Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008347

Physical Location & Seq

Genomic Coordinates Reverse (-)

2733596 .. 2735819

Gene Structure 2224 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G08610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGCTTCGTCGAATTTGCTACTTGAGGTTCAGTTCTTGCATATTCCTAGTCTGTCTCAAAAGCAGGCGAATCCTTTATCTTGCAGAAAGTTTTCTTCTTTAGATTGGAAGCAAGAAATTGGGCTGAAAAAGGATGTTTTTTTTAGATGTCACGGCTTGTTAAGTAGTGTGTGCATTGACAATGTAAATGATCATGCTGAGAGAAGCTCAGAGTTCCATCACTATGGTGTCGGTACTAACTTGAGAGCCAGAGTGAAACCTATGAAGCAATTTGGTTTATCATCTGATGGACCAATTACAGAGAACGACGAAGAGACCAACAATGAGATCCTTCATAACCTGTGCAGCAATGGGAAGTTAACAGATGCGTGCAAACTTGTCGAGGTGATGGCACGACATAATCAGGTTCCTCATTTTCCTTCTTGCTCAAACTTAGTCCGTGGTCTAGCCAGAATTGATCAACTGGATAAAGCAATGTGTATCTTGAGAGTAATGGTAATGTCTGGTGGGGTTCCAGATACTATTACCTATAACATGATCATCGGAAATCTTTGCAAGAAAGGGCATATAAGAACTGCTTTGGTCCTCTTAGAAGATATGAGTTTGAGTGGGAGCCCTCCTGATGTGATCACGTATAACACAGTGATTCGGTGTATGTTTGATTATGGGAATGCTGAGCAAGCCATCAGGTTTTGGAAGGATCAACTGCAGAATGGTTGCCCTCCATTTATGATTACATACACGGTTTTGGTCGAACTCGTGTGCAGGTACTGTGGAAGCGCTCGAGCTATAGAAGTTTTAGAAGACATGGCAGTGGAAGGTTGCTATCCTGACATTGTCACATATAATTCTCTGGTTAACTATAACTGCAGGCGAGGGAATTTGGAAGAGGTGGCTTCGGTTATTCAGCATATCTTATCTCATGGATTGGAACTGAACACTGTAACTTACAACACTCTTCTACATTCCCTCTGTTCCCACGAGTACTGGGATGAAGTGGAGGAGATTCTAAACATCATGTACCAGACGTCCTACTGTCCAACTGTTATTACTTACAACATCCTGATTAATGGTTTATGCAAAGCCAGGCTTTTGAGTCGTGCAATTGATTTCTTCTACCAAATGCTGGAACAGAAGTGTTTGCCTGATATAGTCACTTACAACACAGTTCTCGGAGCCATGTCCAAAGAGGGCATGGTAGATGATGCGATTGAGTTGCTTGGATTGCTGAAAAACACATGTTGTCCGCCGGGCTTGATCACTTACAACTCTGTAATCGATGGATTGGCTAAAAAGGGCCTGATGAAGAAAGCATTGGAGCTGTACCATCAGATGCTGGATGCTGGAATCTTTCCGGATGATATAACTCGTCGGTCTTTAATATATGGTTTCTGCCGGGCAAACCTAGTTGAAGAAGCTGGCCAAGTTTTAAAGGAGACGAGCAATAGAGGGAATGGGATCAGAGGTAGCACTTACAGGTTGGTGATCCAAGGGCTGTGCAAGAAGAAAGAGATAGAAATGGCGATAGAGGTTGTTGAGATAATGCTAACAGGTGGGTGTAAGCCAGATGAGACAATATACACCGCAATAGTTAAAGGCGTGGAAGAGATGGGAATGGGAAGCGAGGCTGTTCAGTTGCAGAAGAAACTGAAGCAATGGAAACTCTTGAAAGAAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

559

Amino Acids

62.72

Weight (kDa)

6.0

Isoelectric Point (pI)

39.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	122 - 234	5.4e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	169 - 201	9.3e-09	PPR repeat
PPR_2	PF13041	172 - 219	7.6e-14	PPR repeat family
PPR_2	PF13041	207 - 256	1.6e-09	PPR repeat family
PPR_long	PF17177	237 - 355	6.5e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	245 - 290	6.2e-07	PPR repeat family
PPR_1	PF12854	274 - 297	9.6e-06	PPR repeat
PPR_2	PF13041	277 - 325	1.4e-11	PPR repeat family
PPR_3	PF13812	302 - 357	1.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	309 - 340	4e-06	PPR repeat
PPR_2	PF13041	313 - 361	3.6e-14	PPR repeat family
PPR_1	PF12854	345 - 375	1.5e-10	PPR repeat
PPR_2	PF13041	347 - 391	3.7e-13	PPR repeat family
PPR	PF01535	350 - 380	7e-07	PPR repeat
PPR_1	PF12854	380 - 407	4.9e-07	PPR repeat
PPR_2	PF13041	382 - 431	6.7e-12	PPR repeat family
PPR_1	PF12854	414 - 445	6.7e-08	PPR repeat
PPR_2	PF13041	417 - 466	5.7e-14	PPR repeat family
PPR	PF01535	420 - 450	1.1e-08	PPR repeat
PPR_2	PF13041	491 - 533	1.9e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0008347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08610
fragaria_vesca	FvH4_6g01910 FvH4_6g01910 FvH4_6g01910 FvH4_6g01910 FvH4_6g01910
malus_domestica	MD04G1230200.v1.1
prunus_persica	Prupe.6G350100_v2.0.a1 Prupe.6G350100_v2.0.a1 Prupe.6G350100_v2.0.a1 Prupe.6G350100_v2.0.a1
pyrus_communis	pycom04g20410
rosa_chinensis	RchiOBHm_Chr3g0449641
rosa_laevigata	RLG00000025812
rosa_multiflora	Rmu_sc0007357.1_g000003 Rmu_sc0009629.1_g000014
rosa_roxburghii	Rroxscaffold_6G00427540
rosa_rugosa	Rorug02G0622600
rosa_samantha	Rh3AG020500 Rh3BG021200 Rh3CG019700 Rh3DG021000
rosa_wichuraiana	Rw3G001690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1031
Acc36I	ACCTGC	1 cut(s)	756
AccB7I	CCANNNNNTGG	1 cut(s)	1126
AccIII	TCCGGA	1 cut(s)	1354
AciI	CCGC	2 cut(s)	1247, 1584
AclWI	GGATC	4 cut(s)	322, 708, 1466, 1480
AcoI	YGGCCR	1 cut(s)	1420
AcsI	RAATTY	2 cut(s)	13, 880
AcuI	CTGAAG	1 cut(s)	1670
AcyI	GRCGYC	1 cut(s)	1028
AfaI	GTAC	5 cut(s)	235, 770, 986, 1022, 1325
AfeI	AGCGCT	1 cut(s)	781
AfiI	CCNNNNNNNGG	1 cut(s)	1126
AflIII	ACRYGT	1 cut(s)	1238
AgsI	TTSAA	2 cut(s)	1412, 1669
AjnI	CCWGG	1 cut(s)	1085
AjuI	GAANNNNNNNTTGG	2 cut(s)	1298, 1330
AleI	CACNNNNGTG	1 cut(s)	225
AluBI	AGCT	4 cut(s)	207, 788, 1321, 1418
AluI	AGCT	4 cut(s)	207, 788, 1321, 1418
Alw26I	GTCTC	4 cut(s)	60, 308, 1430, 1565
AlwI	GGATC	4 cut(s)	322, 708, 1466, 1480
AlwNI	CAGNNNCTG	2 cut(s)	771, 1336
Ama87I	CYCGRG	1 cut(s)	783
Aor13HI	TCCGGA	1 cut(s)	1354
Aor51HI	AGCGCT	1 cut(s)	781
AoxI	GGCC	2 cut(s)	1297, 1420
ApeKI	GCWGC	1 cut(s)	345
ApoI	RAATTY	2 cut(s)	13, 880
AseI	ATTAAT	1 cut(s)	1068
Asp700I	GAANNNNTTC	1 cut(s)	91
AspLEI	GCGC	1 cut(s)	782
AspS9I	GGNCC	3 cut(s)	290, 583, 1297
AsuC2I	CCSGG	2 cut(s)	1251, 1397
AsuHPI	GGTGA	2 cut(s)	397, 1495
AvaI	CYCGRG	1 cut(s)	783
AvaII	GGWCC	2 cut(s)	290, 583
BalI	TGGCCA	1 cut(s)	1422
BanII	GRGCYC	1 cut(s)	617
BauI	CACGAG	2 cut(s)	758, 980
BbsI	GAAGAC	1 cut(s)	810
BbvI	GCAGC	1 cut(s)	357
BccI	CCATC	7 cut(s)	225, 281, 382, 692, 1274, 1335, 1603
BceAI	ACGGC	1 cut(s)	169
BcgI	CGANNNNNNTGC	4 cut(s)	361, 395, 1198, 1232
BciT130I	CCWGG	1 cut(s)	1087
BclI	TGATCA	5 cut(s)	190, 457, 537, 627, 1257
BcnI	CCSGG	2 cut(s)	1251, 1397
BcoDI	GTCTC	4 cut(s)	60, 308, 1430, 1565
BfaI	CTAG	3 cut(s)	48, 446, 1406
BfmI	CTRYAG	3 cut(s)	707, 789, 868
BfoI	RGCGCY	1 cut(s)	783
BfuAI	ACCTGC	1 cut(s)	756
BisI	GCNGC	1 cut(s)	346
BlpI	GCTNAGC	1 cut(s)	675
BlsI	GCNGC	1 cut(s)	347
BmcAI	AGTACT	1 cut(s)	986
Bme1390I	CCNGG	3 cut(s)	1087, 1251, 1397
Bme18I	GGWCC	2 cut(s)	290, 583
BmeT110I	CYCGRG	1 cut(s)	783
BmgT120I	GGNCC	3 cut(s)	290, 583, 1297
BmiI	GGNNCC	4 cut(s)	408, 513, 614, 1177
BmrFI	CCNGG	3 cut(s)	1087, 1251, 1397
BmrI	ACTGGG	1 cut(s)	997
BmsI	GCATC	4 cut(s)	355, 1195, 1323, 1330
BmuI	ACTGGG	1 cut(s)	997
BpiI	GAAGAC	1 cut(s)	810
BplI	GAGNNNNNCTC	2 cut(s)	191, 223
Bpu1102I	GCTNAGC	1 cut(s)	675
BpuEI	CTTGAG	3 cut(s)	44, 262, 505
BpuMI	CCSGG	2 cut(s)	1251, 1397
Bsa29I	ATCGAT	1 cut(s)	1278
BsaAI	YACGTR	1 cut(s)	633
BsaHI	GRCGYC	1 cut(s)	1028
BsaI	GGTCTC	1 cut(s)	308
BsaJI	CCNNGG	2 cut(s)	439, 1489
BsaWI	WCCGGW	1 cut(s)	1354
Bsc4I	CCNNNNNNNGG	1 cut(s)	1126
Bse1I	ACTGG	2 cut(s)	468, 992
Bse3DI	GCAATG	3 cut(s)	355, 480, 1661
BseAI	TCCGGA	1 cut(s)	1354
BseBI	CCWGG	1 cut(s)	1087
BseCI	ATCGAT	1 cut(s)	1278
BseDI	CCNNGG	2 cut(s)	439, 1489
BseGI	GGATG	5 cut(s)	139, 997, 1059, 1345, 1363
BseLI	CCNNNNNNNGG	1 cut(s)	1126
BseMI	GCAATG	3 cut(s)	355, 480, 1661
BseMII	CTCAG	3 cut(s)	189, 222, 666
BseNI	ACTGG	2 cut(s)	468, 992
BseRI	GAGGAG	1 cut(s)	1016
BseXI	GCAGC	1 cut(s)	357
BsgI	GTGCAG	2 cut(s)	364, 784
BshFI	GGCC	2 cut(s)	1299, 1422
BshVI	ATCGAT	1 cut(s)	1278
BsiHKCI	CYCGRG	1 cut(s)	783
BsiSI	CCGG	3 cut(s)	1250, 1355, 1396
BslI	CCNNNNNNNGG	1 cut(s)	1126
BsmAI	GTCTC	4 cut(s)	60, 308, 1430, 1565
BsmBI	CGTCTC	1 cut(s)	1430
BsmI	GAATGC	1 cut(s)	676
BsnI	GGCC	2 cut(s)	1299, 1422
Bso31I	GGTCTC	1 cut(s)	308
BsoBI	CYCGRG	1 cut(s)	783
Bsp1286I	GDGCHC	1 cut(s)	617
Bsp13I	TCCGGA	1 cut(s)	1354
Bsp143I	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
Bsp1720I	GCTNAGC	1 cut(s)	675
BspACI	CCGC	2 cut(s)	1247, 1584
BspANI	GGCC	2 cut(s)	1299, 1422
BspCNI	CTCAG	3 cut(s)	190, 221, 667
BspDI	ATCGAT	1 cut(s)	1278
BspEI	TCCGGA	1 cut(s)	1354
BspLI	GGNNCC	4 cut(s)	408, 513, 614, 1177
BspMAI	CTGCAG	2 cut(s)	711, 872
BspMI	ACCTGC	1 cut(s)	756
BspPI	GGATC	4 cut(s)	322, 708, 1466, 1480
BspTNI	GGTCTC	1 cut(s)	308
BsrDI	GCAATG	3 cut(s)	355, 480, 1661
BsrI	ACTGG	2 cut(s)	468, 992
BssECI	CCNNGG	2 cut(s)	439, 1489
BssMI	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
BssNI	GRCGYC	1 cut(s)	1028
BssSI	CACGAG	2 cut(s)	758, 980
BssT1I	CCWWGG	1 cut(s)	1489
Bst2BI	CACGAG	2 cut(s)	758, 980
Bst2UI	CCWGG	1 cut(s)	1087
Bst4CI	ACNGT	7 cut(s)	643, 745, 773, 943, 1037, 1045, 1168
Bst6I	CTCTTC	4 cut(s)	306, 882, 963, 1599
BstACI	GRCGYC	1 cut(s)	1028
BstBAI	YACGTR	1 cut(s)	633
BstC8I	GCNNGC	5 cut(s)	66, 370, 681, 872, 1420
BstDEI	CTNAG	5 cut(s)	198, 208, 433, 589, 675
BstDSI	CCRYGG	1 cut(s)	439
BstF5I	GGATG	5 cut(s)	139, 997, 1059, 1345, 1363
BstH2I	RGCGCY	1 cut(s)	783
BstHHI	GCGC	1 cut(s)	782
BstKTI	GATC	9 cut(s)	193, 330, 460, 540, 630, 703, 1260, 1461, 1488
BstMAI	GTCTC	4 cut(s)	60, 308, 1430, 1565
BstMBI	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
BstMWI	GCNNNNNNNGC	2 cut(s)	680, 1225
BstNI	CCWGG	1 cut(s)	1087
BstNSI	RCATGY	1 cut(s)	1242
BstSCI	CCNGG	3 cut(s)	1085, 1249, 1395
BstSFI	CTRYAG	3 cut(s)	707, 789, 868
BstV1I	GCAGC	1 cut(s)	357
BstV2I	GAAGAC	1 cut(s)	810
BstX2I	RGATCY	1 cut(s)	327
BstXI	CCANNNNNNTGG	1 cut(s)	224
BstYI	RGATCY	1 cut(s)	327
Bsu15I	ATCGAT	1 cut(s)	1278
BsuRI	GGCC	2 cut(s)	1299, 1422
BsuTUI	ATCGAT	1 cut(s)	1278
BtgI	CCRYGG	1 cut(s)	439
BtsCI	GGATG	5 cut(s)	139, 997, 1059, 1345, 1363
BtsI	GCAGTG	1 cut(s)	819
BtsIMutI	CAGTG	3 cut(s)	648, 819, 939
BveI	ACCTGC	1 cut(s)	756
Cac8I	GCNNGC	5 cut(s)	66, 370, 681, 872, 1420
CaiI	CAGNNNCTG	2 cut(s)	771, 1336
CfoI	GCGC	1 cut(s)	782
Cfr13I	GGNCC	3 cut(s)	290, 583, 1297
ClaI	ATCGAT	1 cut(s)	1278
Csp6I	GTAC	5 cut(s)	234, 769, 985, 1021, 1324
CviAII	CATG	8 cut(s)	194, 535, 808, 923, 1018, 1180, 1195, 1239
CviQI	GTAC	5 cut(s)	234, 769, 985, 1021, 1324
DdeI	CTNAG	5 cut(s)	198, 208, 433, 589, 675
DpnI	GATC	9 cut(s)	192, 329, 459, 539, 629, 702, 1259, 1460, 1487
DpnII	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
DraI	TTTAAA	1 cut(s)	1431
EaeI	YGGCCR	1 cut(s)	1420
Eam1104I	CTCTTC	4 cut(s)	306, 882, 963, 1599
EarI	CTCTTC	4 cut(s)	306, 882, 963, 1599
EciI	GGCGGA	1 cut(s)	1236
Eco130I	CCWWGG	1 cut(s)	1489
Eco24I	GRGCYC	1 cut(s)	617
Eco31I	GGTCTC	1 cut(s)	308
Eco47I	GGWCC	2 cut(s)	290, 583
Eco47III	AGCGCT	1 cut(s)	781
Eco57I	CTGAAG	1 cut(s)	1670
Eco88I	CYCGRG	1 cut(s)	783
EcoO109I	RGGNCCY	1 cut(s)	1297
EcoRII	CCWGG	1 cut(s)	1085
EcoT14I	CCWWGG	1 cut(s)	1489
EcoT38I	GRGCYC	1 cut(s)	617
ErhI	CCWWGG	1 cut(s)	1489
Esp3I	CGTCTC	1 cut(s)	1430
FaeI	CATG	8 cut(s)	197, 538, 811, 926, 1021, 1183, 1198, 1242
FalI	AAGNNNNNCTT	4 cut(s)	562, 594, 1074, 1106
FatI	CATG	8 cut(s)	193, 534, 807, 922, 1017, 1179, 1194, 1238
FbaI	TGATCA	5 cut(s)	190, 457, 537, 627, 1257
Fnu4HI	GCNGC	1 cut(s)	346
FokI	GGATG	5 cut(s)	146, 1004, 1046, 1352, 1370
FriOI	GRGCYC	1 cut(s)	617
Fsp4HI	GCNGC	1 cut(s)	346
FspBI	CTAG	3 cut(s)	48, 446, 1406
GlaI	GCGC	1 cut(s)	781
GluI	GCNGC	1 cut(s)	346
HaeII	RGCGCY	1 cut(s)	783
HaeIII	GGCC	2 cut(s)	1299, 1422
HapII	CCGG	3 cut(s)	1250, 1355, 1396
HhaI	GCGC	1 cut(s)	782
Hin1I	GRCGYC	1 cut(s)	1028
Hin1II	CATG	8 cut(s)	197, 538, 811, 926, 1021, 1183, 1198, 1242
Hin6I	GCGC	1 cut(s)	780
HinP1I	GCGC	1 cut(s)	780
HincII	GTYRAC	2 cut(s)	360, 859
HindII	GTYRAC	2 cut(s)	360, 859
HinfI	GANTC	5 cut(s)	70, 646, 1006, 1096, 1347
HpaI	GTTAAC	2 cut(s)	360, 859
HpaII	CCGG	3 cut(s)	1250, 1355, 1396
HphI	GGTGA	2 cut(s)	397, 1495
Hpy166II	GTNNAC	2 cut(s)	360, 859
Hpy188I	TCNGA	6 cut(s)	211, 286, 545, 1175, 1332, 1463
Hpy188III	TCNNGA	7 cut(s)	484, 515, 620, 830, 1063, 1355, 1666
Hpy8I	GTNNAC	2 cut(s)	360, 859
Hpy99I	CGWCG	3 cut(s)	13, 311, 1374
HpyAV	CCTTC	4 cut(s)	341, 429, 691, 812
HpyCH4III	ACNGT	7 cut(s)	643, 745, 773, 943, 1037, 1045, 1168
HpyCH4IV	ACGT	2 cut(s)	632, 1028
HpyF10VI	GCNNNNNNNGC	2 cut(s)	680, 1225
HpyF3I	CTNAG	5 cut(s)	198, 208, 433, 589, 675
HpySE526I	ACGT	2 cut(s)	632, 1028
Hsp92I	GRCGYC	1 cut(s)	1028
Hsp92II	CATG	8 cut(s)	197, 538, 811, 926, 1021, 1183, 1198, 1242
HspAI	GCGC	1 cut(s)	780
Kpn2I	TCCGGA	1 cut(s)	1354
Ksp22I	TGATCA	5 cut(s)	190, 457, 537, 627, 1257
KspAI	GTTAAC	2 cut(s)	360, 859
Kzo9I	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
LmnI	GCTCC	3 cut(s)	612, 1175, 1318
Lsp1109I	GCAGC	1 cut(s)	357
LweI	GCATC	4 cut(s)	355, 1195, 1323, 1330
MaeI	CTAG	3 cut(s)	48, 446, 1406
MaeII	ACGT	2 cut(s)	632, 1028
MaeIII	GTNAC	4 cut(s)	149, 838, 943, 1153
MalI	GATC	9 cut(s)	192, 329, 459, 539, 629, 702, 1259, 1460, 1487
MboI	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
MfeI	CAATTG	1 cut(s)	1104
MflI	RGATCY	1 cut(s)	327
MhlI	GDGCHC	1 cut(s)	617
MlsI	TGGCCA	1 cut(s)	1422
MluCI	AATT	8 cut(s)	13, 117, 269, 294, 453, 847, 880, 1104
MluNI	TGGCCA	1 cut(s)	1422
MlyI	GAGTC	1 cut(s)	1105
MmeI	TCCRAC	1 cut(s)	1064
Mox20I	TGGCCA	1 cut(s)	1422
MroI	TCCGGA	1 cut(s)	1354
MroXI	GAANNNNTTC	1 cut(s)	91
MscI	TGGCCA	1 cut(s)	1422
MseI	TTAA	7 cut(s)	161, 359, 858, 1068, 1379, 1430, 1593
MslI	CAYNNNNRTG	3 cut(s)	222, 225, 812
Msp20I	TGGCCA	1 cut(s)	1422
MspI	CCGG	3 cut(s)	1250, 1355, 1396
MspR9I	CCNGG	3 cut(s)	1087, 1251, 1397
MunI	CAATTG	1 cut(s)	1104
Mva1269I	GAATGC	1 cut(s)	676
MvaI	CCWGG	1 cut(s)	1087
MwoI	GCNNNNNNNGC	2 cut(s)	680, 1225
NciI	CCSGG	2 cut(s)	1251, 1397
NdeII	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
NlaIII	CATG	8 cut(s)	197, 538, 811, 926, 1021, 1183, 1198, 1242
NlaIV	GGNNCC	4 cut(s)	408, 513, 614, 1177
NmuCI	GTSAC	3 cut(s)	149, 838, 1153
NspI	RCATGY	1 cut(s)	1242
OliI	CACNNNNGTG	1 cut(s)	225
PaeR7I	CTCGAG	1 cut(s)	783
PciI	ACATGT	1 cut(s)	1238
PctI	GAATGC	1 cut(s)	676
PdmI	GAANNNNTTC	1 cut(s)	91
PfeI	GAWTC	4 cut(s)	70, 646, 1006, 1347
PflFI	GACNNNGTC	1 cut(s)	836
PflMI	CCANNNNNTGG	1 cut(s)	1126
PkrI	GCNGC	1 cut(s)	347
PleI	GAGTC	1 cut(s)	1104
PpsI	GAGTC	1 cut(s)	1104
Ppu21I	YACGTR	1 cut(s)	633
PscI	ACATGT	1 cut(s)	1238
PshBI	ATTAAT	1 cut(s)	1068
Psp6I	CCWGG	1 cut(s)	1085
PspGI	CCWGG	1 cut(s)	1085
PspN4I	GGNNCC	4 cut(s)	408, 513, 614, 1177
PspPI	GGNCC	3 cut(s)	290, 583, 1297
PspXI	VCTCGAGB	1 cut(s)	783
PstI	CTGCAG	2 cut(s)	711, 872
PstNI	CAGNNNCTG	2 cut(s)	771, 1336
PsuI	RGATCY	1 cut(s)	327
PsyI	GACNNNGTC	1 cut(s)	836
RsaI	GTAC	5 cut(s)	235, 770, 986, 1022, 1325
RsaNI	GTAC	5 cut(s)	234, 769, 985, 1021, 1324
RseI	CAYNNNNRTG	3 cut(s)	222, 225, 812
SaqAI	TTAA	7 cut(s)	161, 359, 858, 1068, 1379, 1430, 1593
SatI	GCNGC	1 cut(s)	346
Sau3AI	GATC	9 cut(s)	190, 327, 457, 537, 627, 700, 1257, 1458, 1485
Sau96I	GGNCC	3 cut(s)	290, 583, 1297
ScaI	AGTACT	1 cut(s)	986
SchI	GAGTC	1 cut(s)	1105
ScrFI	CCNGG	3 cut(s)	1087, 1251, 1397
SduI	GDGCHC	1 cut(s)	617
SfaNI	GCATC	4 cut(s)	355, 1195, 1323, 1330
SfcI	CTRYAG	3 cut(s)	707, 789, 868
Sfr274I	CTCGAG	1 cut(s)	783
SinI	GGWCC	2 cut(s)	290, 583
SlaI	CTCGAG	1 cut(s)	783
SmiMI	CAYNNNNRTG	3 cut(s)	222, 225, 812
SmlI	CTYRAG	4 cut(s)	23, 241, 484, 783
SmoI	CTYRAG	4 cut(s)	23, 241, 484, 783
Sse9I	AATT	8 cut(s)	13, 117, 269, 294, 453, 847, 880, 1104
SsiI	CCGC	2 cut(s)	1247, 1584
SspMI	CTAG	3 cut(s)	48, 446, 1406
StyD4I	CCNGG	3 cut(s)	1085, 1249, 1395
StyI	CCWWGG	1 cut(s)	1489
TaaI	ACNGT	7 cut(s)	643, 745, 773, 943, 1037, 1045, 1168
TaiI	ACGT	2 cut(s)	635, 1031
TaqI	TCGA	5 cut(s)	11, 381, 753, 784, 1278
TaqII	GACCGA	1 cut(s)	1362
TasI	AATT	8 cut(s)	13, 117, 269, 294, 453, 847, 880, 1104
TatI	WGTACW	1 cut(s)	984
TfiI	GAWTC	4 cut(s)	70, 646, 1006, 1347
Tru1I	TTAA	7 cut(s)	161, 359, 858, 1068, 1379, 1430, 1593
Tru9I	TTAA	7 cut(s)	161, 359, 858, 1068, 1379, 1430, 1593
TscAI	CASTG	3 cut(s)	648, 819, 946
TseFI	GTSAC	3 cut(s)	149, 838, 1153
TseI	GCWGC	1 cut(s)	345
Tsp45I	GTSAC	3 cut(s)	149, 838, 1153
TspDTI	ATGAA	4 cut(s)	278, 323, 1008, 1319
TspGWI	ACGGA	1 cut(s)	428
TspRI	CASTG	3 cut(s)	648, 819, 946
Tth111I	GACNNNGTC	1 cut(s)	836
Van91I	CCANNNNNTGG	1 cut(s)	1126
VpaK11BI	GGWCC	2 cut(s)	290, 583
VspI	ATTAAT	1 cut(s)	1068
XapI	RAATTY	2 cut(s)	13, 880
XceI	RCATGY	1 cut(s)	1242
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1192
XhoI	CTCGAG	1 cut(s)	783
XmnI	GAANNNNTTC	1 cut(s)	91
XspI	CTAG	3 cut(s)	48, 446, 1406
ZraI	GACGTC	1 cut(s)	1029
ZrmI	AGTACT	1 cut(s)	986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.