Rorug02G0619500
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
73668802 .. 73669086
285 bp
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UTR
Exon/CDS
Intron
Rorug02G0619500.1

Sequence Viewer

Length: 285 bp
ATGTCTACGGTTGTTAAGATGCTGACAGGTGAGACAGACGTGGATGACGAGAAGATAGACAAACCTGGAATGCTTTCTGAGTTCATGGACTGGAGAGATTCGGCTGATGCTAAACACTCATCTTACTCGCTATCACCTTATGGGAGGGTTCTCAATTTGTCATCTTCCTCCGAAAAAATCACCACTTCATTTGCTACCATGACCTTTAATTCTATATTTCTATATATGACCGAAGAAATTATGACGGCAAAGAAACATCTTTCTGGTGTTGTTTGGTATGGGTAG

Protein Analysis

94

Amino Acids

10.57

Weight (kDa)

4.97

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013993)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 5
AjiI CACGTC 1 cut(s) 40
AjnI CCWGG 1 cut(s) 64
Alw26I GTCTC 1 cut(s) 26
Asp700I GAANNNNTTC 1 cut(s) 73
AsuHPI GGTGA 3 cut(s) 41, 126, 172
BceAI ACGGC 1 cut(s) 261
BciT130I CCWGG 1 cut(s) 66
BcoDI GTCTC 1 cut(s) 26
Bme1390I CCNGG 1 cut(s) 66
BmgBI CACGTC 1 cut(s) 40
BmrFI CCNGG 1 cut(s) 66
BmsI GCATC 2 cut(s) 9, 97
BpmI CTGGAG 1 cut(s) 112
Bse1I ACTGG 1 cut(s) 95
BseBI CCWGG 1 cut(s) 66
BseGI GGATG 1 cut(s) 49
BseMII CTCAG 1 cut(s) 69
BseNI ACTGG 1 cut(s) 95
BsmAI GTCTC 1 cut(s) 26
BsmI GAATGC 1 cut(s) 75
BspCNI CTCAG 1 cut(s) 70
BsrI ACTGG 1 cut(s) 95
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 1 cut(s) 10
BstDEI CTNAG 1 cut(s) 78
BstF5I GGATG 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 26
BstNI CCWGG 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 64
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 1 cut(s) 49
CspCI CAANNNNNGTGG 2 cut(s) 172, 207
CviAII CATG 2 cut(s) 85, 199
CviJI RGCY 1 cut(s) 104
CviKI_1 RGCY 1 cut(s) 104
DdeI CTNAG 1 cut(s) 78
EcoRII CCWGG 1 cut(s) 64
FaeI CATG 2 cut(s) 88, 202
FaiI YATR 9 cut(s) 86, 141, 200, 215, 223, 225, 227, 242, 279
FatI CATG 2 cut(s) 84, 198
FblI GTMKAC 1 cut(s) 5
FokI GGATG 1 cut(s) 56
GsuI CTGGAG 1 cut(s) 112
Hin1II CATG 2 cut(s) 88, 202
HinfI GANTC 1 cut(s) 98
HphI GGTGA 3 cut(s) 41, 126, 172
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 2 cut(s) 79, 172
Hpy8I GTNNAC 1 cut(s) 6
HpyCH4III ACNGT 1 cut(s) 10
HpyCH4IV ACGT 1 cut(s) 39
HpyF3I CTNAG 1 cut(s) 78
HpySE526I ACGT 1 cut(s) 39
Hsp92II CATG 2 cut(s) 88, 202
LpnPI CCDG 5 cut(s) 12, 51, 76, 78, 249
LweI GCATC 2 cut(s) 9, 97
MaeII ACGT 1 cut(s) 39
MboII GAAGA 3 cut(s) 64, 156, 245
MluCI AATT 3 cut(s) 154, 208, 237
MnlI CCTC 2 cut(s) 138, 178
MroXI GAANNNNTTC 1 cut(s) 73
MseI TTAA 2 cut(s) 15, 207
MspR9I CCNGG 1 cut(s) 66
Mva1269I GAATGC 1 cut(s) 75
MvaI CCWGG 1 cut(s) 66
NlaIII CATG 2 cut(s) 88, 202
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 73
PfeI GAWTC 1 cut(s) 98
Psp6I CCWGG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 64
SaqAI TTAA 2 cut(s) 15, 207
ScrFI CCNGG 1 cut(s) 66
SetI ASST 5 cut(s) 31, 42, 67, 139, 206
SfaNI GCATC 2 cut(s) 9, 97
Sse9I AATT 3 cut(s) 154, 208, 237
StyD4I CCNGG 1 cut(s) 64
TaaI ACNGT 1 cut(s) 10
TaiI ACGT 1 cut(s) 42
TaqII GACCGA 1 cut(s) 245
TasI AATT 3 cut(s) 154, 208, 237
TfiI GAWTC 1 cut(s) 98
Tru1I TTAA 2 cut(s) 15, 207
Tru9I TTAA 2 cut(s) 15, 207
TspDTI ATGAA 2 cut(s) 73, 177
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.