGGCTTGGCCAGATTGATGCGGCAAGGAAATGGATGGATGTCGGTATGCAGCTAGCTAAGCATGTTAATGGAATGGAGACTTATAGGGCGTGCATGGAGGATTTCATTTCCAGCTTTGAGAAGAAATTTGGTGCCCCAAATGATGGCGTAAACAGACCTCAGCTAGTAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006310 GO:0006311 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007140 GO:0007143 GO:0007276 GO:0007292 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032504 GO:0034641 GO:0035822 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045132 GO:0045143 GO:0046483 GO:0048232 GO:0048285 GO:0048609 GO:0051276 GO:0051304 GO:0051307 GO:0051321 GO:0051704 GO:0061982 GO:0070192 GO:0071139 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SPO22

Protein Analysis

929

Amino Acids

102.89

Weight (kDa)

6.68

Isoelectric Point (pI)

43.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPO22	PF08631	195 - 467	1.2e-35	Meiosis protein SPO22/ZIP4 like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016695)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48390
fragaria_vesca	FvH4_2g17460
malus_domestica	MD05G1153500.v1.1
prunus_persica	Prupe.8G186900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0282191
rosa_laevigata	RLG00000012903
rosa_multiflora	Rmu_sc0014549.1_g000008
rosa_roxburghii	Rroxscaffold_7G00186410
rosa_rugosa	Rorug06G0146100
rosa_samantha	Rh6AG259200 Rh6BG262500 Rh6CG261400 Rh6DG253500
rosa_wichuraiana	Rw6G022420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	926
Acc16I	TGCGCA	1 cut(s)	1778
Acc36I	ACCTGC	3 cut(s)	926, 1634, 1978
AccB1I	GGYRCC	2 cut(s)	1149, 2747
AccB7I	CCANNNNNTGG	2 cut(s)	2428, 2759
AccBSI	CCGCTC	1 cut(s)	300
AccII	CGCG	6 cut(s)	614, 710, 795, 797, 808, 810
AccIII	TCCGGA	4 cut(s)	383, 453, 2413, 2442
AclWI	GGATC	5 cut(s)	669, 831, 1225, 2159, 2291
AcoI	YGGCCR	3 cut(s)	176, 864, 2623
AcsI	RAATTY	5 cut(s)	458, 1431, 1940, 1961, 2741
AcuI	CTGAAG	8 cut(s)	245, 1435, 1530, 1559, 2150, 2297, 2561, 2583
AfaI	GTAC	5 cut(s)	689, 1562, 1687, 2100, 2510
AfeI	AGCGCT	1 cut(s)	1168
AfiI	CCNNNNNNNGG	7 cut(s)	984, 1360, 1444, 1594, 2145, 2428, 2759
AflIII	ACRYGT	1 cut(s)	2505
AgsI	TTSAA	4 cut(s)	751, 1823, 2183, 2286
AjiI	CACGTC	1 cut(s)	1156
AjnI	CCWGG	7 cut(s)	572, 587, 977, 1587, 1738, 1807, 2143
AjuI	GAANNNNNNNTTGG	2 cut(s)	965, 997
AleI	CACNNNNGTG	1 cut(s)	2475
Alw21I	GWGCWC	5 cut(s)	33, 330, 453, 1020, 1329
Alw26I	GTCTC	4 cut(s)	809, 1106, 1469, 2687
AlwI	GGATC	5 cut(s)	669, 831, 1225, 2159, 2291
AlwNI	CAGNNNCTG	2 cut(s)	88, 2612
Aor13HI	TCCGGA	4 cut(s)	383, 453, 2413, 2442
Aor51HI	AGCGCT	1 cut(s)	1168
AoxI	GGCC	9 cut(s)	176, 633, 864, 975, 1005, 1077, 2289, 2320, 2623
ApeKI	GCWGC	7 cut(s)	622, 1138, 1169, 1295, 1661, 1706, 2665
ApoI	RAATTY	5 cut(s)	458, 1431, 1940, 1961, 2741
Asp700I	GAANNNNTTC	2 cut(s)	887, 1044
AspA2I	CCTAGG	1 cut(s)	1474
AspS9I	GGNCC	3 cut(s)	601, 633, 2339
AsuC2I	CCSGG	3 cut(s)	398, 632, 1096
AsuHPI	GGTGA	7 cut(s)	386, 520, 950, 973, 1298, 2174, 2489
AsuNHI	GCTAGC	2 cut(s)	2578, 2668
AvaII	GGWCC	2 cut(s)	601, 2339
AvrII	CCTAGG	1 cut(s)	1474
AxyI	CCTNAGG	1 cut(s)	1050
BaeGI	GKGCMC	1 cut(s)	2752
BaeI	ACNNNNGTAYC	2 cut(s)	2117, 2150
BalI	TGGCCA	1 cut(s)	2625
BanI	GGYRCC	2 cut(s)	1149, 2747
BanII	GRGCYC	3 cut(s)	33, 453, 1020
BarI	GAAGNNNNNNTAC	2 cut(s)	680, 712
BauI	CACGAG	2 cut(s)	230, 446
BbsI	GAAGAC	4 cut(s)	851, 1964, 2069, 2276
Bbv12I	GWGCWC	5 cut(s)	33, 330, 453, 1020, 1329
BbvCI	CCTCAGC	1 cut(s)	2775
BbvI	GCAGC	7 cut(s)	609, 1125, 1156, 1282, 1673, 1693, 2677
BccI	CCATC	5 cut(s)	958, 1586, 1976, 2644, 2753
BceAI	ACGGC	5 cut(s)	851, 1015, 1116, 1131, 1668
BciT130I	CCWGG	7 cut(s)	574, 589, 979, 1589, 1740, 1809, 2145
BciVI	GTATCC	1 cut(s)	2565
BclI	TGATCA	4 cut(s)	900, 940, 1345, 1492
BcnI	CCSGG	3 cut(s)	398, 632, 1096
BcoDI	GTCTC	4 cut(s)	809, 1106, 1469, 2687
BfmI	CTRYAG	1 cut(s)	1945
BfoI	RGCGCY	4 cut(s)	623, 1059, 1164, 1170
BfuAI	ACCTGC	3 cut(s)	926, 1634, 1978
BfuI	GTATCC	1 cut(s)	2565
BglI	GCCNNNNNGGC	2 cut(s)	1100, 2617
BlnI	CCTAGG	1 cut(s)	1474
BlpI	GCTNAGC	1 cut(s)	2673
BmcAI	AGTACT	1 cut(s)	689
Bme18I	GGWCC	2 cut(s)	601, 2339
BmgBI	CACGTC	1 cut(s)	1156
BmgT120I	GGNCC	3 cut(s)	601, 633, 2339
BmiI	GGNNCC	3 cut(s)	1151, 1892, 2749
BmsI	GCATC	9 cut(s)	76, 82, 88, 94, 1964, 2054, 2482, 2612, 2623
BmtI	GCTAGC	2 cut(s)	2582, 2672
BoxI	GACNNNNGTC	1 cut(s)	434
BpiI	GAAGAC	4 cut(s)	851, 1964, 2069, 2276
BplI	GAGNNNNNCTC	4 cut(s)	116, 148, 718, 750
BpmI	CTGGAG	2 cut(s)	791, 1125
Bpu10I	CCTNAGC	2 cut(s)	1019, 2775
Bpu1102I	GCTNAGC	1 cut(s)	2673
BpuEI	CTTGAG	6 cut(s)	812, 1343, 1485, 1550, 1785, 1814
BpuMI	CCSGG	3 cut(s)	398, 632, 1096
BsaBI	GATNNNNATC	1 cut(s)	515
BsaJI	CCNNGG	9 cut(s)	396, 588, 1443, 1474, 1738, 1782, 1808, 1894, 2144
BsaWI	WCCGGW	9 cut(s)	383, 431, 453, 603, 852, 958, 1283, 2413, 2442
BsaXI	ACNNNNNCTCC	8 cut(s)	35, 41, 65, 71, 275, 305, 1637, 1667
Bsc4I	CCNNNNNNNGG	7 cut(s)	984, 1360, 1444, 1594, 2145, 2428, 2759
Bse1I	ACTGG	3 cut(s)	1912, 1956, 2168
Bse21I	CCTNAGG	1 cut(s)	1050
Bse3DI	GCAATG	5 cut(s)	1320, 1404, 1623, 2069, 2451
Bse8I	GATNNNNATC	1 cut(s)	515
BseAI	TCCGGA	4 cut(s)	383, 453, 2413, 2442
BseBI	CCWGG	7 cut(s)	574, 589, 979, 1589, 1740, 1809, 2145
BseDI	CCNNGG	9 cut(s)	396, 588, 1443, 1474, 1738, 1782, 1808, 1894, 2144
BseGI	GGATG	4 cut(s)	67, 1597, 2655, 2659
BseJI	GATNNNNATC	1 cut(s)	515
BseLI	CCNNNNNNNGG	7 cut(s)	984, 1360, 1444, 1594, 2145, 2428, 2759
BseMI	GCAATG	5 cut(s)	1320, 1404, 1623, 2069, 2451
BseMII	CTCAG	7 cut(s)	259, 1033, 1041, 1619, 1905, 2403, 2789
BseNI	ACTGG	3 cut(s)	1912, 1956, 2168
BsePI	GCGCGC	2 cut(s)	708, 793
BseRI	GAGGAG	2 cut(s)	491, 2398
BseSI	GKGCMC	1 cut(s)	2752
BseX3I	CGGCCG	1 cut(s)	864
BseXI	GCAGC	7 cut(s)	609, 1125, 1156, 1282, 1673, 1693, 2677
BseYI	CCCAGC	1 cut(s)	988
BsgI	GTGCAG	1 cut(s)	1398
Bsh1236I	CGCG	6 cut(s)	614, 710, 795, 797, 808, 810
Bsh1285I	CGRYCG	2 cut(s)	495, 867
BshFI	GGCC	9 cut(s)	178, 635, 866, 977, 1007, 1079, 2291, 2322, 2625
BshNI	GGYRCC	2 cut(s)	1149, 2747
BsiEI	CGRYCG	2 cut(s)	495, 867
BsiHKAI	GWGCWC	5 cut(s)	33, 330, 453, 1020, 1329
BslFI	GGGAC	2 cut(s)	1111, 1912
BslI	CCNNNNNNNGG	7 cut(s)	984, 1360, 1444, 1594, 2145, 2428, 2759
BsmAI	GTCTC	4 cut(s)	809, 1106, 1469, 2687
BsmBI	CGTCTC	2 cut(s)	809, 1106
BsmFI	GGGAC	2 cut(s)	1111, 1912
BsmI	GAATGC	4 cut(s)	1044, 1318, 2387, 2466
BsnI	GGCC	9 cut(s)	178, 635, 866, 977, 1007, 1079, 2291, 2322, 2625
Bsp1286I	GDGCHC	6 cut(s)	33, 330, 453, 1020, 1329, 2752
Bsp13I	TCCGGA	4 cut(s)	383, 453, 2413, 2442
Bsp1407I	TGTACA	2 cut(s)	2098, 2508
Bsp1720I	GCTNAGC	1 cut(s)	2673
BspANI	GGCC	9 cut(s)	178, 635, 866, 977, 1007, 1079, 2291, 2322, 2625
BspCNI	CTCAG	8 cut(s)	4, 258, 1032, 1042, 1618, 1906, 2402, 2788
BspEI	TCCGGA	4 cut(s)	383, 453, 2413, 2442
BspFNI	CGCG	6 cut(s)	614, 710, 795, 797, 808, 810
BspHI	TCATGA	2 cut(s)	756, 2353
BspLI	GGNNCC	3 cut(s)	1151, 1892, 2749
BspMI	ACCTGC	3 cut(s)	926, 1634, 1978
BspOI	GCTAGC	2 cut(s)	2582, 2672
BspPI	GGATC	5 cut(s)	669, 831, 1225, 2159, 2291
BspQI	GCTCTTC	1 cut(s)	318
BspT107I	GGYRCC	2 cut(s)	1149, 2747
BsrBI	CCGCTC	1 cut(s)	300
BsrDI	GCAATG	5 cut(s)	1320, 1404, 1623, 2069, 2451
BsrGI	TGTACA	2 cut(s)	2098, 2508
BsrI	ACTGG	3 cut(s)	1912, 1956, 2168
BssECI	CCNNGG	9 cut(s)	396, 588, 1443, 1474, 1738, 1782, 1808, 1894, 2144
BssHII	GCGCGC	2 cut(s)	708, 793
BssSI	CACGAG	2 cut(s)	230, 446
BssT1I	CCWWGG	4 cut(s)	1443, 1474, 1782, 1894
Bst2BI	CACGAG	2 cut(s)	230, 446
Bst2UI	CCWGG	7 cut(s)	574, 589, 979, 1589, 1740, 1809, 2145
Bst4CI	ACNGT	4 cut(s)	526, 820, 2346, 2549
Bst6I	CTCTTC	4 cut(s)	318, 534, 1283, 2407
BstAPI	GCANNNNNTGC	1 cut(s)	1324
BstAUI	TGTACA	2 cut(s)	2098, 2508
BstEII	GGTNACC	1 cut(s)	526
BstF5I	GGATG	4 cut(s)	67, 1597, 2655, 2659
BstFNI	CGCG	6 cut(s)	614, 710, 795, 797, 808, 810
BstH2I	RGCGCY	4 cut(s)	623, 1059, 1164, 1170
BstMAI	GTCTC	4 cut(s)	809, 1106, 1469, 2687
BstMCI	CGRYCG	2 cut(s)	495, 867
BstNI	CCWGG	7 cut(s)	574, 589, 979, 1589, 1740, 1809, 2145
BstNSI	RCATGY	2 cut(s)	2509, 2681
BstPAI	GACNNNNGTC	1 cut(s)	434
BstPI	GGTNACC	1 cut(s)	526
BstSFI	CTRYAG	1 cut(s)	1945
BstSLI	GKGCMC	1 cut(s)	2752
BstUI	CGCG	6 cut(s)	614, 710, 795, 797, 808, 810
BstV1I	GCAGC	7 cut(s)	609, 1125, 1156, 1282, 1673, 1693, 2677
BstV2I	GAAGAC	4 cut(s)	851, 1964, 2069, 2276
BstX2I	RGATCY	1 cut(s)	823
BstYI	RGATCY	1 cut(s)	823
BstZI	CGGCCG	1 cut(s)	864
Bsu36I	CCTNAGG	1 cut(s)	1050
BsuI	GTATCC	1 cut(s)	2565
BsuRI	GGCC	9 cut(s)	178, 635, 866, 977, 1007, 1079, 2291, 2322, 2625
BtgZI	GCGATG	3 cut(s)	331, 983, 2597
BtrI	CACGTC	1 cut(s)	1156
BtsCI	GGATG	4 cut(s)	67, 1597, 2655, 2659
BtsIMutI	CAGTG	4 cut(s)	1911, 2015, 2554, 2613
BveI	ACCTGC	3 cut(s)	926, 1634, 1978
CaiI	CAGNNNCTG	2 cut(s)	88, 2612
CciI	TCATGA	2 cut(s)	756, 2353
Cfr13I	GGNCC	3 cut(s)	601, 633, 2339
CpoI	CGGWCCG	1 cut(s)	601
CseI	GACGC	5 cut(s)	259, 355, 814, 856, 941
Csp6I	GTAC	5 cut(s)	688, 1561, 1686, 2099, 2509
CspI	CGGWCCG	1 cut(s)	601
CviQI	GTAC	5 cut(s)	688, 1561, 1686, 2099, 2509
EaeI	YGGCCR	3 cut(s)	176, 864, 2623
EagI	CGGCCG	1 cut(s)	864
Eam1104I	CTCTTC	4 cut(s)	318, 534, 1283, 2407
EarI	CTCTTC	4 cut(s)	318, 534, 1283, 2407
EciI	GGCGGA	1 cut(s)	329
Ecl136II	GAGCTC	3 cut(s)	31, 451, 1018
EclXI	CGGCCG	1 cut(s)	864
Eco130I	CCWWGG	4 cut(s)	1443, 1474, 1782, 1894
Eco147I	AGGCCT	3 cut(s)	977, 1079, 2291
Eco24I	GRGCYC	3 cut(s)	33, 453, 1020
Eco32I	GATATC	1 cut(s)	18
Eco47I	GGWCC	2 cut(s)	601, 2339
Eco47III	AGCGCT	1 cut(s)	1168
Eco52I	CGGCCG	1 cut(s)	864
Eco53kI	GAGCTC	3 cut(s)	31, 451, 1018
Eco57I	CTGAAG	8 cut(s)	245, 1435, 1530, 1559, 2150, 2297, 2561, 2583
Eco81I	CCTNAGG	1 cut(s)	1050
Eco91I	GGTNACC	1 cut(s)	526
EcoICRI	GAGCTC	3 cut(s)	31, 451, 1018
EcoO65I	GGTNACC	1 cut(s)	526
EcoRI	GAATTC	2 cut(s)	1431, 1940
EcoRII	CCWGG	7 cut(s)	572, 587, 977, 1587, 1738, 1807, 2143
EcoRV	GATATC	1 cut(s)	18
EcoT14I	CCWWGG	4 cut(s)	1443, 1474, 1782, 1894
EcoT22I	ATGCAT	1 cut(s)	1320
EcoT38I	GRGCYC	3 cut(s)	33, 453, 1020
ErhI	CCWWGG	4 cut(s)	1443, 1474, 1782, 1894
Esp3I	CGTCTC	2 cut(s)	809, 1106
FalI	AAGNNNNNCTT	4 cut(s)	1386, 1418, 2123, 2155
FaqI	GGGAC	2 cut(s)	1111, 1912
FauI	CCCGC	1 cut(s)	1836
FbaI	TGATCA	4 cut(s)	900, 940, 1345, 1492
FokI	GGATG	4 cut(s)	54, 1604, 2662, 2666
FriOI	GRGCYC	3 cut(s)	33, 453, 1020
FspI	TGCGCA	1 cut(s)	1778
GsaI	CCCAGC	1 cut(s)	992
GsuI	CTGGAG	2 cut(s)	791, 1125
HaeII	RGCGCY	4 cut(s)	623, 1059, 1164, 1170
HaeIII	GGCC	9 cut(s)	178, 635, 866, 977, 1007, 1079, 2291, 2322, 2625
HgaI	GACGC	5 cut(s)	259, 355, 814, 856, 941
HincII	GTYRAC	1 cut(s)	2136
HindII	GTYRAC	1 cut(s)	2136
HindIII	AAGCTT	2 cut(s)	1526, 2517
HphI	GGTGA	7 cut(s)	386, 520, 950, 973, 1298, 2174, 2489
Hpy166II	GTNNAC	3 cut(s)	2136, 2342, 2767
Hpy8I	GTNNAC	3 cut(s)	2136, 2342, 2767
Hpy99I	CGWCG	5 cut(s)	275, 371, 478, 815, 935
HpyCH4III	ACNGT	4 cut(s)	526, 820, 2346, 2549
HpyCH4IV	ACGT	1 cut(s)	1155
HpySE526I	ACGT	1 cut(s)	1155
Kpn2I	TCCGGA	4 cut(s)	383, 453, 2413, 2442
Ksp22I	TGATCA	4 cut(s)	900, 940, 1345, 1492
LguI	GCTCTTC	1 cut(s)	318
Lsp1109I	GCAGC	7 cut(s)	609, 1125, 1156, 1282, 1673, 1693, 2677
LweI	GCATC	9 cut(s)	76, 82, 88, 94, 1964, 2054, 2482, 2612, 2623
MaeII	ACGT	1 cut(s)	1155
MaeIII	GTNAC	7 cut(s)	526, 1205, 1369, 1786, 1879, 2170, 2458
MbiI	CCGCTC	1 cut(s)	300
MfeI	CAATTG	1 cut(s)	191
MflI	RGATCY	1 cut(s)	823
MhlI	GDGCHC	6 cut(s)	33, 330, 453, 1020, 1329, 2752
MlsI	TGGCCA	1 cut(s)	2625
MluNI	TGGCCA	1 cut(s)	2625
MlyI	GAGTC	5 cut(s)	44, 181, 444, 527, 1097
MmeI	TCCRAC	4 cut(s)	306, 1224, 1831, 2582
Mox20I	TGGCCA	1 cut(s)	2625
Mph1103I	ATGCAT	1 cut(s)	1320
MroI	TCCGGA	4 cut(s)	383, 453, 2413, 2442
MroXI	GAANNNNTTC	2 cut(s)	887, 1044
MscI	TGGCCA	1 cut(s)	2625
MseI	TTAA	4 cut(s)	836, 1512, 1839, 2682
MslI	CAYNNNNRTG	3 cut(s)	2456, 2475, 2682
Msp20I	TGGCCA	1 cut(s)	2625
MunI	CAATTG	1 cut(s)	191
Mva1269I	GAATGC	4 cut(s)	1044, 1318, 2387, 2466
MvaI	CCWGG	7 cut(s)	574, 589, 979, 1589, 1740, 1809, 2145
MvnI	CGCG	6 cut(s)	614, 710, 795, 797, 808, 810
NciI	CCSGG	3 cut(s)	398, 632, 1096
NheI	GCTAGC	2 cut(s)	2578, 2668
NlaIV	GGNNCC	3 cut(s)	1151, 1892, 2749
NmeAIII	GCCGAG	2 cut(s)	842, 1033
NmuCI	GTSAC	4 cut(s)	526, 1786, 1879, 2458
NsbI	TGCGCA	1 cut(s)	1778
NsiI	ATGCAT	1 cut(s)	1320
NspI	RCATGY	2 cut(s)	2509, 2681
OliI	CACNNNNGTG	1 cut(s)	2475
PagI	TCATGA	2 cut(s)	756, 2353
PaqCI	CACCTGC	1 cut(s)	926
PauI	GCGCGC	2 cut(s)	708, 793
PceI	AGGCCT	3 cut(s)	977, 1079, 2291
PciI	ACATGT	1 cut(s)	2505
PciSI	GCTCTTC	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	3 cut(s)	270, 1005, 1435
PctI	GAATGC	4 cut(s)	1044, 1318, 2387, 2466
PdmI	GAANNNNTTC	2 cut(s)	887, 1044
PfeI	GAWTC	5 cut(s)	104, 607, 1426, 1609, 2243
PflMI	CCANNNNNTGG	2 cut(s)	2428, 2759
PleI	GAGTC	5 cut(s)	44, 181, 443, 527, 1096
PpsI	GAGTC	5 cut(s)	44, 181, 443, 527, 1096
PscI	ACATGT	1 cut(s)	2505
PshAI	GACNNNNGTC	1 cut(s)	434
Psp124BI	GAGCTC	3 cut(s)	33, 453, 1020
Psp6I	CCWGG	7 cut(s)	572, 587, 977, 1587, 1738, 1807, 2143
PspEI	GGTNACC	1 cut(s)	526
PspFI	CCCAGC	1 cut(s)	988
PspGI	CCWGG	7 cut(s)	572, 587, 977, 1587, 1738, 1807, 2143
PspN4I	GGNNCC	3 cut(s)	1151, 1892, 2749
PspPI	GGNCC	3 cut(s)	601, 633, 2339
PstNI	CAGNNNCTG	2 cut(s)	88, 2612
PsuI	RGATCY	1 cut(s)	823
PteI	GCGCGC	2 cut(s)	708, 793
RsaI	GTAC	5 cut(s)	689, 1562, 1687, 2100, 2510
RsaNI	GTAC	5 cut(s)	688, 1561, 1686, 2099, 2509
RseI	CAYNNNNRTG	3 cut(s)	2456, 2475, 2682
Rsr2I	CGGWCCG	1 cut(s)	601
RsrII	CGGWCCG	1 cut(s)	601
SacI	GAGCTC	3 cut(s)	33, 453, 1020
SapI	GCTCTTC	1 cut(s)	318
SaqAI	TTAA	4 cut(s)	836, 1512, 1839, 2682
Sau96I	GGNCC	3 cut(s)	601, 633, 2339
ScaI	AGTACT	1 cut(s)	689
SchI	GAGTC	5 cut(s)	44, 181, 444, 527, 1097
SduI	GDGCHC	6 cut(s)	33, 330, 453, 1020, 1329, 2752
SfaNI	GCATC	9 cut(s)	76, 82, 88, 94, 1964, 2054, 2482, 2612, 2623
SfcI	CTRYAG	1 cut(s)	1945
SinI	GGWCC	2 cut(s)	601, 2339
SmiMI	CAYNNNNRTG	3 cut(s)	2456, 2475, 2682
SmlI	CTYRAG	6 cut(s)	827, 1358, 1500, 1529, 1800, 1829
SmoI	CTYRAG	6 cut(s)	827, 1358, 1500, 1529, 1800, 1829
SseBI	AGGCCT	3 cut(s)	977, 1079, 2291
SstI	GAGCTC	3 cut(s)	33, 453, 1020
StuI	AGGCCT	3 cut(s)	977, 1079, 2291
StyI	CCWWGG	4 cut(s)	1443, 1474, 1782, 1894
TaaI	ACNGT	4 cut(s)	526, 820, 2346, 2549
TaiI	ACGT	1 cut(s)	1158
TaqII	GACCGA	1 cut(s)	509
TatI	WGTACW	4 cut(s)	687, 1560, 2098, 2508
TauI	GCSGC	5 cut(s)	353, 800, 1295, 1343, 2639
TfiI	GAWTC	5 cut(s)	104, 607, 1426, 1609, 2243
Tru1I	TTAA	4 cut(s)	836, 1512, 1839, 2682
Tru9I	TTAA	4 cut(s)	836, 1512, 1839, 2682
TscAI	CASTG	4 cut(s)	1918, 2022, 2554, 2613
TseFI	GTSAC	4 cut(s)	526, 1786, 1879, 2458
TseI	GCWGC	7 cut(s)	622, 1138, 1169, 1295, 1661, 1706, 2665
Tsp45I	GTSAC	4 cut(s)	526, 1786, 1879, 2458
TspGWI	ACGGA	2 cut(s)	198, 801
TspRI	CASTG	4 cut(s)	1918, 2022, 2554, 2613
Van91I	CCANNNNNTGG	2 cut(s)	2428, 2759
VpaK11BI	GGWCC	2 cut(s)	601, 2339
XapI	RAATTY	5 cut(s)	458, 1431, 1940, 1961, 2741
XbaI	TCTAGA	1 cut(s)	2107
XceI	RCATGY	2 cut(s)	2509, 2681
XmaJI	CCTAGG	1 cut(s)	1474
XmnI	GAANNNNTTC	2 cut(s)	887, 1044
ZrmI	AGTACT	1 cut(s)	689
Zsp2I	ATGCAT	1 cut(s)	1320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.