AT1G01560

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
202103 .. 204440
2338 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G01560.4

Sequence Viewer

Length: 828 bp
ATGTCAATAGAGAAACCATTCTTCGGTGATGACAGCAACAGAGGAGTAAGTATCAATGGTGGTCGTTATGTGCAGTATAATGTCTATGGAAATCTCTTTGAAGTTTCTAAAAAGTATGTTCCTCCTCTTCGTCCTATCGGCAGAGGCGCTTCTGGCATCGTCTGTGCTGCATGGAATTCGGAGACGGGTGAGGAAGTAGCGATCAAGAAGATTGGTAATGCATTTGGCAACATTATCGACGCTAAGAGAACTTTGAGAGAGATTAAGCTTCTTAAGCATATGGATCATGACAATGTCATTGCCATTATAGACATAATAAGACCACCTCAGCCAGACAACTTCAATGATGTTCACATTGTCTATGAGTTAATGGACACTGATCTTCACCACATTATCCGCTCTAACCAACCGTTAACTGATGATCATTCACGGTTCTTCCTGTATCAGTTGTTGCGAGGCCTCAAGTATGTGCATTCAGCCAATGTACTGCATCGTGATTTAAAACCGAGTAACTTGCTCCTGAATGCAAACTGTGACCTCAAGATTGGGGATTTTGGGCTTGCGAGGACTAAATCAGAGACAGACTTCATGACAGAATATGTTGTTACACGTTGGTACCGAGCTCCAGAGTTGCTCCTTAATTGCTCAGAATACACTGCAGCTATCGACATTTGGTCTGTCGGTTGTATACTCGGTGAAATAATGACGCGGGAGCCGTTATTTCCGGGCAGAGATTATGTTCAGCAGCTTAGACTCATCACTGAGGTAAACTTTTCACTTTTTCACTTGACTATATTATTTCGTTTCAATTTGAAGAAAGAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006971 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009504 GO:0009555 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009861 GO:0009862 GO:0009863 GO:0009867 GO:0009868 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0014070 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031122 GO:0032260 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032870 GO:0033206 GO:0033993 GO:0035556 GO:0035690 GO:0035821 GO:0036211 GO:0042221 GO:0042493 GO:0042539 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045087 GO:0046677 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051321 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052306 GO:0052308 GO:0052552 GO:0052553 GO:0052564 GO:0052572 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071840 GO:0075136 GO:0080026 GO:0097305 GO:0097435 GO:0098542 GO:0140013 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:1901701 GO:1902410 GO:1903046 GO:1903047
KEGG Pathways
Metabolic & Signaling
ko01521 ko01522 ko01524 ko04010 ko04011 ko04012 ko04013 ko04014 ko04015 ko04016 ko04022 ko04024 ko04062 ko04066 ko04068 ko04071 ko04072 ko04114 ko04138 ko04139 ko04140 ko04150 ko04151 ko04210 ko04214 ko04218 ko04261 ko04270 ko04320 ko04350 ko04360 ko04370 ko04371 ko04380 ko04510 ko04520 ko04540 ko04550 ko04611 ko04620 ko04621 ko04650 ko04657 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko04668 ko04713 ko04720 ko04722 ko04723 ko04724 ko04725 ko04726 ko04730 ko04810 ko04910 ko04912 ko04914 ko04915 ko04916 ko04917 ko04919 ko04921 ko04926 ko04930 ko04933 ko04934 ko04960 ko05010 ko05020 ko05034 ko05131 ko05132 ko05133 ko05140 ko05142 ko05145 ko05152 ko05160 ko05161 ko05164 ko05165 ko05167 ko05200 ko05203 ko05205 ko05206 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 ko05230 ko05231 ko05418 map01521 map01522 map01524 map04010 map04011 map04012 map04013 map04014 map04015 map04016 map04022 map04024 map04062 map04066 map04068 map04071 map04072 map04114 map04138 map04139 map04140 map04150 map04151 map04210 map04214 map04218 map04261 map04270 map04320 map04350 map04360 map04370 map04371 map04380 map04510 map04520 map04540 map04550 map04611 map04620 map04621 map04650 map04657 map04658 map04659 map04660 map04662 map04664 map04666 map04668 map04713 map04720 map04722 map04723 map04724 map04725 map04726 map04730 map04810 map04910 map04912 map04914 map04915 map04916 map04917 map04919 map04921 map04926 map04930 map04933 map04934 map04960 map05010 map05020 map05034 map05131 map05132 map05133 map05140 map05142 map05145 map05152 map05160 map05161 map05164 map05165 map05167 map05200 map05203 map05205 map05206 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226 map05230 map05231 map05418
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

31.6

Weight (kDa)

6.8

Isoelectric Point (pI)

31.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 44 - 253 2.3e-59 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 44 - 237 1.8e-30 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 615
AccB1I GGYRCC 1 cut(s) 615
AccBSI CCGCTC 1 cut(s) 399
AccI GTMKAC 1 cut(s) 688
AccII CGCG 1 cut(s) 709
AciI CCGC 2 cut(s) 397, 709
AclWI GGATC 1 cut(s) 291
AcsI RAATTY 1 cut(s) 175
AfaI GTAC 2 cut(s) 486, 617
AfiI CCNNNNNNNGG 1 cut(s) 23
AflII CTTAAG 1 cut(s) 272
AflIII ACRYGT 1 cut(s) 608
AgsI TTSAA 4 cut(s) 101, 343, 808, 814
AhdI GACNNNNNGTC 1 cut(s) 673
AluBI AGCT 4 cut(s) 268, 623, 662, 748
AluI AGCT 4 cut(s) 268, 623, 662, 748
Alw21I GWGCWC 1 cut(s) 625
Alw26I GTCTC 2 cut(s) 176, 572
AlwI GGATC 1 cut(s) 291
AoxI GGCC 1 cut(s) 457
ApeKI GCWGC 3 cut(s) 167, 659, 745
ApoI RAATTY 1 cut(s) 175
Asp700I GAANNNNTTC 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 615
AspLEI GCGC 1 cut(s) 149
AsuC2I CCSGG 1 cut(s) 726
AsuHPI GGTGA 4 cut(s) 38, 200, 377, 707
BaeI ACNNNNGTAYC 2 cut(s) 599, 632
BanI GGYRCC 1 cut(s) 615
BanII GRGCYC 1 cut(s) 625
Bbv12I GWGCWC 1 cut(s) 625
BbvCI CCTCAGC 1 cut(s) 327
BbvI GCAGC 3 cut(s) 154, 671, 757
BceAI ACGGC 1 cut(s) 700
BcgI CGANNNNNNTGC 6 cut(s) 159, 193, 217, 251, 496, 530
BclI TGATCA 1 cut(s) 421
BcnI CCSGG 1 cut(s) 726
BcoDI GTCTC 2 cut(s) 176, 572
BfmI CTRYAG 1 cut(s) 657
BfoI RGCGCY 1 cut(s) 150
BfrI CTTAAG 1 cut(s) 272
BisI GCNGC 3 cut(s) 168, 660, 746
BlsI GCNGC 3 cut(s) 169, 661, 747
Bme1390I CCNGG 1 cut(s) 726
BmeRI GACNNNNNGTC 1 cut(s) 673
BmiI GGNNCC 2 cut(s) 617, 714
BmrFI CCNGG 1 cut(s) 726
BmsI GCATC 2 cut(s) 165, 499
BpmI CTGGAG 1 cut(s) 609
Bpu10I CCTNAGC 1 cut(s) 327
BpuEI CTTGAG 2 cut(s) 446, 524
BpuMI CCSGG 1 cut(s) 726
Bsc4I CCNNNNNNNGG 1 cut(s) 23
Bse3DI GCAATG 1 cut(s) 297
BseLI CCNNNNNNNGG 1 cut(s) 23
BseMI GCAATG 1 cut(s) 297
BseMII CTCAG 3 cut(s) 341, 660, 753
BseRI GAGGAG 2 cut(s) 57, 114
BseXI GCAGC 3 cut(s) 154, 671, 757
BsgI GTGCAG 1 cut(s) 92
Bsh1236I CGCG 1 cut(s) 709
BshFI GGCC 1 cut(s) 459
BshNI GGYRCC 1 cut(s) 615
BsiHKAI GWGCWC 1 cut(s) 625
BsiSI CCGG 1 cut(s) 725
BslI CCNNNNNNNGG 1 cut(s) 23
BsmAI GTCTC 2 cut(s) 176, 572
BsmBI CGTCTC 1 cut(s) 176
BsmI GAATGC 2 cut(s) 472, 529
BsnI GGCC 1 cut(s) 459
Bsp1286I GDGCHC 1 cut(s) 625
Bsp143I GATC 4 cut(s) 201, 283, 379, 421
BspACI CCGC 2 cut(s) 397, 709
BspANI GGCC 1 cut(s) 459
BspCNI CTCAG 3 cut(s) 340, 659, 754
BspFNI CGCG 1 cut(s) 709
BspHI TCATGA 2 cut(s) 286, 588
BspLI GGNNCC 2 cut(s) 617, 714
BspMAI CTGCAG 1 cut(s) 661
BspPI GGATC 1 cut(s) 291
BspT107I GGYRCC 1 cut(s) 615
BspTI CTTAAG 1 cut(s) 272
BsrBI CCGCTC 1 cut(s) 399
BsrDI GCAATG 1 cut(s) 297
BssMI GATC 4 cut(s) 201, 283, 379, 421
BssNAI GTATAC 1 cut(s) 689
Bst1107I GTATAC 1 cut(s) 689
Bst4CI ACNGT 3 cut(s) 411, 432, 533
Bst6I CTCTTC 1 cut(s) 132
BstAFI CTTAAG 1 cut(s) 272
BstC8I GCNNGC 1 cut(s) 561
BstDEI CTNAG 5 cut(s) 243, 327, 646, 749, 762
BstFNI CGCG 1 cut(s) 709
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 1 cut(s) 149
BstKTI GATC 4 cut(s) 204, 286, 382, 424
BstMAI GTCTC 2 cut(s) 176, 572
BstMBI GATC 4 cut(s) 201, 283, 379, 421
BstMWI GCNNNNNNNGC 2 cut(s) 153, 274
BstSCI CCNGG 1 cut(s) 724
BstSFI CTRYAG 1 cut(s) 657
BstUI CGCG 1 cut(s) 709
BstV1I GCAGC 3 cut(s) 154, 671, 757
BstZ17I GTATAC 1 cut(s) 689
BsuRI GGCC 1 cut(s) 459
BtsI GCAGTG 1 cut(s) 654
BtsIMutI CAGTG 3 cut(s) 375, 654, 759
Cac8I GCNNGC 1 cut(s) 561
CciI TCATGA 2 cut(s) 286, 588
CfoI GCGC 1 cut(s) 149
CseI GACGC 2 cut(s) 248, 715
Csp6I GTAC 2 cut(s) 485, 616
CviAII CATG 3 cut(s) 171, 287, 589
CviJI RGCY 9 cut(s) 268, 331, 459, 479, 559, 623, 662, 715, 748
CviKI_1 RGCY 9 cut(s) 268, 331, 459, 479, 559, 623, 662, 715, 748
CviQI GTAC 2 cut(s) 485, 616
DdeI CTNAG 5 cut(s) 243, 327, 646, 749, 762
DpnI GATC 4 cut(s) 203, 285, 381, 423
DpnII GATC 4 cut(s) 201, 283, 379, 421
DraI TTTAAA 1 cut(s) 501
DriI GACNNNNNGTC 1 cut(s) 673
Eam1104I CTCTTC 1 cut(s) 132
Eam1105I GACNNNNNGTC 1 cut(s) 673
EarI CTCTTC 1 cut(s) 132
Ecl136II GAGCTC 1 cut(s) 623
Eco147I AGGCCT 1 cut(s) 459
Eco24I GRGCYC 1 cut(s) 625
Eco53kI GAGCTC 1 cut(s) 623
EcoICRI GAGCTC 1 cut(s) 623
EcoRI GAATTC 1 cut(s) 175
EcoT22I ATGCAT 1 cut(s) 223
EcoT38I GRGCYC 1 cut(s) 625
Esp3I CGTCTC 1 cut(s) 176
FaeI CATG 3 cut(s) 174, 290, 592
FatI CATG 3 cut(s) 170, 286, 588
FauI CCCGC 1 cut(s) 702
FauNDI CATATG 1 cut(s) 279
FbaI TGATCA 1 cut(s) 421
FblI GTMKAC 1 cut(s) 688
Fnu4HI GCNGC 3 cut(s) 168, 660, 746
FriOI GRGCYC 1 cut(s) 625
Fsp4HI GCNGC 3 cut(s) 168, 660, 746
GlaI GCGC 1 cut(s) 148
GluI GCNGC 3 cut(s) 168, 660, 746
GsuI CTGGAG 1 cut(s) 609
HaeII RGCGCY 1 cut(s) 150
HaeIII GGCC 1 cut(s) 459
HapII CCGG 1 cut(s) 725
HgaI GACGC 2 cut(s) 248, 715
HhaI GCGC 1 cut(s) 149
Hin1II CATG 3 cut(s) 174, 290, 592
Hin6I GCGC 1 cut(s) 147
HinP1I GCGC 1 cut(s) 147
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 1 cut(s) 753
HpaI GTTAAC 1 cut(s) 414
HpaII CCGG 1 cut(s) 725
HphI GGTGA 4 cut(s) 38, 200, 377, 707
Hpy166II GTNNAC 4 cut(s) 352, 414, 689, 769
Hpy188I TCNGA 3 cut(s) 181, 577, 649
Hpy188III TCNNGA 7 cut(s) 205, 287, 494, 520, 541, 589, 626
Hpy8I GTNNAC 4 cut(s) 352, 414, 689, 769
Hpy99I CGWCG 1 cut(s) 242
HpyCH4III ACNGT 3 cut(s) 411, 432, 533
HpyCH4IV ACGT 1 cut(s) 610
HpyCH4V TGCA 7 cut(s) 73, 170, 221, 472, 490, 527, 659
HpyF10VI GCNNNNNNNGC 2 cut(s) 153, 274
HpyF3I CTNAG 5 cut(s) 243, 327, 646, 749, 762
HpySE526I ACGT 1 cut(s) 610
Hsp92II CATG 3 cut(s) 174, 290, 592
HspAI GCGC 1 cut(s) 147
KpnI GGTACC 1 cut(s) 619
Ksp22I TGATCA 1 cut(s) 421
KspAI GTTAAC 1 cut(s) 414
Kzo9I GATC 4 cut(s) 201, 283, 379, 421
LmnI GCTCC 4 cut(s) 522, 628, 639, 712
LpnPI CCDG 6 cut(s) 138, 345, 452, 533, 639, 738
Lsp1109I GCAGC 3 cut(s) 154, 671, 757
LweI GCATC 2 cut(s) 165, 499
MaeII ACGT 1 cut(s) 610
MaeIII GTNAC 3 cut(s) 509, 533, 604
MalI GATC 4 cut(s) 203, 285, 381, 423
MbiI CCGCTC 1 cut(s) 399
MboI GATC 4 cut(s) 201, 283, 379, 421
MboII GAAGA 6 cut(s) 13, 119, 220, 374, 427, 826
MhlI GDGCHC 1 cut(s) 625
MluCI AATT 3 cut(s) 175, 640, 808
MlyI GAGTC 1 cut(s) 747
Mph1103I ATGCAT 1 cut(s) 223
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 6 cut(s) 264, 273, 368, 413, 500, 639
MslI CAYNNNNRTG 1 cut(s) 291
MspCI CTTAAG 1 cut(s) 272
MspI CCGG 1 cut(s) 725
MspR9I CCNGG 1 cut(s) 726
Mva1269I GAATGC 2 cut(s) 472, 529
MvnI CGCG 1 cut(s) 709
MwoI GCNNNNNNNGC 2 cut(s) 153, 274
NciI CCSGG 1 cut(s) 726
NdeI CATATG 1 cut(s) 279
NdeII GATC 4 cut(s) 201, 283, 379, 421
NlaIII CATG 3 cut(s) 174, 290, 592
NlaIV GGNNCC 2 cut(s) 617, 714
NmuCI GTSAC 1 cut(s) 533
NsiI ATGCAT 1 cut(s) 223
PagI TCATGA 2 cut(s) 286, 588
PceI AGGCCT 1 cut(s) 459
PcsI WCGNNNNNNNCGW 2 cut(s) 616, 713
PctI GAATGC 2 cut(s) 472, 529
PdmI GAANNNNTTC 1 cut(s) 17
PflFI GACNNNGTC 1 cut(s) 293
PkrI GCNGC 3 cut(s) 169, 661, 747
PleI GAGTC 1 cut(s) 747
PpsI GAGTC 1 cut(s) 747
Psp124BI GAGCTC 1 cut(s) 625
PspN4I GGNNCC 2 cut(s) 617, 714
PstI CTGCAG 1 cut(s) 661
PsyI GACNNNGTC 1 cut(s) 293
RsaI GTAC 2 cut(s) 486, 617
RsaNI GTAC 2 cut(s) 485, 616
RseI CAYNNNNRTG 1 cut(s) 291
SacI GAGCTC 1 cut(s) 625
SaqAI TTAA 6 cut(s) 264, 273, 368, 413, 500, 639
SatI GCNGC 3 cut(s) 168, 660, 746
Sau3AI GATC 4 cut(s) 201, 283, 379, 421
SchI GAGTC 1 cut(s) 747
ScrFI CCNGG 1 cut(s) 726
SduI GDGCHC 1 cut(s) 625
SetI ASST 8 cut(s) 270, 328, 540, 613, 625, 664, 750, 768
SfaNI GCATC 2 cut(s) 165, 499
SfcI CTRYAG 1 cut(s) 657
SmiMI CAYNNNNRTG 1 cut(s) 291
SmlI CTYRAG 3 cut(s) 272, 461, 539
SmoI CTYRAG 3 cut(s) 272, 461, 539
Sse9I AATT 3 cut(s) 175, 640, 808
SseBI AGGCCT 1 cut(s) 459
SsiI CCGC 2 cut(s) 397, 709
SstI GAGCTC 1 cut(s) 625
StuI AGGCCT 1 cut(s) 459
StyD4I CCNGG 1 cut(s) 724
TaaI ACNGT 3 cut(s) 411, 432, 533
TaiI ACGT 1 cut(s) 613
TaqI TCGA 2 cut(s) 237, 666
TasI AATT 3 cut(s) 175, 640, 808
TatI WGTACW 1 cut(s) 484
Tru1I TTAA 6 cut(s) 264, 273, 368, 413, 500, 639
Tru9I TTAA 6 cut(s) 264, 273, 368, 413, 500, 639
TscAI CASTG 3 cut(s) 382, 661, 766
TseFI GTSAC 1 cut(s) 533
TseI GCWGC 3 cut(s) 167, 659, 745
Tsp45I GTSAC 1 cut(s) 533
TspDTI ATGAA 1 cut(s) 577
TspRI CASTG 3 cut(s) 382, 661, 766
Tth111I GACNNNGTC 1 cut(s) 293
Vha464I CTTAAG 1 cut(s) 272
XapI RAATTY 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 688
XmnI GAANNNNTTC 1 cut(s) 17
Zsp2I ATGCAT 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.