AT1G05100
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012850
Physical Location & Seq
Forward (+)
1469541 .. 1470881
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G05100.1

Sequence Viewer

Length: 1020 bp
ATGAATTGGACTAGAGGAAAAACTTTAGGCCGTGGCTCAACGGCCACCGTTTCCGCCGCCACTTGTCACGAATCCGGCGAAACACTCGCCGTAAAATCCGCCGAGTTTCACCGGTCGGAGTTCTTGCAAAGAGAAGCCAAGATTCTCTCCTCATTAAACTCTCCGTACGTCATCGGATACAGAGGATGCGAAATTACGAGAGAGCCCTTCCACAACAACGGAGAAGCTACGACTTACAGTCTTCTTATGGAGTACGCGCCGTACGGAACGTTGACCGACGTAGCGACCAAGAACGGCGGCTTCATTGACGAGGCTCGGGTCGTGAAGTACACGCGCCAGATACTTCTTGGGTTGGAGTACATTCATAACTCAAAGGGAATTGCGCATTGCGACATTAAGGGAAGCAACGTGTTGGTCGGAGAGAACGGAGAAGCCAAGATCGCTGATTTCGGGTGTGCGAAATGGGTTGAACCGGAAATAACCGAACCGGTTAGAGGAACGCCGGCGTTCATGGCTCCAGAAGCGGCGCGTGGAGAGAGACAAGGGAAAGAGAGTGATATATGGGCGGTGGGTTGTACGGTGATAGAGATGGTTACCGGGTCTCAGCCGTGGATTGGGGCGGATTTTACCGACCCGGTTTCGGTTCTTTACCGGGTCGGATATTTAGGTGAGTTACCAGAGCTGCCTTGCTCGCTTACGGAACAAGCAAAGGATTTTTTAGGAAAGTGTTTGAAAAAAGAAGCGACGGAGAGATGGACAGCGAGTCAACTACTAAACCATCCGTTCTTGGTTAATAAAGAACCGGAATTGGTAACCGGTTTGGTTACGAACTCACCGACAAGTGTGACGGATCAAATGTTCTGGAGATCAGTGGAAGAGGAGGTGTCAGAGGACCGTTCAAGCTGGTGGGAATGTCACGAGGATGAGAGAATTGGAGTGCTAAGCTGGATTGGTCATGTTGTGGTGGAGTCCACATGGGACTTGGACGGTGAGGATTGGATCACGGTTCGACGGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010119 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0032870 GO:0033554 GO:0033674 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048831 GO:0048856 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0097305 GO:0097306 GO:0099120 GO:0099568 GO:0140096 GO:1900055 GO:1900057 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1902456 GO:1902457 GO:1905623 GO:1905957 GO:1905959 GO:2000024 GO:2000026 GO:2000038
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

339

Amino Acids

37.74

Weight (kDa)

4.98

Isoelectric Point (pI)

39.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 263 1.3e-55 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 259 1.2e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012850)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05100 AT2G32510
fragaria_vesca FvH4_6g42900
malus_domestica MD09G1111000.v1.1 MD17G1098800.v1.1
prunus_persica Prupe.3G215000_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0158821
rosa_laevigata RLG00000021116
rosa_multiflora Rmu_co8475471.1_g000001
rosa_roxburghii Rroxscaffold_2G00090970
rosa_rugosa Rorug02G0472800
rosa_samantha Rh2AG538600 Rh2AG538700 Rh2BG551300 Rh2CG521900 Rh2CG522000 Rh2DG561100
rosa_wichuraiana Rw2G044580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 384
AccII CGCG 3 cut(s) 257, 334, 529
AciI CCGC 7 cut(s) 54, 57, 99, 297, 524, 566, 620
AclI AACGTT 1 cut(s) 269
AclWI GGATC 2 cut(s) 858, 1007
AcoI YGGCCR 1 cut(s) 42
AfaI GTAC 6 cut(s) 167, 254, 263, 329, 359, 577
AfiI CCNNNNNNNGG 3 cut(s) 494, 614, 640
AflIII ACRYGT 1 cut(s) 408
AgeI ACCGGT 3 cut(s) 111, 487, 815
AgsI TTSAA 3 cut(s) 470, 733, 900
AhdI GACNNNNNGTC 2 cut(s) 237, 762
AloI GAACNNNNNNTCC 2 cut(s) 842, 874
AluBI AGCT 4 cut(s) 227, 682, 903, 945
AluI AGCT 4 cut(s) 227, 682, 903, 945
Alw26I GTCTC 2 cut(s) 532, 606
AlwI GGATC 2 cut(s) 858, 1007
Ama87I CYCGRG 1 cut(s) 315
AoxI GGCC 2 cut(s) 28, 42
ApeKI GCWGC 1 cut(s) 682
AsiGI ACCGGT 3 cut(s) 111, 487, 815
AspLEI GCGC 4 cut(s) 259, 336, 385, 529
AspS9I GGNCC 1 cut(s) 892
AsuC2I CCSGG 3 cut(s) 598, 635, 653
AsuHPI GGTGA 5 cut(s) 101, 592, 680, 825, 1001
AvaI CYCGRG 1 cut(s) 315
AvaII GGWCC 1 cut(s) 892
BanII GRGCYC 1 cut(s) 207
BauI CACGAG 1 cut(s) 917
BbsI GAAGAC 1 cut(s) 233
BbvI GCAGC 1 cut(s) 669
BccI CCATC 3 cut(s) 583, 747, 786
BceAI ACGGC 6 cut(s) 15, 57, 74, 244, 310, 592
BciVI GTATCC 1 cut(s) 170
BcnI CCSGG 3 cut(s) 598, 635, 653
BcoDI GTCTC 2 cut(s) 532, 606
BfaI CTAG 1 cut(s) 12
BfuI GTATCC 1 cut(s) 170
BisI GCNGC 4 cut(s) 57, 298, 525, 683
BlpI GCTNAGC 1 cut(s) 941
BlsI GCNGC 4 cut(s) 58, 299, 526, 684
Bme1390I CCNGG 3 cut(s) 598, 635, 653
Bme18I GGWCC 1 cut(s) 892
BmeRI GACNNNNNGTC 2 cut(s) 237, 762
BmeT110I CYCGRG 1 cut(s) 315
BmgT120I GGNCC 1 cut(s) 892
BmiI GGNNCC 1 cut(s) 516
BmrFI CCNGG 3 cut(s) 598, 635, 653
BmsI GCATC 1 cut(s) 176
BpiI GAAGAC 1 cut(s) 233
BpmI CTGGAG 2 cut(s) 501, 883
Bpu1102I GCTNAGC 1 cut(s) 941
BpuMI CCSGG 3 cut(s) 598, 635, 653
BsaI GGTCTC 1 cut(s) 606
BsaJI CCNNGG 2 cut(s) 31, 608
BsaWI WCCGGW 5 cut(s) 111, 472, 487, 802, 815
Bsc4I CCNNNNNNNGG 3 cut(s) 494, 614, 640
Bse118I RCCGGY 4 cut(s) 111, 487, 502, 815
Bse3DI GCAATG 1 cut(s) 385
BseDI CCNNGG 2 cut(s) 31, 608
BseGI GGATG 3 cut(s) 191, 778, 928
BseLI CCNNNNNNNGG 3 cut(s) 494, 614, 640
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 1 cut(s) 617
BseRI GAGGAG 2 cut(s) 139, 893
BseXI GCAGC 1 cut(s) 669
Bsh1236I CGCG 3 cut(s) 257, 334, 529
Bsh1285I CGRYCG 1 cut(s) 116
BshFI GGCC 2 cut(s) 30, 44
BshTI ACCGGT 3 cut(s) 111, 487, 815
BsiEI CGRYCG 1 cut(s) 116
BsiHKCI CYCGRG 1 cut(s) 315
BsiWI CGTACG 2 cut(s) 165, 261
BslFI GGGAC 1 cut(s) 992
BslI CCNNNNNNNGG 3 cut(s) 494, 614, 640
BsmAI GTCTC 2 cut(s) 532, 606
BsmFI GGGAC 1 cut(s) 992
BsnI GGCC 2 cut(s) 30, 44
Bso31I GGTCTC 1 cut(s) 606
BsoBI CYCGRG 1 cut(s) 315
Bsp1286I GDGCHC 1 cut(s) 207
Bsp143I GATC 4 cut(s) 438, 850, 866, 999
Bsp1720I GCTNAGC 1 cut(s) 941
BspACI CCGC 7 cut(s) 54, 57, 99, 297, 524, 566, 620
BspANI GGCC 2 cut(s) 30, 44
BspCNI CTCAG 1 cut(s) 616
BspFNI CGCG 3 cut(s) 257, 334, 529
BspLI GGNNCC 1 cut(s) 516
BspPI GGATC 2 cut(s) 858, 1007
BspTNI GGTCTC 1 cut(s) 606
BsrDI GCAATG 1 cut(s) 385
BsrFI RCCGGY 4 cut(s) 111, 487, 502, 815
BssAI RCCGGY 4 cut(s) 111, 487, 502, 815
BssECI CCNNGG 2 cut(s) 31, 608
BssMI GATC 4 cut(s) 438, 850, 866, 999
BssSI CACGAG 1 cut(s) 917
Bst2BI CACGAG 1 cut(s) 917
Bst4CI ACNGT 6 cut(s) 49, 239, 580, 896, 989, 1006
Bst6I CTCTTC 1 cut(s) 870
BstC8I GCNNGC 2 cut(s) 504, 692
BstDEI CTNAG 2 cut(s) 603, 941
BstDSI CCRYGG 2 cut(s) 31, 608
BstEII GGTNACC 2 cut(s) 592, 811
BstF5I GGATG 3 cut(s) 191, 778, 928
BstFNI CGCG 3 cut(s) 257, 334, 529
BstHHI GCGC 4 cut(s) 259, 336, 385, 529
BstKTI GATC 4 cut(s) 441, 853, 869, 1002
BstMAI GTCTC 2 cut(s) 532, 606
BstMBI GATC 4 cut(s) 438, 850, 866, 999
BstMCI CGRYCG 1 cut(s) 116
BstMWI GCNNNNNNNGC 4 cut(s) 440, 512, 521, 691
BstPI GGTNACC 2 cut(s) 592, 811
BstSCI CCNGG 3 cut(s) 596, 633, 651
BstUI CGCG 3 cut(s) 257, 334, 529
BstV1I GCAGC 1 cut(s) 669
BstV2I GAAGAC 1 cut(s) 233
BsuI GTATCC 1 cut(s) 170
BsuRI GGCC 2 cut(s) 30, 44
BtgI CCRYGG 2 cut(s) 31, 608
BtsCI GGATG 3 cut(s) 191, 778, 928
BtsIMutI CAGTG 1 cut(s) 876
Cac8I GCNNGC 2 cut(s) 504, 692
CfoI GCGC 4 cut(s) 259, 336, 385, 529
Cfr10I RCCGGY 4 cut(s) 111, 487, 502, 815
Cfr13I GGNCC 1 cut(s) 892
Csp6I GTAC 6 cut(s) 166, 253, 262, 328, 358, 576
CspAI ACCGGT 3 cut(s) 111, 487, 815
CviAII CATG 3 cut(s) 511, 956, 975
CviQI GTAC 6 cut(s) 166, 253, 262, 328, 358, 576
DdeI CTNAG 2 cut(s) 603, 941
DpnI GATC 4 cut(s) 440, 852, 868, 1001
DpnII GATC 4 cut(s) 438, 850, 866, 999
DriI GACNNNNNGTC 2 cut(s) 237, 762
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 1 cut(s) 870
Eam1105I GACNNNNNGTC 2 cut(s) 237, 762
EarI CTCTTC 1 cut(s) 870
EciI GGCGGA 3 cut(s) 43, 88, 635
Eco24I GRGCYC 1 cut(s) 207
Eco31I GGTCTC 1 cut(s) 606
Eco47I GGWCC 1 cut(s) 892
Eco88I CYCGRG 1 cut(s) 315
Eco91I GGTNACC 2 cut(s) 592, 811
EcoO65I GGTNACC 2 cut(s) 592, 811
EcoT38I GRGCYC 1 cut(s) 207
FaeI CATG 3 cut(s) 514, 959, 978
FaiI YATR 7 cut(s) 248, 366, 512, 560, 562, 957, 976
FaqI GGGAC 1 cut(s) 992
FatI CATG 3 cut(s) 510, 955, 974
Fnu4HI GCNGC 4 cut(s) 57, 298, 525, 683
FokI GGATG 3 cut(s) 198, 765, 935
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 4 cut(s) 57, 298, 525, 683
FspBI CTAG 1 cut(s) 12
FspI TGCGCA 1 cut(s) 384
GlaI GCGC 4 cut(s) 258, 335, 384, 528
GluI GCNGC 4 cut(s) 57, 298, 525, 683
GsuI CTGGAG 2 cut(s) 501, 883
HaeIII GGCC 2 cut(s) 30, 44
HhaI GCGC 4 cut(s) 259, 336, 385, 529
Hin1II CATG 3 cut(s) 514, 959, 978
Hin6I GCGC 4 cut(s) 257, 334, 383, 527
HinP1I GCGC 4 cut(s) 257, 334, 383, 527
HincII GTYRAC 2 cut(s) 273, 767
HindII GTYRAC 2 cut(s) 273, 767
HinfI GANTC 4 cut(s) 71, 142, 763, 968
HphI GGTGA 5 cut(s) 101, 592, 680, 825, 1001
Hpy166II GTNNAC 4 cut(s) 273, 330, 767, 972
Hpy188I TCNGA 5 cut(s) 118, 176, 419, 659, 889
Hpy188III TCNNGA 5 cut(s) 68, 322, 518, 862, 917
Hpy8I GTNNAC 4 cut(s) 273, 330, 767, 972
Hpy99I CGWCG 3 cut(s) 281, 748, 1014
HpyAV CCTTC 1 cut(s) 217
HpyCH4III ACNGT 6 cut(s) 49, 239, 580, 896, 989, 1006
HpyCH4IV ACGT 4 cut(s) 168, 269, 279, 408
HpyCH4V TGCA 1 cut(s) 127
HpyF10VI GCNNNNNNNGC 4 cut(s) 440, 512, 521, 691
HpyF3I CTNAG 2 cut(s) 603, 941
HpySE526I ACGT 4 cut(s) 168, 269, 279, 408
Hsp92II CATG 3 cut(s) 514, 959, 978
HspAI GCGC 4 cut(s) 257, 334, 383, 527
KroI GCCGGC 1 cut(s) 502
KroNI GCCGGC 1 cut(s) 504
Kzo9I GATC 4 cut(s) 438, 850, 866, 999
LmnI GCTCC 1 cut(s) 520
Lsp1109I GCAGC 1 cut(s) 669
LweI GCATC 1 cut(s) 176
MaeI CTAG 1 cut(s) 12
MaeII ACGT 4 cut(s) 168, 269, 279, 408
MaeIII GTNAC 7 cut(s) 65, 592, 672, 811, 823, 844, 914
MalI GATC 4 cut(s) 440, 852, 868, 1001
MboI GATC 4 cut(s) 438, 850, 866, 999
MboII GAAGA 2 cut(s) 233, 887
MhlI GDGCHC 1 cut(s) 207
MluCI AATT 6 cut(s) 4, 192, 378, 806, 930, 1015
MlyI GAGTC 2 cut(s) 772, 977
MmeI TCCRAC 4 cut(s) 96, 333, 397, 637
MreI CGCCGGCG 1 cut(s) 502
MroNI GCCGGC 1 cut(s) 502
MseI TTAA 3 cut(s) 155, 396, 792
MslI CAYNNNNRTG 1 cut(s) 921
MspR9I CCNGG 3 cut(s) 598, 635, 653
MvnI CGCG 3 cut(s) 257, 334, 529
MwoI GCNNNNNNNGC 4 cut(s) 440, 512, 521, 691
NaeI GCCGGC 1 cut(s) 504
NciI CCSGG 3 cut(s) 598, 635, 653
NdeII GATC 4 cut(s) 438, 850, 866, 999
NgoMIV GCCGGC 1 cut(s) 502
NlaIII CATG 3 cut(s) 514, 959, 978
NlaIV GGNNCC 1 cut(s) 516
NmeAIII GCCGAG 1 cut(s) 127
NmuCI GTSAC 3 cut(s) 65, 844, 914
NsbI TGCGCA 1 cut(s) 384
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 833
PdiI GCCGGC 1 cut(s) 504
PfeI GAWTC 2 cut(s) 71, 142
Pfl23II CGTACG 2 cut(s) 165, 261
PinAI ACCGGT 3 cut(s) 111, 487, 815
PkrI GCNGC 4 cut(s) 58, 299, 526, 684
PleI GAGTC 2 cut(s) 771, 976
PpsI GAGTC 2 cut(s) 771, 976
Psp1406I AACGTT 1 cut(s) 269
PspEI GGTNACC 2 cut(s) 592, 811
PspLI CGTACG 2 cut(s) 165, 261
PspN4I GGNNCC 1 cut(s) 516
PspPI GGNCC 1 cut(s) 892
RsaI GTAC 6 cut(s) 167, 254, 263, 329, 359, 577
RsaNI GTAC 6 cut(s) 166, 253, 262, 328, 358, 576
RseI CAYNNNNRTG 1 cut(s) 921
SaqAI TTAA 3 cut(s) 155, 396, 792
SatI GCNGC 4 cut(s) 57, 298, 525, 683
Sau3AI GATC 4 cut(s) 438, 850, 866, 999
Sau96I GGNCC 1 cut(s) 892
SchI GAGTC 2 cut(s) 772, 977
ScrFI CCNGG 3 cut(s) 598, 635, 653
SduI GDGCHC 1 cut(s) 207
SfaNI GCATC 1 cut(s) 176
SgrAI CRCCGGYG 1 cut(s) 502
SinI GGWCC 1 cut(s) 892
SmiMI CAYNNNNRTG 1 cut(s) 921
Sse9I AATT 6 cut(s) 4, 192, 378, 806, 930, 1015
SsiI CCGC 7 cut(s) 54, 57, 99, 297, 524, 566, 620
SspMI CTAG 1 cut(s) 12
StyD4I CCNGG 3 cut(s) 596, 633, 651
TaaI ACNGT 6 cut(s) 49, 239, 580, 896, 989, 1006
TaiI ACGT 4 cut(s) 171, 272, 282, 411
TaqI TCGA 1 cut(s) 1009
TaqII GACCGA 1 cut(s) 290
TasI AATT 6 cut(s) 4, 192, 378, 806, 930, 1015
TatI WGTACW 2 cut(s) 327, 357
TauI GCSGC 3 cut(s) 59, 300, 527
TfiI GAWTC 2 cut(s) 71, 142
Tru1I TTAA 3 cut(s) 155, 396, 792
Tru9I TTAA 3 cut(s) 155, 396, 792
TscAI CASTG 1 cut(s) 876
TseFI GTSAC 3 cut(s) 65, 844, 914
TseI GCWGC 1 cut(s) 682
Tsp45I GTSAC 3 cut(s) 65, 844, 914
TspDTI ATGAA 4 cut(s) 17, 292, 353, 499
TspGWI ACGGA 8 cut(s) 153, 234, 279, 441, 713, 761, 771, 863
TspRI CASTG 1 cut(s) 876
VpaK11BI GGWCC 1 cut(s) 892
XcmI CCANNNNNNNNNTGG 2 cut(s) 344, 979
XspI CTAG 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.