AT1G08590
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013993
Physical Location & Seq
Forward (+)
2718538 .. 2722280
3743 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08590.1

Sequence Viewer

Length: 3090 bp
ATGGCGATCCCTCGACTTTTCTTCCTCTTCTATTACATTGGTTTCGCTCTTTTCCCTTTTGTTTCTTCTGAAACATTTCAAAACTCCGAACAAGAGATCTTGTTGGCCTTCAAGTCAGACCTTTTTGATCCTTCAAATAATCTCCAAGATTGGAAGAGACCTGAGAATGCCACAACATTTTCTGAGTTGGTTCATTGTCATTGGACAGGAGTTCACTGTGATGCAAATGGCTATGTGGCTAAGCTTCTTCTCTCCAACATGAATCTCAGCGGAAACGTGTCAGATCAGATTCAGAGCTTCCCTTCTCTGCAAGCCCTTGATCTCAGCAATAACGCATTTGAGTCTTCTCTTCCTAAATCTCTTTCTAATCTCACGTCTTTGAAGGTCATTGATGTGAGTGTGAACAGCTTCTTTGGAACCTTCCCTTATGGTCTAGGAATGGCAACTGGTCTTACACACGTCAATGCCTCAAGCAACAATTTTTCGGGGTTTCTACCTGAAGATCTTGGCAACGCAACTACACTTGAGGTTTTGGACTTTCGAGGAGGTTACTTCGAGGGCTCAGTGCCTTCTTCTTTCAAGAATCTCAAGAATCTGAAGTTTCTCGGTCTTTCGGGTAACAACTTTGGTGGAAAGGTACCGAAGGTGATTGGTGAGCTCTCTTCCTTGGAGACCATTATTCTTGGTTACAATGGCTTCATGGGTGAGATTCCAGAAGAGTTTGGGAAATTGACGCGCCTTCAGTACCTTGATTTGGCTGTTGGAAACCTTACAGGCCAGATTCCATCTTCTTTGGGGCAGCTGAAACAACTTACAACAGTTTATCTCTACCAGAACCGTCTCACAGGGAAACTTCCTCGAGAACTTGGTGGTATGACTTCTCTTGTGTTTCTTGATCTGTCTGATAACCAGATCACAGGAGAAATACCTATGGAAGTAGGTGAGTTGAAGAATCTGCAGCTTCTAAATTTGATGAGGAATCAACTCACGGGAATCATTCCGTCAAAAATTGCTGAATTACCAAACCTTGAGGTTCTTGAGCTGTGGCAGAACTCTCTCATGGGTTCATTACCGGTGCATCTCGGCAAAAATTCCCCATTGAAGTGGTTAGACGTCTCATCAAACAAGCTTTCAGGAGATATACCATCAGGATTGTGCTATTCCAGAAACCTCACAAAGCTCATTCTCTTCAACAACTCATTCTCAGGTCAGATTCCGGAGGAAATCTTCTCATGTCCGACTTTAGTTCGTGTTCGAATCCAGAAAAATCACATTTCCGGATCTATACCAGCTGGTTCAGGTGACTTACCAATGCTTCAGCATCTAGAGCTCGCAAAAAACAACCTCACCGGTAAAATTCCAGATGATATAGCCTTATCCACATCACTCTCATTTATAGACATATCATTTAATCATCTCTCATCCCTATCTTCCTCCATTTTCTCAAGTCCTAATCTTCAAACCTTCATTGCCTCACATAACAACTTTGCCGGAAAAATTCCTAACCAGATTCAAGATCGTCCATCTTTGTCTGTCCTCGATCTTTCCTTCAACCATTTCTCAGGTGGAATCCCAGAAAGGATCGCTTCTTTTGAAAAACTTGTGAGTCTAAATCTCAAGAGCAACCAATTGGTTGGAGAAATCCCTAAGGCATTAGCCGGGATGCACATGTTAGCTGTTCTTGATCTCTCAAACAACTCTTTGACGGGGAATATACCAGCGGACTTGGGAGCTTCTCCAACACTGGAGATGTTAAACGTGTCATTCAACAAACTCGACGGACCCATTCCTTCAAACATGCTGTTTGCAGCCATAGACCCAAAAGACCTCGTGGGAAACAATGGCTTATGCGGTGGAGTTCTACCACCTTGCTCTAAGAGCCTAGCTTTGTCAGCAAAAGGCCGAAATCCAGGGAGAATTCACGTGAATCACGCAGTCTTCGGGTTCATTGTTGGAACTTCAGTCATCGTGGCTATGGGGATGATGTTCTTGGCAGGGAGATGGATATACACAAGATGGGATCTTTACAGCAACTTTGCTAGAGAGTATATATTCTGCAAGAAACCTCGGGAGGAATGGCCATGGAGACTCGTGGCTTTCCAGAGACTGTGCTTCACTGCAGGAGACATCTTATCACATATCAAAGAATCAAACATCATTGGAATGGGAGCCATAGGGATTGTTTACAAAGCAGAAGTCATGAGACGGCCATTACTCACTGTAGCTGTGAAAAAACTGTGGAGATCACCATCACCACAAAATGATATCGAAGATCATCATCAAGAAGAAGATGAAGAGGACGACATACTCAGAGAAGTGAACCTACTTGGTGGTCTACGACATAGAAACATTGTGAAGATTCTAGGTTACGTTCACAACGAGAGAGAAGTGATGATGGTATACGAGTACATGCCCAATGGAAACCTAGGAACTGCTTTGCATTCCAAAGATGAGAAATTCTTACTAAGAGATTGGCTCTCACGATACAATGTCGCCGTCGGAGTCGTTCAAGGTCTCAATTACTTGCACAACGATTGCTATCCTCCGATCATTCACAGAGACATCAAGTCTAATAACATCCTCCTCGATTCAAACCTTGAAGCGAGGATAGCAGATTTCGGATTGGCGAAGATGATGCTTCATAAGAACGAGACCGTTTCTATGGTGGCTGGATCTTACGGGTATATAGCGCCGGAGTACGGATACACACTGAAGATTGACGAAAAGAGTGATATATACAGTCTAGGCGTTGTGCTTCTGGAATTGGTGACTGGGAAAATGCCGATAGATCCTTCGTTTGAGGATTCGATTGACGTGGTTGAGTGGATTCGGAGGAAGGTGAAGAAGAACGAGAGCTTGGAAGAAGTGATCGACGCGAGCATCGCCGGAGATTGTAAACACGTGATCGAAGAGATGCTCCTGGCACTGCGAATCGCTCTTCTCTGCACCGCGAAGCTACCGAAGGATAGACCATCGATTAGAGACGTCATCACAATGCTCGCGGAGGCGAAGCCACGCCGGAAAAGTGTTTGCCAAGTCGCCGGGGATTTGCCGATTTTCAGAAACTCGCCAGTGGTAGGGCTGATTTAG

Protein Analysis

1029

Amino Acids

113.82

Weight (kDa)

6.07

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 74 7.6e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 234 - 300 2.5e-07 Leucine-rich repeat region
LRR_8 PF13855 246 - 305 1.2e-07 Leucine rich repeat
LRR_14 PF23598 282 - 350 2.4e-06 Leucine-rich repeat region
LRR_8 PF13855 533 - 592 1.8e-07 Leucine rich repeat
Pkinase PF00069 716 - 973 1.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 716 - 999 2.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013993)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08590
fragaria_vesca FvH4_6g01540 FvH4_6g20240
malus_domestica MD00G1149400.v1.1 MD04G1232500.v1.1
prunus_persica Prupe.6G352100_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0449301
rosa_laevigata RLG00000025841
rosa_multiflora Rmu_sc0007719.1_g000004 Rmu_sc0018234.1_g000001
rosa_roxburghii Rroxscaffold_6G00427300
rosa_rugosa Rorug02G0619500
rosa_samantha Rh3AG017500 Rh3BG017600 Rh3CG016600 Rh3DG017900
rosa_wichuraiana Rw3G001340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1116, 2988
Acc65I GGTACC 1 cut(s) 637
AccB1I GGYRCC 1 cut(s) 637
AccI GTMKAC 2 cut(s) 2335, 2400
AccII CGCG 4 cut(s) 736, 2876, 2951, 3002
AccIII TCCGGA 2 cut(s) 1216, 1277
AciI CCGC 5 cut(s) 270, 1721, 1851, 2949, 3002
AclWI GGATC 6 cut(s) 122, 1288, 1589, 2028, 2680, 2783
AcoI YGGCCR 2 cut(s) 2078, 2207
AcsI RAATTY 6 cut(s) 967, 1090, 1356, 1497, 1917, 2456
AcuI CTGAAG 6 cut(s) 519, 617, 725, 1301, 1944, 2732
AcvI CACGTG 2 cut(s) 1924, 2902
AcyI GRCGYC 2 cut(s) 1113, 2985
AfaI GTAC 4 cut(s) 639, 746, 2408, 2699
AfiI CCNNNNNNNGG 3 cut(s) 754, 2699, 3077
AflIII ACRYGT 5 cut(s) 276, 457, 1668, 1758, 2899
AgeI ACCGGT 2 cut(s) 1072, 1349
AhdI GACNNNNNGTC 1 cut(s) 2566
AjiI CACGTC 3 cut(s) 375, 460, 2815
AjnI CCWGG 2 cut(s) 1909, 2919
AjuI GAANNNNNNNTTGG 2 cut(s) 2840, 2872
Alw21I GWGCWC 2 cut(s) 660, 1332
AlwI GGATC 6 cut(s) 122, 1288, 1589, 2028, 2680, 2783
AlwNI CAGNNNCTG 1 cut(s) 2107
Ama87I CYCGRG 2 cut(s) 858, 2067
Aor13HI TCCGGA 2 cut(s) 1216, 1277
AoxI GGCC 5 cut(s) 105, 775, 1900, 2078, 2207
ApeKI GCWGC 3 cut(s) 799, 958, 1808
ApoI RAATTY 6 cut(s) 967, 1090, 1356, 1497, 1917, 2456
ArsI GACNNNNNNTTYG 2 cut(s) 2181, 2213
AsiGI ACCGGT 2 cut(s) 1072, 1349
Asp700I GAANNNNTTC 2 cut(s) 75, 407
Asp718I GGTACC 1 cut(s) 637
AspA2I CCTAGG 1 cut(s) 2425
AspLEI GCGC 2 cut(s) 738, 2692
AspS9I GGNCC 1 cut(s) 1781
AsuC2I CCSGG 2 cut(s) 1660, 3043
AsuII TTCGAA 1 cut(s) 1255
AvaI CYCGRG 2 cut(s) 858, 2067
AvaII GGWCC 1 cut(s) 1781
AvrII CCTAGG 1 cut(s) 2425
AxyI CCTNAGG 1 cut(s) 1647
BalI TGGCCA 1 cut(s) 2080
BanI GGYRCC 1 cut(s) 637
BanII GRGCYC 3 cut(s) 563, 660, 1332
BarI GAAGNNNNNNTAC 2 cut(s) 2307, 2339
BauI CACGAG 2 cut(s) 1829, 2090
BbrPI CACGTG 2 cut(s) 1924, 2902
BbsI GAAGAC 2 cut(s) 336, 1930
Bbv12I GWGCWC 2 cut(s) 660, 1332
BbvI GCAGC 3 cut(s) 811, 970, 1820
BccI CCATC 8 cut(s) 793, 1153, 1531, 1995, 2010, 2257, 2389, 2980
BceAI ACGGC 2 cut(s) 2222, 2480
BcgI CGANNNNNNTGC 2 cut(s) 2617, 2651
BciT130I CCWGG 2 cut(s) 1911, 2921
BciVI GTATCC 1 cut(s) 2696
BcnI CCSGG 2 cut(s) 1660, 3043
BfaI CTAG 7 cut(s) 434, 1325, 1883, 2040, 2363, 2426, 2744
BfmI CTRYAG 3 cut(s) 956, 2118, 2220
BfoI RGCGCY 1 cut(s) 2693
BfuI GTATCC 1 cut(s) 2696
BglII AGATCT 2 cut(s) 96, 502
BisI GCNGC 3 cut(s) 800, 959, 1809
BlnI CCTAGG 1 cut(s) 2425
BlpI GCTNAGC 1 cut(s) 240
BlsI GCNGC 3 cut(s) 801, 960, 1810
Bme1390I CCNGG 4 cut(s) 1660, 1911, 2921, 3043
Bme18I GGWCC 1 cut(s) 1781
BmeRI GACNNNNNGTC 1 cut(s) 2566
BmeT110I CYCGRG 2 cut(s) 858, 2067
BmgBI CACGTC 3 cut(s) 375, 460, 2815
BmgT120I GGNCC 1 cut(s) 1781
BmiI GGNNCC 4 cut(s) 418, 639, 1783, 2170
BmrFI CCNGG 4 cut(s) 1660, 1911, 2921, 3043
BmrI ACTGGG 1 cut(s) 2781
BmsI GCATC 7 cut(s) 211, 1087, 1330, 1653, 2625, 2889, 2904
BmuI ACTGGG 1 cut(s) 2781
BpiI GAAGAC 2 cut(s) 336, 1930
BplI GAGNNNNNCTC 2 cut(s) 2460, 2492
BpmI CTGGAG 1 cut(s) 1766
Bpu1102I GCTNAGC 1 cut(s) 240
Bpu14I TTCGAA 1 cut(s) 1255
BpuEI CTTGAG 7 cut(s) 454, 545, 572, 1049, 1058, 1429, 1601
BpuMI CCSGG 2 cut(s) 1660, 3043
Bsa29I ATCGAT 1 cut(s) 2975
BsaAI YACGTR 2 cut(s) 1924, 2902
BsaBI GATNNNNATC 3 cut(s) 2248, 2277, 2538
BsaHI GRCGYC 2 cut(s) 1113, 2985
BsaI GGTCTC 4 cut(s) 151, 665, 2519, 2645
BsaJI CCNNGG 6 cut(s) 666, 1910, 2066, 2081, 2425, 3042
BsaWI WCCGGW 4 cut(s) 1072, 1216, 1277, 1349
Bsc4I CCNNNNNNNGG 3 cut(s) 754, 2699, 3077
Bse118I RCCGGY 2 cut(s) 1072, 1349
Bse1I ACTGG 4 cut(s) 451, 1749, 2776, 3071
Bse21I CCTNAGG 1 cut(s) 1647
Bse3DI GCAATG 1 cut(s) 1467
Bse8I GATNNNNATC 3 cut(s) 2248, 2277, 2538
BseAI TCCGGA 2 cut(s) 1216, 1277
BseBI CCWGG 2 cut(s) 1911, 2921
BseCI ATCGAT 1 cut(s) 2975
BseDI CCNNGG 6 cut(s) 666, 1910, 2066, 2081, 2425, 3042
BseGI GGATG 4 cut(s) 1421, 1668, 1986, 2577
BseJI GATNNNNATC 3 cut(s) 2248, 2277, 2538
BseLI CCNNNNNNNGG 3 cut(s) 754, 2699, 3077
BseMI GCAATG 1 cut(s) 1467
BseMII CTCAG 8 cut(s) 153, 174, 280, 337, 576, 1218, 1575, 2323
BseNI ACTGG 4 cut(s) 451, 1749, 2776, 3071
BseRI GAGGAG 2 cut(s) 558, 2573
BseXI GCAGC 3 cut(s) 811, 970, 1820
BsgI GTGCAG 1 cut(s) 2929
Bsh1236I CGCG 4 cut(s) 736, 2876, 2951, 3002
BshFI GGCC 5 cut(s) 107, 777, 1902, 2080, 2209
BshNI GGYRCC 1 cut(s) 637
BshTI ACCGGT 2 cut(s) 1072, 1349
BshVI ATCGAT 1 cut(s) 2975
BsiHKAI GWGCWC 2 cut(s) 660, 1332
BsiHKCI CYCGRG 2 cut(s) 858, 2067
BslI CCNNNNNNNGG 3 cut(s) 754, 2699, 3077
BsmBI CGTCTC 4 cut(s) 845, 1120, 2197, 2976
BsmI GAATGC 2 cut(s) 172, 2440
BsnI GGCC 5 cut(s) 107, 777, 1902, 2080, 2209
Bso31I GGTCTC 4 cut(s) 151, 665, 2519, 2645
BsoBI CYCGRG 2 cut(s) 858, 2067
Bsp119I TTCGAA 1 cut(s) 1255
Bsp1286I GDGCHC 3 cut(s) 563, 660, 1332
Bsp13I TCCGGA 2 cut(s) 1216, 1277
Bsp1720I GCTNAGC 1 cut(s) 240
Bsp19I CCATGG 1 cut(s) 2081
BspACI CCGC 5 cut(s) 270, 1721, 1851, 2949, 3002
BspANI GGCC 5 cut(s) 107, 777, 1902, 2080, 2209
BspCNI CTCAG 8 cut(s) 154, 175, 279, 336, 575, 1217, 1574, 2322
BspDI ATCGAT 1 cut(s) 2975
BspEI TCCGGA 2 cut(s) 1216, 1277
BspFNI CGCG 4 cut(s) 736, 2876, 2951, 3002
BspHI TCATGA 1 cut(s) 2199
BspLI GGNNCC 4 cut(s) 418, 639, 1783, 2170
BspMAI CTGCAG 2 cut(s) 960, 2122
BspPI GGATC 6 cut(s) 122, 1288, 1589, 2028, 2680, 2783
BspQI GCTCTTC 1 cut(s) 2943
BspT104I TTCGAA 1 cut(s) 1255
BspT107I GGYRCC 1 cut(s) 637
BspTNI GGTCTC 4 cut(s) 151, 665, 2519, 2645
BsrDI GCAATG 1 cut(s) 1467
BsrFI RCCGGY 2 cut(s) 1072, 1349
BsrI ACTGG 4 cut(s) 451, 1749, 2776, 3071
BssAI RCCGGY 2 cut(s) 1072, 1349
BssECI CCNNGG 6 cut(s) 666, 1910, 2066, 2081, 2425, 3042
BssNAI GTATAC 1 cut(s) 2401
BssNI GRCGYC 2 cut(s) 1113, 2985
BssSI CACGAG 2 cut(s) 1829, 2090
BssT1I CCWWGG 3 cut(s) 666, 2081, 2425
Bst1107I GTATAC 1 cut(s) 2401
Bst2BI CACGAG 2 cut(s) 1829, 2090
Bst2UI CCWGG 2 cut(s) 1911, 2921
Bst4CI ACNGT 8 cut(s) 218, 820, 839, 2109, 2221, 2238, 2656, 2741
Bst6I CTCTTC 9 cut(s) 32, 149, 354, 667, 711, 1193, 2289, 2904, 2943
BstACI GRCGYC 2 cut(s) 1113, 2985
BstBAI YACGTR 2 cut(s) 1924, 2902
BstBI TTCGAA 1 cut(s) 1255
BstC8I GCNNGC 4 cut(s) 312, 1332, 2878, 3000
BstDSI CCRYGG 1 cut(s) 2081
BstF5I GGATG 4 cut(s) 1421, 1668, 1986, 2577
BstFNI CGCG 4 cut(s) 736, 2876, 2951, 3002
BstH2I RGCGCY 1 cut(s) 2693
BstHHI GCGC 2 cut(s) 738, 2692
BstMWI GCNNNNNNNGC 5 cut(s) 1327, 1878, 1892, 2609, 2882
BstNI CCWGG 2 cut(s) 1911, 2921
BstNSI RCATGY 3 cut(s) 1672, 1801, 2413
BstSCI CCNGG 4 cut(s) 1658, 1909, 2919, 3041
BstSFI CTRYAG 3 cut(s) 956, 2118, 2220
BstUI CGCG 4 cut(s) 736, 2876, 2951, 3002
BstV1I GCAGC 3 cut(s) 811, 970, 1820
BstV2I GAAGAC 2 cut(s) 336, 1930
BstX2I RGATCY 6 cut(s) 96, 502, 1280, 2020, 2672, 2788
BstXI CCANNNNNNTGG 2 cut(s) 1104, 1634
BstYI RGATCY 6 cut(s) 96, 502, 1280, 2020, 2672, 2788
BstZ17I GTATAC 1 cut(s) 2401
Bsu15I ATCGAT 1 cut(s) 2975
Bsu36I CCTNAGG 1 cut(s) 1647
BsuI GTATCC 1 cut(s) 2696
BsuRI GGCC 5 cut(s) 107, 777, 1902, 2080, 2209
BsuTUI ATCGAT 1 cut(s) 2975
BtgI CCRYGG 1 cut(s) 2081
BtgZI GCGATG 1 cut(s) 2866
BtrI CACGTC 3 cut(s) 375, 460, 2815
BtsCI GGATG 4 cut(s) 1421, 1668, 1986, 2577
BtsI GCAGTG 2 cut(s) 2115, 2924
BtsIMutI CAGTG 8 cut(s) 214, 570, 1742, 2115, 2217, 2708, 2924, 3078
Cac8I GCNNGC 4 cut(s) 312, 1332, 2878, 3000
CaiI CAGNNNCTG 1 cut(s) 2107
CciI TCATGA 1 cut(s) 2199
CfoI GCGC 2 cut(s) 738, 2692
Cfr10I RCCGGY 2 cut(s) 1072, 1349
Cfr13I GGNCC 1 cut(s) 1781
ClaI ATCGAT 1 cut(s) 2975
CseI GACGC 2 cut(s) 742, 2882
Csp6I GTAC 4 cut(s) 638, 745, 2407, 2698
CspAI ACCGGT 2 cut(s) 1072, 1349
CspCI CAANNNNNGTGG 2 cut(s) 610, 645
CviAII CATG 9 cut(s) 259, 700, 1060, 1233, 1669, 1798, 2082, 2200, 2410
CviQI GTAC 4 cut(s) 638, 745, 2407, 2698
DriI GACNNNNNGTC 1 cut(s) 2566
EaeI YGGCCR 2 cut(s) 2078, 2207
Eam1104I CTCTTC 9 cut(s) 32, 149, 354, 667, 711, 1193, 2289, 2904, 2943
Eam1105I GACNNNNNGTC 1 cut(s) 2566
EarI CTCTTC 9 cut(s) 32, 149, 354, 667, 711, 1193, 2289, 2904, 2943
Ecl136II GAGCTC 2 cut(s) 658, 1330
Eco130I CCWWGG 3 cut(s) 666, 2081, 2425
Eco24I GRGCYC 3 cut(s) 563, 660, 1332
Eco31I GGTCTC 4 cut(s) 151, 665, 2519, 2645
Eco32I GATATC 1 cut(s) 2266
Eco47I GGWCC 1 cut(s) 1781
Eco53kI GAGCTC 2 cut(s) 658, 1330
Eco57I CTGAAG 6 cut(s) 519, 617, 725, 1301, 1944, 2732
Eco72I CACGTG 2 cut(s) 1924, 2902
Eco81I CCTNAGG 1 cut(s) 1647
Eco88I CYCGRG 2 cut(s) 858, 2067
EcoICRI GAGCTC 2 cut(s) 658, 1330
EcoRI GAATTC 1 cut(s) 1917
EcoRII CCWGG 2 cut(s) 1909, 2919
EcoRV GATATC 1 cut(s) 2266
EcoT14I CCWWGG 3 cut(s) 666, 2081, 2425
EcoT38I GRGCYC 3 cut(s) 563, 660, 1332
ErhI CCWWGG 3 cut(s) 666, 2081, 2425
Esp3I CGTCTC 4 cut(s) 845, 1120, 2197, 2976
FaeI CATG 9 cut(s) 262, 703, 1063, 1236, 1672, 1801, 2085, 2203, 2413
FalI AAGNNNNNCTT 2 cut(s) 1570, 1602
FatI CATG 9 cut(s) 258, 699, 1059, 1232, 1668, 1797, 2081, 2199, 2409
FblI GTMKAC 2 cut(s) 2335, 2400
Fnu4HI GCNGC 3 cut(s) 800, 959, 1809
FokI GGATG 4 cut(s) 1408, 1675, 1993, 2564
FriOI GRGCYC 3 cut(s) 563, 660, 1332
Fsp4HI GCNGC 3 cut(s) 800, 959, 1809
FspBI CTAG 7 cut(s) 434, 1325, 1883, 2040, 2363, 2426, 2744
GlaI GCGC 2 cut(s) 737, 2691
GluI GCNGC 3 cut(s) 800, 959, 1809
GsuI CTGGAG 1 cut(s) 1766
HaeII RGCGCY 1 cut(s) 2693
HaeIII GGCC 5 cut(s) 107, 777, 1902, 2080, 2209
HgaI GACGC 2 cut(s) 742, 2882
HhaI GCGC 2 cut(s) 738, 2692
Hin1I GRCGYC 2 cut(s) 1113, 2985
Hin1II CATG 9 cut(s) 262, 703, 1063, 1236, 1672, 1801, 2085, 2203, 2413
Hin6I GCGC 2 cut(s) 736, 2690
HinP1I GCGC 2 cut(s) 736, 2690
HindIII AAGCTT 2 cut(s) 242, 1127
Hpy166II GTNNAC 8 cut(s) 214, 403, 2185, 2320, 2336, 2374, 2401, 2897
Hpy8I GTNNAC 8 cut(s) 214, 403, 2185, 2320, 2336, 2374, 2401, 2897
Hpy99I CGWCG 3 cut(s) 1781, 2501, 2876
HpyCH4III ACNGT 8 cut(s) 218, 820, 839, 2109, 2221, 2238, 2656, 2741
HpyF10VI GCNNNNNNNGC 5 cut(s) 1327, 1878, 1892, 2609, 2882
Hsp92I GRCGYC 2 cut(s) 1113, 2985
Hsp92II CATG 9 cut(s) 262, 703, 1063, 1236, 1672, 1801, 2085, 2203, 2413
HspAI GCGC 2 cut(s) 736, 2690
Kpn2I TCCGGA 2 cut(s) 1216, 1277
KpnI GGTACC 1 cut(s) 641
LguI GCTCTTC 1 cut(s) 2943
LmnI GCTCC 3 cut(s) 1730, 2168, 2922
Lsp1109I GCAGC 3 cut(s) 811, 970, 1820
LweI GCATC 7 cut(s) 211, 1087, 1330, 1653, 2625, 2889, 2904
MaeI CTAG 7 cut(s) 434, 1325, 1883, 2040, 2363, 2426, 2744
MaeIII GTNAC 6 cut(s) 548, 617, 686, 1301, 2366, 2767
MfeI CAATTG 1 cut(s) 1628
MflI RGATCY 6 cut(s) 96, 502, 1280, 2020, 2672, 2788
MhlI GDGCHC 3 cut(s) 563, 660, 1332
MlsI TGGCCA 1 cut(s) 2080
MluNI TGGCCA 1 cut(s) 2080
MlyI GAGTC 4 cut(s) 350, 1615, 2082, 2511
MmeI TCCRAC 7 cut(s) 279, 742, 1262, 1615, 1763, 1933, 2479
Mox20I TGGCCA 1 cut(s) 2080
MroI TCCGGA 2 cut(s) 1216, 1277
MroXI GAANNNNTTC 2 cut(s) 75, 407
MscI TGGCCA 1 cut(s) 2080
MseI TTAA 2 cut(s) 1410, 1754
MslI CAYNNNNRTG 6 cut(s) 219, 392, 462, 1102, 2162, 2993
Msp20I TGGCCA 1 cut(s) 2080
MspA1I CMGCKG 4 cut(s) 270, 802, 1292, 1721
MspR9I CCNGG 4 cut(s) 1660, 1911, 2921, 3043
MunI CAATTG 1 cut(s) 1628
Mva1269I GAATGC 2 cut(s) 172, 2440
MvaI CCWGG 2 cut(s) 1911, 2921
MvnI CGCG 4 cut(s) 736, 2876, 2951, 3002
MwoI GCNNNNNNNGC 5 cut(s) 1327, 1878, 1892, 2609, 2882
NciI CCSGG 2 cut(s) 1660, 3043
NcoI CCATGG 1 cut(s) 2081
NlaIII CATG 9 cut(s) 262, 703, 1063, 1236, 1672, 1801, 2085, 2203, 2413
NlaIV GGNNCC 4 cut(s) 418, 639, 1783, 2170
NmeAIII GCCGAG 1 cut(s) 1062
NmuCI GTSAC 2 cut(s) 1301, 2767
NspI RCATGY 3 cut(s) 1672, 1801, 2413
NspV TTCGAA 1 cut(s) 1255
PaeR7I CTCGAG 1 cut(s) 858
PagI TCATGA 1 cut(s) 2199
PciI ACATGT 1 cut(s) 1668
PciSI GCTCTTC 1 cut(s) 2943
PcsI WCGNNNNNNNCGW 1 cut(s) 2376
PctI GAATGC 2 cut(s) 172, 2440
PdmI GAANNNNTTC 2 cut(s) 75, 407
PinAI ACCGGT 2 cut(s) 1072, 1349
PkrI GCNGC 3 cut(s) 801, 960, 1810
PleI GAGTC 4 cut(s) 349, 1614, 2082, 2510
PmaCI CACGTG 2 cut(s) 1924, 2902
PmlI CACGTG 2 cut(s) 1924, 2902
PpsI GAGTC 4 cut(s) 349, 1614, 2082, 2510
Ppu21I YACGTR 2 cut(s) 1924, 2902
PscI ACATGT 1 cut(s) 1668
Psp124BI GAGCTC 2 cut(s) 660, 1332
Psp6I CCWGG 2 cut(s) 1909, 2919
PspCI CACGTG 2 cut(s) 1924, 2902
PspGI CCWGG 2 cut(s) 1909, 2919
PspN4I GGNNCC 4 cut(s) 418, 639, 1783, 2170
PspPI GGNCC 1 cut(s) 1781
PstI CTGCAG 2 cut(s) 960, 2122
PstNI CAGNNNCTG 1 cut(s) 2107
PsuI RGATCY 6 cut(s) 96, 502, 1280, 2020, 2672, 2788
PvuII CAGCTG 2 cut(s) 802, 1292
RsaI GTAC 4 cut(s) 639, 746, 2408, 2699
RsaNI GTAC 4 cut(s) 638, 745, 2407, 2698
RseI CAYNNNNRTG 6 cut(s) 219, 392, 462, 1102, 2162, 2993
SacI GAGCTC 2 cut(s) 660, 1332
SapI GCTCTTC 1 cut(s) 2943
SaqAI TTAA 2 cut(s) 1410, 1754
SatI GCNGC 3 cut(s) 800, 959, 1809
Sau96I GGNCC 1 cut(s) 1781
SchI GAGTC 4 cut(s) 350, 1615, 2082, 2511
ScrFI CCNGG 4 cut(s) 1660, 1911, 2921, 3043
SduI GDGCHC 3 cut(s) 563, 660, 1332
SfaNI GCATC 7 cut(s) 211, 1087, 1330, 1653, 2625, 2889, 2904
SfcI CTRYAG 3 cut(s) 956, 2118, 2220
Sfr274I CTCGAG 1 cut(s) 858
SfuI TTCGAA 1 cut(s) 1255
SinI GGWCC 1 cut(s) 1781
SlaI CTCGAG 1 cut(s) 858
SmiMI CAYNNNNRTG 6 cut(s) 219, 392, 462, 1102, 2162, 2993
SmlI CTYRAG 8 cut(s) 469, 524, 587, 858, 1028, 1037, 1444, 1616
SmoI CTYRAG 8 cut(s) 469, 524, 587, 858, 1028, 1037, 1444, 1616
SsiI CCGC 5 cut(s) 270, 1721, 1851, 2949, 3002
SspMI CTAG 7 cut(s) 434, 1325, 1883, 2040, 2363, 2426, 2744
SstI GAGCTC 2 cut(s) 660, 1332
StyD4I CCNGG 4 cut(s) 1658, 1909, 2919, 3041
StyI CCWWGG 3 cut(s) 666, 2081, 2425
TaaI ACNGT 8 cut(s) 218, 820, 839, 2109, 2221, 2238, 2656, 2741
TaqII GACCGA 1 cut(s) 596
TatI WGTACW 1 cut(s) 2406
Tru1I TTAA 2 cut(s) 1410, 1754
Tru9I TTAA 2 cut(s) 1410, 1754
TscAI CASTG 8 cut(s) 221, 570, 1749, 2122, 2224, 2715, 2931, 3078
TseFI GTSAC 2 cut(s) 1301, 2767
TseI GCWGC 3 cut(s) 799, 958, 1808
Tsp45I GTSAC 2 cut(s) 1301, 2767
TspDTI ATGAA 8 cut(s) 182, 275, 688, 1056, 1456, 1936, 2307, 2630
TspGWI ACGGA 3 cut(s) 990, 1794, 2715
TspRI CASTG 8 cut(s) 221, 570, 1749, 2122, 2224, 2715, 2931, 3078
VpaK11BI GGWCC 1 cut(s) 1781
XapI RAATTY 6 cut(s) 967, 1090, 1356, 1497, 1917, 2456
XbaI TCTAGA 1 cut(s) 1324
XceI RCATGY 3 cut(s) 1672, 1801, 2413
XcmI CCANNNNNNNNNTGG 1 cut(s) 1562
XhoI CTCGAG 1 cut(s) 858
XmaJI CCTAGG 1 cut(s) 2425
XmiI GTMKAC 2 cut(s) 2335, 2400
XmnI GAANNNNTTC 2 cut(s) 75, 407
XspI CTAG 7 cut(s) 434, 1325, 1883, 2040, 2363, 2426, 2744
ZraI GACGTC 2 cut(s) 1114, 2986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.