Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0014256

Physical Location & Seq

Genomic Coordinates Reverse (-)

63090615 .. 63094481

Gene Structure 3867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G039050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGCAAGCCTTCTCGCCCTCCTTCGCCGTCTGTTCCTATTTTCCGATACGACGCCGTCGCATCACCACCGCCTCTCCCCGCAGATCCAACCTCAAGCGACTCACTTCCGCGTCGTCCAACTCACTCGCCGACGACAGCTCCACCAGGTCCGGTCCTCCTCCTCAATTTTTTTTTTTTATAGAGATCGCTAGAGAACGGTACGGGAAGCTGAACACGATAGTGATGAACGCGGTGGTGGAGGCGTGTGTCCATTGCGGCGACATCGACTCTGCACTTAAGGTGTTCGACGAAATGTCTAAGCCGGGGAGCTGTGGCGTTGATACTGTCACATATGCTACACTTTTGAAGGCATTTGAAGTGCTTGAATCCGTCGAACGCGGTGTTGCTGTGGGAAGTCCAAAGTTGTCAGCACCTCTTATTTTTGGACTGCTGAATGCTTTGGTTGAAGCAGGAGATTTACGCCGAGCTAATGGACTTCTTGCACGGTATGGTTTTCTGCTTCGAGAAGGTGGCAGTCTTTCACTCAGAGTCTACAACTTATTAATGAAGGGATGTATTAATTCAGGCCTTCCTCAGGGTGCGATAGACATGCACAACGAATTAATACGTCTAGGGTTGAAGCCTGATAGGCTTACCTATAATACTCTAATATCTGCATGTGTAAAAGCTGGGAAGTTGGATGCCGCAATGCAATACTTTGAGGAAATGAAGGATGAAGCGCAGAAATTTAGTGATGCTGGTCTATTCCCTGATGTCATCACCTATAGTACATTGCTTAAGGGTTTTGGGGATTCCAAAGATATCCTTATGGTTCATAAGATTGTTTCAGAAATGAAAACATATATTGGTTTGTTCATTGATCGAACAGCATATACGGCAGCAGTTGATGCTTTGCTAAATTGTGACGCAATAAAGGGTGCTTTATGTATTTTCGGAGAATTACTAAAGCAGGCTGGTGGAAATCCAGAGTTGCGACCCAAACCTCACCTTTATCTTTCCTTGATGCGTGCCTTTGCTGTTAGAGGAGATTATGACACAGTAAACAGTCTGCATAAGCACATGTGGCTAGATACTGCTGGAACTATCTACCCAATGATTCATGAAGAAGCTGATCATCTTGTAATGGAGTCAGCTTTAAATGATGGGCAGGTAGATTTGGCCAAAAATTACCTTGGAACCATCATTACAAGGTGGAAGAGAATAGCGTGGACAAGTCGAGGAGGCATGGTTGCTCTACGCACAGAGGCCTTGTTGGGAAACACAAAATCGATATTGACTCCTTATCTACTTCCTCAGGTATTGGCTAGTGATCCGATTGAGAGTGTGATGATGCCCTTTGAAGCAGCTCGGCCACTTCTTGGGACTGTGAAGTTGAGTGAGGTGGCTATGCGTTTCTTTAGAGATTCAGCAGTGCCTATCATAGATGACTGGGGTAACTGCATTGGAGTATTGCACCGTGAAGACTGTACAGAGTTGGATGCCCCTCTTTCTTCAATGATGAGAAGCCCACCTCCCTGTGCCGTGACAACAACATCGATTGGCCATGTGGTGGATCTAATTGTGAAGCACAGATTCAAAATGGTAGTCGTAGTAAACCATAGCTCCTTGTTTGGTGGTACTGCAAATTTGAGGGCTGTTGGTGTTTTTACAGCTGAGCAACTGTGTAAACTTGTCACACCAGTATCAGAAACACCACGATTGAAACCTTCTTTCTGTAGAAGTTTAACAATGTGCTGTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS PPR PPR_2

Protein Analysis

580

Amino Acids

63.65

Weight (kDa)

8.4

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	71 - 118	2.8e-08	PPR repeat family
PPR_2	PF13041	177 - 222	4.7e-10	PPR repeat family
PPR_3	PF13812	200 - 239	1.7e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	205 - 237	9.4e-10	PPR repeat
PPR_2	PF13041	212 - 240	3.4e-07	PPR repeat family
PPR	PF01535	212 - 238	1.6e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10690 AT5G10690
fragaria_vesca	FvH4_2g36670 FvH4_2g36670
malus_domestica	MD08G1128000.v1.1
prunus_persica	Prupe.1G459800_v2.0.a1
pyrus_communis	pycom08g10700
rosa_chinensis	RchiOBHm_Chr6g0305021
rosa_laevigata	RLG00000010927
rosa_multiflora	Rmu_sc0000061.1_g000039
rosa_roxburghii	Rroxscaffold_7G00163250
rosa_rugosa	Rorug06G0336800
rosa_samantha	Rh6AG448400 Rh6BG452500 Rh6CG462100 Rh6DG449000
rosa_wichuraiana	Rw6G039050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1138
AccB7I	CCANNNNNTGG	2 cut(s)	1358, 1549
AccI	GTMKAC	1 cut(s)	531
AccII	CGCG	3 cut(s)	110, 230, 378
AciI	CCGC	7 cut(s)	69, 79, 108, 230, 255, 378, 684
AclWI	GGATC	3 cut(s)	78, 1304, 1560
AcoI	YGGCCR	3 cut(s)	1158, 1349, 1540
AcsI	RAATTY	2 cut(s)	725, 1624
AcyI	GRCGYC	1 cut(s)	52
AfaI	GTAC	4 cut(s)	200, 769, 1468, 1618
AfiI	CCNNNNNNNGG	3 cut(s)	574, 1358, 1549
AflII	CTTAAG	2 cut(s)	275, 776
AflIII	ACRYGT	1 cut(s)	1059
AgsI	TTSAA	9 cut(s)	346, 356, 365, 446, 619, 1340, 1494, 1576, 1702
AhdI	GACNNNNNGTC	1 cut(s)	292
AjnI	CCWGG	1 cut(s)	143
AleI	CACNNNNGTG	1 cut(s)	218
AlwI	GGATC	3 cut(s)	78, 1304, 1560
AoxI	GGCC	5 cut(s)	565, 1158, 1245, 1349, 1540
ApeKI	GCWGC	2 cut(s)	878, 1343
ApoI	RAATTY	2 cut(s)	725, 1624
ArsI	GACNNNNNNTTYG	2 cut(s)	1569, 1601
AseI	ATTAAT	3 cut(s)	542, 558, 602
AspLEI	GCGC	1 cut(s)	721
AspS9I	GGNCC	2 cut(s)	147, 152
AsuC2I	CCSGG	1 cut(s)	303
AsuHPI	GGTGA	3 cut(s)	55, 751, 977
AvaII	GGWCC	2 cut(s)	147, 152
AxyI	CCTNAGG	2 cut(s)	573, 1293
BaeI	ACNNNNGTAYC	2 cut(s)	1665, 1698
BalI	TGGCCA	2 cut(s)	1160, 1542
BbsI	GAAGAC	1 cut(s)	1467
BbvI	GCAGC	2 cut(s)	890, 1355
BccI	CCATC	2 cut(s)	1136, 1187
BceAI	ACGGC	4 cut(s)	11, 39, 891, 1505
BcgI	CGANNNNNNTGC	2 cut(s)	571, 605
BciT130I	CCWGG	1 cut(s)	145
BclI	TGATCA	1 cut(s)	1111
BcnI	CCSGG	1 cut(s)	303
BfaI	CTAG	4 cut(s)	189, 611, 1067, 1305
BfmI	CTRYAG	2 cut(s)	763, 1714
BfrI	CTTAAG	2 cut(s)	275, 776
BfuAI	ACCTGC	1 cut(s)	1138
BglI	GCCNNNNNGGC	1 cut(s)	628
BisI	GCNGC	4 cut(s)	256, 684, 879, 1344
BlpI	GCTNAGC	1 cut(s)	1653
BlsI	GCNGC	4 cut(s)	257, 685, 880, 1345
Bme1390I	CCNGG	2 cut(s)	145, 303
Bme18I	GGWCC	2 cut(s)	147, 152
BmeRI	GACNNNNNGTC	1 cut(s)	292
BmgT120I	GGNCC	2 cut(s)	147, 152
BmiI	GGNNCC	1 cut(s)	1177
BmrFI	CCNGG	2 cut(s)	145, 303
BmrI	ACTGGG	1 cut(s)	1438
BmsI	GCATC	7 cut(s)	69, 670, 724, 877, 993, 1320, 1468
BmuI	ACTGGG	1 cut(s)	1438
BpiI	GAAGAC	1 cut(s)	1467
Bpu1102I	GCTNAGC	1 cut(s)	1653
BpuEI	CTTGAG	1 cut(s)	77
BpuMI	CCSGG	1 cut(s)	303
Bsa29I	ATCGAT	2 cut(s)	1268, 1535
BsaHI	GRCGYC	1 cut(s)	52
BsaJI	CCNNGG	2 cut(s)	302, 1171
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	8 cut(s)	58, 88, 122, 152, 1212, 1242, 1586, 1616
Bsc4I	CCNNNNNNNGG	3 cut(s)	574, 1358, 1549
Bse1I	ACTGG	2 cut(s)	1433, 1679
Bse21I	CCTNAGG	2 cut(s)	573, 1293
Bse3DI	GCAATG	3 cut(s)	250, 693, 770
BseBI	CCWGG	1 cut(s)	145
BseCI	ATCGAT	2 cut(s)	1268, 1535
BseDI	CCNNGG	2 cut(s)	302, 1171
BseGI	GGATG	4 cut(s)	557, 685, 718, 1483
BseLI	CCNNNNNNNGG	3 cut(s)	574, 1358, 1549
BseMI	GCAATG	3 cut(s)	250, 693, 770
BseMII	CTCAG	4 cut(s)	538, 587, 1307, 1644
BseNI	ACTGG	2 cut(s)	1433, 1679
BseRI	GAGGAG	4 cut(s)	147, 150, 1038, 1233
BseXI	GCAGC	2 cut(s)	890, 1355
BseYI	CCCAGC	1 cut(s)	668
BsgI	GTGCAG	1 cut(s)	255
Bsh1236I	CGCG	3 cut(s)	110, 230, 378
BshFI	GGCC	5 cut(s)	567, 1160, 1247, 1351, 1542
BshVI	ATCGAT	2 cut(s)	1268, 1535
BsiSI	CCGG	2 cut(s)	150, 302
BslFI	GGGAC	1 cut(s)	1375
BslI	CCNNNNNNNGG	3 cut(s)	574, 1358, 1549
BsmFI	GGGAC	1 cut(s)	1375
BsmI	GAATGC	1 cut(s)	439
BsnI	GGCC	5 cut(s)	567, 1160, 1247, 1351, 1542
Bsp1407I	TGTACA	1 cut(s)	1466
Bsp143I	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
Bsp1720I	GCTNAGC	1 cut(s)	1653
BspACI	CCGC	7 cut(s)	69, 79, 108, 230, 255, 378, 684
BspANI	GGCC	5 cut(s)	567, 1160, 1247, 1351, 1542
BspCNI	CTCAG	4 cut(s)	537, 586, 1306, 1645
BspDI	ATCGAT	2 cut(s)	1268, 1535
BspFNI	CGCG	3 cut(s)	110, 230, 378
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	1 cut(s)	1177
BspMI	ACCTGC	1 cut(s)	1138
BspPI	GGATC	3 cut(s)	78, 1304, 1560
BspTI	CTTAAG	2 cut(s)	275, 776
BsrDI	GCAATG	3 cut(s)	250, 693, 770
BsrGI	TGTACA	1 cut(s)	1466
BsrI	ACTGG	2 cut(s)	1433, 1679
BssECI	CCNNGG	2 cut(s)	302, 1171
BssMI	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
BssNI	GRCGYC	1 cut(s)	52
BssT1I	CCWWGG	1 cut(s)	1171
Bst2UI	CCWGG	1 cut(s)	145
Bst4CI	ACNGT	9 cut(s)	198, 325, 486, 1039, 1046, 1366, 1457, 1466, 1662
Bst6I	CTCTTC	1 cut(s)	1190
BstACI	GRCGYC	1 cut(s)	52
BstAFI	CTTAAG	2 cut(s)	275, 776
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstAUI	TGTACA	1 cut(s)	1466
BstC8I	GCNNGC	3 cut(s)	6, 951, 1008
BstDEI	CTNAG	5 cut(s)	297, 524, 573, 1293, 1653
BstENI	CCTNNNNNAGG	1 cut(s)	572
BstF5I	GGATG	4 cut(s)	557, 685, 718, 1483
BstFNI	CGCG	3 cut(s)	110, 230, 378
BstHHI	GCGC	1 cut(s)	721
BstKTI	GATC	6 cut(s)	86, 186, 862, 1114, 1312, 1555
BstMBI	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
BstMWI	GCNNNNNNNGC	4 cut(s)	628, 875, 887, 1063
BstNI	CCWGG	1 cut(s)	145
BstNSI	RCATGY	3 cut(s)	592, 660, 1063
BstSCI	CCNGG	2 cut(s)	143, 301
BstSFI	CTRYAG	2 cut(s)	763, 1714
BstUI	CGCG	3 cut(s)	110, 230, 378
BstV1I	GCAGC	2 cut(s)	890, 1355
BstV2I	GAAGAC	1 cut(s)	1467
BstX2I	RGATCY	2 cut(s)	83, 1552
BstYI	RGATCY	2 cut(s)	83, 1552
Bsu15I	ATCGAT	2 cut(s)	1268, 1535
Bsu36I	CCTNAGG	2 cut(s)	573, 1293
BsuRI	GGCC	5 cut(s)	567, 1160, 1247, 1351, 1542
BsuTUI	ATCGAT	2 cut(s)	1268, 1535
BtsCI	GGATG	4 cut(s)	557, 685, 718, 1483
BtsI	GCAGTG	1 cut(s)	1416
BtsIMutI	CAGTG	1 cut(s)	1416
BveI	ACCTGC	1 cut(s)	1138
Cac8I	GCNNGC	3 cut(s)	6, 951, 1008
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	1 cut(s)	721
Cfr13I	GGNCC	2 cut(s)	147, 152
ClaI	ATCGAT	2 cut(s)	1268, 1535
CseI	GACGC	3 cut(s)	60, 99, 914
CsiI	ACCWGGT	1 cut(s)	143
Csp6I	GTAC	4 cut(s)	199, 768, 1467, 1617
CviAII	CATG	6 cut(s)	589, 657, 1060, 1100, 1225, 1544
CviQI	GTAC	4 cut(s)	199, 768, 1467, 1617
DdeI	CTNAG	5 cut(s)	297, 524, 573, 1293, 1653
DpnI	GATC	6 cut(s)	85, 185, 861, 1113, 1311, 1554
DpnII	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
DraI	TTTAAA	1 cut(s)	1137
DriI	GACNNNNNGTC	1 cut(s)	292
EaeI	YGGCCR	3 cut(s)	1158, 1349, 1540
Eam1104I	CTCTTC	1 cut(s)	1190
Eam1105I	GACNNNNNGTC	1 cut(s)	292
EarI	CTCTTC	1 cut(s)	1190
Eco130I	CCWWGG	1 cut(s)	1171
Eco147I	AGGCCT	2 cut(s)	567, 1247
Eco32I	GATATC	1 cut(s)	802
Eco47I	GGWCC	2 cut(s)	147, 152
Eco81I	CCTNAGG	2 cut(s)	573, 1293
EcoNI	CCTNNNNNAGG	1 cut(s)	572
EcoRII	CCWGG	1 cut(s)	143
EcoRV	GATATC	1 cut(s)	802
EcoT14I	CCWWGG	1 cut(s)	1171
ErhI	CCWWGG	1 cut(s)	1171
FaeI	CATG	6 cut(s)	592, 660, 1063, 1103, 1228, 1547
FalI	AAGNNNNNCTT	2 cut(s)	789, 821
FaqI	GGGAC	1 cut(s)	1375
FatI	CATG	6 cut(s)	588, 656, 1059, 1099, 1224, 1543
FauI	CCCGC	1 cut(s)	86
FauNDI	CATATG	1 cut(s)	331
FbaI	TGATCA	1 cut(s)	1111
FblI	GTMKAC	1 cut(s)	531
Fnu4HI	GCNGC	4 cut(s)	256, 684, 879, 1344
FokI	GGATG	4 cut(s)	564, 692, 725, 1490
Fsp4HI	GCNGC	4 cut(s)	256, 684, 879, 1344
FspBI	CTAG	4 cut(s)	189, 611, 1067, 1305
GlaI	GCGC	1 cut(s)	720
GluI	GCNGC	4 cut(s)	256, 684, 879, 1344
GsaI	CCCAGC	1 cut(s)	672
HaeIII	GGCC	5 cut(s)	567, 1160, 1247, 1351, 1542
HapII	CCGG	2 cut(s)	150, 302
HgaI	GACGC	3 cut(s)	60, 99, 914
HhaI	GCGC	1 cut(s)	721
Hin1I	GRCGYC	1 cut(s)	52
Hin1II	CATG	6 cut(s)	592, 660, 1063, 1103, 1228, 1547
Hin6I	GCGC	1 cut(s)	719
HinP1I	GCGC	1 cut(s)	719
HpaII	CCGG	2 cut(s)	150, 302
HphI	GGTGA	3 cut(s)	55, 751, 977
Hpy166II	GTNNAC	5 cut(s)	532, 1042, 1209, 1594, 1667
Hpy188I	TCNGA	6 cut(s)	45, 527, 829, 935, 1314, 1687
Hpy188III	TCNNGA	3 cut(s)	503, 965, 1100
Hpy8I	GTNNAC	5 cut(s)	532, 1042, 1209, 1594, 1667
Hpy99I	CGWCG	6 cut(s)	54, 60, 115, 134, 290, 374
HpyAV	CCTTC	8 cut(s)	19, 31, 340, 500, 541, 578, 703, 1716
HpyCH4III	ACNGT	9 cut(s)	198, 325, 486, 1039, 1046, 1366, 1457, 1466, 1662
HpyCH4IV	ACGT	1 cut(s)	607
HpyF10VI	GCNNNNNNNGC	4 cut(s)	628, 875, 887, 1063
HpyF3I	CTNAG	5 cut(s)	297, 524, 573, 1293, 1653
HpySE526I	ACGT	1 cut(s)	607
Hsp92I	GRCGYC	1 cut(s)	52
Hsp92II	CATG	6 cut(s)	592, 660, 1063, 1103, 1228, 1547
HspAI	GCGC	1 cut(s)	719
Ksp22I	TGATCA	1 cut(s)	1111
Kzo9I	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
LmnI	GCTCC	3 cut(s)	143, 306, 1607
Lsp1109I	GCAGC	2 cut(s)	890, 1355
LweI	GCATC	7 cut(s)	69, 670, 724, 877, 993, 1320, 1468
MabI	ACCWGGT	1 cut(s)	143
MaeI	CTAG	4 cut(s)	189, 611, 1067, 1305
MaeII	ACGT	1 cut(s)	607
MaeIII	GTNAC	5 cut(s)	325, 902, 1433, 1522, 1672
MalI	GATC	6 cut(s)	85, 185, 861, 1113, 1311, 1554
MboI	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
MboII	GAAGA	4 cut(s)	1115, 1207, 1472, 1482
MflI	RGATCY	2 cut(s)	83, 1552
MlsI	TGGCCA	2 cut(s)	1160, 1542
MluCI	AATT	9 cut(s)	164, 559, 599, 725, 898, 938, 1165, 1557, 1624
MluNI	TGGCCA	2 cut(s)	1160, 1542
MlyI	GAGTC	5 cut(s)	93, 260, 537, 1136, 1270
MmeI	TCCRAC	4 cut(s)	111, 141, 657, 1455
Mox20I	TGGCCA	2 cut(s)	1160, 1542
MscI	TGGCCA	2 cut(s)	1160, 1542
MseI	TTAA	7 cut(s)	276, 542, 558, 602, 777, 1136, 1724
MslI	CAYNNNNRTG	1 cut(s)	218
Msp20I	TGGCCA	2 cut(s)	1160, 1542
MspA1I	CMGCKG	1 cut(s)	1652
MspCI	CTTAAG	2 cut(s)	275, 776
MspI	CCGG	2 cut(s)	150, 302
MspR9I	CCNGG	2 cut(s)	145, 303
Mva1269I	GAATGC	1 cut(s)	439
MvaI	CCWGG	1 cut(s)	145
MvnI	CGCG	3 cut(s)	110, 230, 378
MwoI	GCNNNNNNNGC	4 cut(s)	628, 875, 887, 1063
NciI	CCSGG	1 cut(s)	303
NdeI	CATATG	1 cut(s)	331
NdeII	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
NlaIII	CATG	6 cut(s)	592, 660, 1063, 1103, 1228, 1547
NlaIV	GGNNCC	1 cut(s)	1177
NmeAIII	GCCGAG	2 cut(s)	488, 1327
NmuCI	GTSAC	4 cut(s)	325, 902, 1522, 1672
NspI	RCATGY	3 cut(s)	592, 660, 1063
OliI	CACNNNNGTG	1 cut(s)	218
PagI	TCATGA	1 cut(s)	1099
PceI	AGGCCT	2 cut(s)	567, 1247
PciI	ACATGT	1 cut(s)	1059
PctI	GAATGC	1 cut(s)	439
PfeI	GAWTC	5 cut(s)	365, 791, 1096, 1403, 1572
PflFI	GACNNNGTC	1 cut(s)	54
PflMI	CCANNNNNTGG	2 cut(s)	1358, 1549
PkrI	GCNGC	4 cut(s)	257, 685, 880, 1345
PleI	GAGTC	5 cut(s)	93, 260, 536, 1135, 1270
PpsI	GAGTC	5 cut(s)	93, 260, 536, 1135, 1270
PscI	ACATGT	1 cut(s)	1059
PshBI	ATTAAT	3 cut(s)	542, 558, 602
Psp6I	CCWGG	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	668
PspGI	CCWGG	1 cut(s)	143
PspN4I	GGNNCC	1 cut(s)	1177
PspPI	GGNCC	2 cut(s)	147, 152
PsrI	GAACNNNNNNTAC	4 cut(s)	856, 888, 1168, 1200
PsuI	RGATCY	2 cut(s)	83, 1552
PsyI	GACNNNGTC	1 cut(s)	54
PvuII	CAGCTG	1 cut(s)	1652
RsaI	GTAC	4 cut(s)	200, 769, 1468, 1618
RsaNI	GTAC	4 cut(s)	199, 768, 1467, 1617
RseI	CAYNNNNRTG	1 cut(s)	218
SaqAI	TTAA	7 cut(s)	276, 542, 558, 602, 777, 1136, 1724
SatI	GCNGC	4 cut(s)	256, 684, 879, 1344
Sau3AI	GATC	6 cut(s)	83, 183, 859, 1111, 1309, 1552
Sau96I	GGNCC	2 cut(s)	147, 152
SchI	GAGTC	5 cut(s)	93, 260, 537, 1136, 1270
ScrFI	CCNGG	2 cut(s)	145, 303
SexAI	ACCWGGT	1 cut(s)	143
SfaNI	GCATC	7 cut(s)	69, 670, 724, 877, 993, 1320, 1468
SfcI	CTRYAG	2 cut(s)	763, 1714
SinI	GGWCC	2 cut(s)	147, 152
SmiMI	CAYNNNNRTG	1 cut(s)	218
SmlI	CTYRAG	3 cut(s)	92, 275, 776
SmoI	CTYRAG	3 cut(s)	92, 275, 776
Sse9I	AATT	9 cut(s)	164, 559, 599, 725, 898, 938, 1165, 1557, 1624
SseBI	AGGCCT	2 cut(s)	567, 1247
SsiI	CCGC	7 cut(s)	69, 79, 108, 230, 255, 378, 684
SspMI	CTAG	4 cut(s)	189, 611, 1067, 1305
StuI	AGGCCT	2 cut(s)	567, 1247
StyD4I	CCNGG	2 cut(s)	143, 301
StyI	CCWWGG	1 cut(s)	1171
TaaI	ACNGT	9 cut(s)	198, 325, 486, 1039, 1046, 1366, 1457, 1466, 1662
TaiI	ACGT	1 cut(s)	610
TaqI	TCGA	8 cut(s)	264, 285, 372, 502, 862, 1216, 1268, 1535
TasI	AATT	9 cut(s)	164, 559, 599, 725, 898, 938, 1165, 1557, 1624
TatI	WGTACW	2 cut(s)	767, 1466
TauI	GCSGC	2 cut(s)	258, 686
TfiI	GAWTC	5 cut(s)	365, 791, 1096, 1403, 1572
Tru1I	TTAA	7 cut(s)	276, 542, 558, 602, 777, 1136, 1724
Tru9I	TTAA	7 cut(s)	276, 542, 558, 602, 777, 1136, 1724
TscAI	CASTG	1 cut(s)	1416
TseFI	GTSAC	4 cut(s)	325, 902, 1522, 1672
TseI	GCWGC	2 cut(s)	878, 1343
Tsp45I	GTSAC	4 cut(s)	325, 902, 1522, 1672
TspDTI	ATGAA	9 cut(s)	239, 560, 722, 729, 803, 844, 848, 1088, 1116
TspGWI	ACGGA	1 cut(s)	358
TspRI	CASTG	1 cut(s)	1416
Tth111I	GACNNNGTC	1 cut(s)	54
Van91I	CCANNNNNTGG	2 cut(s)	1358, 1549
Vha464I	CTTAAG	2 cut(s)	275, 776
VpaK11BI	GGWCC	2 cut(s)	147, 152
VspI	ATTAAT	3 cut(s)	542, 558, 602
XagI	CCTNNNNNAGG	1 cut(s)	572
XapI	RAATTY	2 cut(s)	725, 1624
XceI	RCATGY	3 cut(s)	592, 660, 1063
XmiI	GTMKAC	1 cut(s)	531
XspI	CTAG	4 cut(s)	189, 611, 1067, 1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.