Rh1AG268800

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
49584568 .. 49590728
6161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG268800.1

Sequence Viewer

Length: 843 bp
ATGGATCATGAAAATGTTATTGCCATTAAAGACATCATAAGGCCTCCACAGAAGGAGAACTTCAATGATGTTTACATTGTTTATGAATTAATGGACACCGACCTTCATCAGATAATACGCTCCAACCAAACTTTGACTGATGACCATTGCCGGTACTTTCTGTATCAGTTGTTACGAGGGCTCAAATATGTACATTCAGCAAGTGTTTTGCATCGTGATTTGAAGCCCAGCAATTTGCTCATGAATGCAAATTGTGATCTCAAGATAGGTGATTTTGGGCTTGCAAGGACAACATCTGAAACTGATTTCATGACCGAATATGTTGTTACTCGTTGGTACCGTGCTCCGGAGTTGCTCCTTAATTGCTCAGAGTACACTGCAGCAATTGATATATGGTCTGTAGGTTGCATTCTAGGTGAAATCATGACCAGACGGCCCCTATTCCCTGGCAAAGATTATGTGCATCAGCTGAGACTCATTACAGAGCTAATAGGTTCACCTGATGATTCAAGCCTTGGATTTTTACGAAGTGATAATGCCCGAAGATATGTTCGACAACTACCTCAGTATGCAAAGAAGGACTTCTCCGTTGGATTTCCTAATATGTCTGCTGGTGCTGTTGATTTGCTAGAGAAGATGCTTATCTTTGACCCAAACAGGCGCATTACAGTTGATGAGGCTCTTTGCCACCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCTGTCTGCCCAAGTCCTTTCAGTTTTGACTTTGAGCAACCATCGTTTACTGAAGAGAACATCAAGGAACTCATATGGAGAGAGACAGTAAAGTTCAATCCAGATCCAATTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006971 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009504 GO:0009555 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009861 GO:0009862 GO:0009863 GO:0009867 GO:0009868 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0014070 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031122 GO:0032260 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032870 GO:0033206 GO:0033993 GO:0035556 GO:0035690 GO:0035821 GO:0036211 GO:0042221 GO:0042493 GO:0042539 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045087 GO:0046677 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051321 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052306 GO:0052308 GO:0052552 GO:0052553 GO:0052564 GO:0052572 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071840 GO:0075136 GO:0080026 GO:0097305 GO:0097435 GO:0098542 GO:0140013 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:1901701 GO:1902410 GO:1903046 GO:1903047
KEGG Pathways
Metabolic & Signaling
ko01521 ko01522 ko01524 ko04010 ko04011 ko04012 ko04013 ko04014 ko04015 ko04016 ko04022 ko04024 ko04062 ko04066 ko04068 ko04071 ko04072 ko04114 ko04138 ko04139 ko04140 ko04150 ko04151 ko04210 ko04214 ko04218 ko04261 ko04270 ko04320 ko04350 ko04360 ko04370 ko04371 ko04380 ko04510 ko04520 ko04540 ko04550 ko04611 ko04620 ko04621 ko04650 ko04657 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko04668 ko04713 ko04720 ko04722 ko04723 ko04724 ko04725 ko04726 ko04730 ko04810 ko04910 ko04912 ko04914 ko04915 ko04916 ko04917 ko04919 ko04921 ko04926 ko04930 ko04933 ko04934 ko04960 ko05010 ko05020 ko05034 ko05131 ko05132 ko05133 ko05140 ko05142 ko05145 ko05152 ko05160 ko05161 ko05164 ko05165 ko05167 ko05200 ko05203 ko05205 ko05206 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 ko05230 ko05231 ko05418 map01521 map01522 map01524 map04010 map04011 map04012 map04013 map04014 map04015 map04016 map04022 map04024 map04062 map04066 map04068 map04071 map04072 map04114 map04138 map04139 map04140 map04150 map04151 map04210 map04214 map04218 map04261 map04270 map04320 map04350 map04360 map04370 map04371 map04380 map04510 map04520 map04540 map04550 map04611 map04620 map04621 map04650 map04657 map04658 map04659 map04660 map04662 map04664 map04666 map04668 map04713 map04720 map04722 map04723 map04724 map04725 map04726 map04730 map04810 map04910 map04912 map04914 map04915 map04916 map04917 map04919 map04921 map04926 map04930 map04933 map04934 map04960 map05010 map05020 map05034 map05131 map05132 map05133 map05140 map05142 map05145 map05152 map05160 map05161 map05164 map05165 map05167 map05200 map05203 map05205 map05206 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226 map05230 map05231 map05418
Pfam Domains
Protein Families

Protein Analysis

280

Amino Acids

32.48

Weight (kDa)

5.12

Isoelectric Point (pI)

45.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 1 - 233 4.4e-54 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2 - 144 1e-22 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 2 cut(s) 336, 700
AccIII TCCGGA 1 cut(s) 346
AclWI GGATC 2 cut(s) 12, 824
AcuI CTGAAG 1 cut(s) 798
AfaI GTAC 4 cut(s) 155, 192, 338, 374
AfiI CCNNNNNNNGG 2 cut(s) 346, 697
AgsI TTSAA 4 cut(s) 64, 223, 510, 823
AjnI CCWGG 1 cut(s) 445
AluBI AGCT 2 cut(s) 469, 487
AluI AGCT 2 cut(s) 469, 487
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 2 cut(s) 466, 803
AlwI GGATC 2 cut(s) 12, 824
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 2 cut(s) 41, 434
ApeKI GCWGC 1 cut(s) 380
AseI ATTAAT 1 cut(s) 89
Asp700I GAANNNNTTC 1 cut(s) 581
Asp718I GGTACC 1 cut(s) 336
AspLEI GCGC 1 cut(s) 663
AspS9I GGNCC 1 cut(s) 435
AsuHPI GGTGA 3 cut(s) 281, 428, 489
BanI GGYRCC 2 cut(s) 336, 700
BanII GRGCYC 1 cut(s) 183
Bbv12I GWGCWC 1 cut(s) 346
BbvI GCAGC 1 cut(s) 392
BccI CCATC 1 cut(s) 775
BceAI ACGGC 1 cut(s) 449
BciT130I CCWGG 1 cut(s) 447
BcoDI GTCTC 2 cut(s) 466, 803
BfaI CTAG 2 cut(s) 413, 629
BfmI CTRYAG 2 cut(s) 378, 399
BisI GCNGC 1 cut(s) 381
BlsI GCNGC 1 cut(s) 382
Bme1390I CCNGG 1 cut(s) 447
BmgT120I GGNCC 1 cut(s) 435
BmiI GGNNCC 4 cut(s) 338, 437, 702, 726
BmrFI CCNGG 1 cut(s) 447
BmsI GCATC 3 cut(s) 220, 472, 627
BpuEI CTTGAG 1 cut(s) 245
BsaBI GATNNNNATC 1 cut(s) 641
BsaJI CCNNGG 2 cut(s) 445, 514
BsaWI WCCGGW 1 cut(s) 346
Bsc4I CCNNNNNNNGG 2 cut(s) 346, 697
Bse118I RCCGGY 1 cut(s) 150
Bse3DI GCAATG 1 cut(s) 145
Bse8I GATNNNNATC 1 cut(s) 641
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 1 cut(s) 447
BseDI CCNNGG 2 cut(s) 445, 514
BseJI GATNNNNATC 1 cut(s) 641
BseLI CCNNNNNNNGG 2 cut(s) 346, 697
BseMI GCAATG 1 cut(s) 145
BseMII CTCAG 3 cut(s) 381, 461, 578
BseRI GAGGAG 1 cut(s) 737
BseXI GCAGC 1 cut(s) 392
BseYI CCCAGC 1 cut(s) 227
BshFI GGCC 2 cut(s) 43, 436
BshNI GGYRCC 2 cut(s) 336, 700
BsiHKAI GWGCWC 1 cut(s) 346
BsiSI CCGG 2 cut(s) 151, 347
BslI CCNNNNNNNGG 2 cut(s) 346, 697
BsmAI GTCTC 2 cut(s) 466, 803
BsmI GAATGC 2 cut(s) 250, 408
BsnI GGCC 2 cut(s) 43, 436
Bsp1286I GDGCHC 2 cut(s) 183, 346
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 190
Bsp143I GATC 3 cut(s) 4, 256, 829
BspANI GGCC 2 cut(s) 43, 436
BspCNI CTCAG 3 cut(s) 380, 462, 577
BspEI TCCGGA 1 cut(s) 346
BspHI TCATGA 5 cut(s) 7, 240, 309, 423, 709
BspLI GGNNCC 4 cut(s) 338, 437, 702, 726
BspMAI CTGCAG 1 cut(s) 382
BspPI GGATC 2 cut(s) 12, 824
BspT107I GGYRCC 2 cut(s) 336, 700
BsrDI GCAATG 1 cut(s) 145
BsrFI RCCGGY 1 cut(s) 150
BsrGI TGTACA 1 cut(s) 190
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 2 cut(s) 445, 514
BssMI GATC 3 cut(s) 4, 256, 829
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 1 cut(s) 447
Bst4CI ACNGT 3 cut(s) 341, 670, 814
Bst6I CTCTTC 2 cut(s) 711, 774
BstAUI TGTACA 1 cut(s) 190
BstC8I GCNNGC 1 cut(s) 282
BstDEI CTNAG 3 cut(s) 367, 470, 564
BstHHI GCGC 1 cut(s) 663
BstKTI GATC 3 cut(s) 7, 259, 832
BstMAI GTCTC 2 cut(s) 466, 803
BstMBI GATC 3 cut(s) 4, 256, 829
BstNI CCWGG 1 cut(s) 447
BstSCI CCNGG 1 cut(s) 445
BstSFI CTRYAG 2 cut(s) 378, 399
BstV1I GCAGC 1 cut(s) 392
BstX2I RGATCY 1 cut(s) 829
BstYI RGATCY 1 cut(s) 829
BsuRI GGCC 2 cut(s) 43, 436
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 1 cut(s) 375
Cac8I GCNNGC 1 cut(s) 282
CciI TCATGA 5 cut(s) 7, 240, 309, 423, 709
CfoI GCGC 1 cut(s) 663
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 1 cut(s) 435
Csp6I GTAC 4 cut(s) 154, 191, 337, 373
CviAII CATG 5 cut(s) 8, 241, 310, 424, 710
CviQI GTAC 4 cut(s) 154, 191, 337, 373
DdeI CTNAG 3 cut(s) 367, 470, 564
DpnI GATC 3 cut(s) 6, 258, 831
DpnII GATC 3 cut(s) 4, 256, 829
Eam1104I CTCTTC 2 cut(s) 711, 774
EarI CTCTTC 2 cut(s) 711, 774
Eco130I CCWWGG 1 cut(s) 514
Eco147I AGGCCT 1 cut(s) 43
Eco24I GRGCYC 1 cut(s) 183
Eco32I GATATC 1 cut(s) 715
Eco57I CTGAAG 1 cut(s) 798
EcoRII CCWGG 1 cut(s) 445
EcoRV GATATC 1 cut(s) 715
EcoT14I CCWWGG 1 cut(s) 514
EcoT38I GRGCYC 1 cut(s) 183
ErhI CCWWGG 1 cut(s) 514
FaeI CATG 5 cut(s) 11, 244, 313, 427, 713
FalI AAGNNNNNCTT 4 cut(s) 44, 76, 566, 598
FatI CATG 5 cut(s) 7, 240, 309, 423, 709
FauNDI CATATG 1 cut(s) 800
Fnu4HI GCNGC 1 cut(s) 381
FriOI GRGCYC 1 cut(s) 183
Fsp4HI GCNGC 1 cut(s) 381
FspBI CTAG 2 cut(s) 413, 629
GlaI GCGC 1 cut(s) 662
GluI GCNGC 1 cut(s) 381
GsaI CCCAGC 1 cut(s) 231
HaeIII GGCC 2 cut(s) 43, 436
HapII CCGG 2 cut(s) 151, 347
HhaI GCGC 1 cut(s) 663
Hin1II CATG 5 cut(s) 11, 244, 313, 427, 713
Hin6I GCGC 1 cut(s) 661
HinP1I GCGC 1 cut(s) 661
HinfI GANTC 2 cut(s) 474, 506
HpaII CCGG 2 cut(s) 151, 347
HphI GGTGA 3 cut(s) 281, 428, 489
Hpy166II GTNNAC 4 cut(s) 73, 375, 497, 774
Hpy188I TCNGA 3 cut(s) 111, 298, 370
Hpy188III TCNNGA 9 cut(s) 8, 215, 241, 262, 310, 347, 424, 710, 827
Hpy8I GTNNAC 4 cut(s) 73, 375, 497, 774
HpyAV CCTTC 3 cut(s) 46, 113, 571
HpyCH4III ACNGT 3 cut(s) 341, 670, 814
HpyCH4V TGCA 7 cut(s) 211, 248, 284, 380, 408, 463, 572
HpyF3I CTNAG 3 cut(s) 367, 470, 564
Hsp92II CATG 5 cut(s) 11, 244, 313, 427, 713
HspAI GCGC 1 cut(s) 661
Kpn2I TCCGGA 1 cut(s) 346
KpnI GGTACC 1 cut(s) 340
Kzo9I GATC 3 cut(s) 4, 256, 829
LmnI GCTCC 4 cut(s) 125, 349, 360, 724
Lsp1109I GCAGC 1 cut(s) 392
LweI GCATC 3 cut(s) 220, 472, 627
MaeI CTAG 2 cut(s) 413, 629
MaeIII GTNAC 2 cut(s) 171, 325
MalI GATC 3 cut(s) 6, 258, 831
MboI GATC 3 cut(s) 4, 256, 829
MboII GAAGA 4 cut(s) 555, 646, 698, 791
MfeI CAATTG 1 cut(s) 384
MflI RGATCY 1 cut(s) 829
MhlI GDGCHC 2 cut(s) 183, 346
MluCI AATT 6 cut(s) 86, 232, 250, 361, 384, 834
MlyI GAGTC 1 cut(s) 468
MmeI TCCRAC 2 cut(s) 147, 571
MnlI CCTC 6 cut(s) 54, 170, 573, 670, 714, 715
MroI TCCGGA 1 cut(s) 346
MroXI GAANNNNTTC 1 cut(s) 581
MseI TTAA 3 cut(s) 27, 89, 360
MslI CAYNNNNRTG 1 cut(s) 12
MspA1I CMGCKG 1 cut(s) 469
MspI CCGG 2 cut(s) 151, 347
MspR9I CCNGG 1 cut(s) 447
MunI CAATTG 1 cut(s) 384
Mva1269I GAATGC 2 cut(s) 250, 408
MvaI CCWGG 1 cut(s) 447
NdeI CATATG 1 cut(s) 800
NdeII GATC 3 cut(s) 4, 256, 829
NlaIII CATG 5 cut(s) 11, 244, 313, 427, 713
NlaIV GGNNCC 4 cut(s) 338, 437, 702, 726
PagI TCATGA 5 cut(s) 7, 240, 309, 423, 709
PceI AGGCCT 1 cut(s) 43
PcsI WCGNNNNNNNCGW 1 cut(s) 337
PctI GAATGC 2 cut(s) 250, 408
PdmI GAANNNNTTC 1 cut(s) 581
PfeI GAWTC 1 cut(s) 506
PkrI GCNGC 1 cut(s) 382
PleI GAGTC 1 cut(s) 468
PpsI GAGTC 1 cut(s) 468
PshBI ATTAAT 1 cut(s) 89
Psp6I CCWGG 1 cut(s) 445
PspFI CCCAGC 1 cut(s) 227
PspGI CCWGG 1 cut(s) 445
PspN4I GGNNCC 4 cut(s) 338, 437, 702, 726
PspPI GGNCC 1 cut(s) 435
PstI CTGCAG 1 cut(s) 382
PsuI RGATCY 1 cut(s) 829
PvuII CAGCTG 1 cut(s) 469
RsaI GTAC 4 cut(s) 155, 192, 338, 374
RsaNI GTAC 4 cut(s) 154, 191, 337, 373
RseI CAYNNNNRTG 1 cut(s) 12
SaqAI TTAA 3 cut(s) 27, 89, 360
SatI GCNGC 1 cut(s) 381
Sau3AI GATC 3 cut(s) 4, 256, 829
Sau96I GGNCC 1 cut(s) 435
SchI GAGTC 1 cut(s) 468
ScrFI CCNGG 1 cut(s) 447
SduI GDGCHC 2 cut(s) 183, 346
SfaNI GCATC 3 cut(s) 220, 472, 627
SfcI CTRYAG 2 cut(s) 378, 399
SmiMI CAYNNNNRTG 1 cut(s) 12
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
Sse9I AATT 6 cut(s) 86, 232, 250, 361, 384, 834
SseBI AGGCCT 1 cut(s) 43
SspMI CTAG 2 cut(s) 413, 629
StuI AGGCCT 1 cut(s) 43
StyD4I CCNGG 1 cut(s) 445
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 3 cut(s) 341, 670, 814
TaqI TCGA 1 cut(s) 553
TaqII GACCGA 1 cut(s) 329
TasI AATT 6 cut(s) 86, 232, 250, 361, 384, 834
TatI WGTACW 2 cut(s) 190, 372
TfiI GAWTC 1 cut(s) 506
Tru1I TTAA 3 cut(s) 27, 89, 360
Tru9I TTAA 3 cut(s) 27, 89, 360
TscAI CASTG 1 cut(s) 382
TseI GCWGC 1 cut(s) 380
TspDTI ATGAA 6 cut(s) 24, 95, 99, 257, 298, 698
TspGWI ACGGA 1 cut(s) 577
TspRI CASTG 1 cut(s) 382
VspI ATTAAT 1 cut(s) 89
XmnI GAANNNNTTC 1 cut(s) 581
XspI CTAG 2 cut(s) 413, 629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.