Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0008347

Physical Location & Seq

Genomic Coordinates Forward (+)

21929824 .. 21931581

Gene Structure 1758 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g20410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGCGTGTACGATTACCCAACAGAGTAGTGCAGTTGATGTTGGTTGTTTGTATGGGTGTGCAAAGCAAGTTAGCCCCGGTTGTGGCATTGGCCATCTCTCAATATCAACAGTTTTAAGGAAGTATAATCGTGAAGCTCATTATTCTTTACAATGGAGAGGAGATGTTAGTTCCAAAAGAAATGCGGGTGTTTCACAGCGTAGGAGTTTTCAGCGAAGTGTTTGTATTGATAGAGTCCATGAAGTTCCCCTAGATGAATGGAGCTTTGATAGTGATGAGATGGGCATTGAGAAAAAATCTGGAGAGGAAACGAATAACAAGAAATCTCATAATGCTTTTGTATCGAATGTCGAAGGGCGCTTTGTGGGAAATGCTGAGGAGACCAATAATGATATTCTTAGGAACCTTTGCACCCGTGGGAAGTTAATTCATGCATCGAGGTTGGTTGAGGTCATGGCACGTCAAAACCAAGTTCCGTACTTCCCTTCTTGCACAAACTTAATACGGGGCCTTATCAAAATAGATCGATTAGATAAAGCTGAAAAAGTTCTAAAGATCATGATCATGTCTGGTGGGGTTCCAGATATTATCACATATAACATGATGGTTGGAGGTCTATGTAAGAGTGGACAGTTAAGCTCTGCAGTCGATCTCCTGGAAGATATGAGCGTGAGTGGTTGCCCTCCAGATGTGATTACTTACAATACTATAATTCGTTGCATGTTTACATTTGGGAATTATGACCAGGCGATTGCGTTTTGGAAGGACCAACTGAGAAAGGGATGCCCTCCTTATATAGTCACCTACACAATTCTCATTGAGCTAGTCTGCAGACACTGTGGAACGATGCGGGCTGTGGAAGTTTTGGGTGATATGGTGGCAGAGGGATGTTATCCTGATATTGTTACCTTCAATTCTCTGATTAACTTCACTTCCAGACAGAATAAGCTTGAAGATACTGCTTTGGTTATACATAGTCTTCTATCTCTCGGGTTGAAGCCCAACGCCATTACTTACAACACGATTCTCCATTCTCTTTGCAGCCGTGGGTGTTGGGAGGAAGCCGATGAAATCCTCACAATCATGAATGAAACTTCAGAACCCCCTACAGTTGTTACTTACAATATTTTGATCAATGGTTTATGTAAATTTGGGCTTGTAGATCGTGCCGTCAACTTCTTTACTCAAATGGTTTCTAAGAATTGTTATCCCGACATCATTACATATAACACACTCCTGGGCGCTCTTTGTAGGGCGGGAATGATTGATCAGGCCCTCGAATTACTTAATCTTTTAAGTGGCACCAGTCGATCACCTGGTTTGATCACTTACAATACTGTGATTGACGGATTGGCTAAGACAGGTTGTATGGAGAAAGCAATGGGATTGTATGGCCAAATGGTAGAAAATGGAATCATTCCTGATGAAATTACTCATCGTTCTTTGGTAGGTGGGTTTTGCCGGGCGAATCTGGTTGAGGAAGCTGTTCTGATACTGAAGGAGATGCATAAGAGAGGCCATCCGGTCCGTAATATGTCTTACAAATTTGTGATCCATGGATTATGTAGAAAGAAGAGAGTTGATATTGCAATACAAGTCCTAGAAATAATGATATCAAATCGAAGCATGCCAGACGAGGCAATTTATTCAACTATAATTGAAGGTGTAGCCGCTGCTGGTATGACAAAAGAGGCCGATGAGTTGCATCAAAAGCTGATCGAGTGGAAGGTTTTAAGTGAAGAGATCATGGTAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

586

Amino Acids

65.05

Weight (kDa)

6.38

Isoelectric Point (pI)

41.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	163 - 208	5.3e-09	PPR repeat family
PPR_1	PF12854	191 - 223	3.8e-10	PPR repeat
PPR_2	PF13041	194 - 241	4.2e-16	PPR repeat family
PPR	PF01535	197 - 227	1.2e-06	PPR repeat
PPR_3	PF13812	218 - 275	5.1e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	226 - 254	1.5e-06	PPR repeat
PPR_2	PF13041	229 - 278	8.2e-12	PPR repeat family
PPR_3	PF13812	259 - 310	3.6e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	265 - 309	2.2e-09	PPR repeat family
PPR_3	PF13812	325 - 379	9.6e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	331 - 360	8.1e-07	PPR repeat
PPR_2	PF13041	334 - 383	4.9e-15	PPR repeat family
PPR_1	PF12854	369 - 398	5.4e-13	PPR repeat
PPR_2	PF13041	369 - 418	2.8e-18	PPR repeat family
PPR	PF01535	372 - 402	4.5e-08	PPR repeat
PPR_1	PF12854	400 - 430	8.6e-11	PPR repeat
PPR_2	PF13041	404 - 430	2.3e-06	PPR repeat family
TPR_24	PF23276	418 - 518	4.8e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	439 - 488	4.4e-14	PPR repeat family
PPR	PF01535	442 - 472	8.3e-09	PPR repeat
PPR_1	PF12854	470 - 502	3.8e-08	PPR repeat
PPR_2	PF13041	513 - 557	1e-05	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08610
fragaria_vesca	FvH4_6g01910 FvH4_6g01910 FvH4_6g01910 FvH4_6g01910 FvH4_6g01910
malus_domestica	MD04G1230200.v1.1
prunus_persica	Prupe.6G350100_v2.0.a1 Prupe.6G350100_v2.0.a1 Prupe.6G350100_v2.0.a1 Prupe.6G350100_v2.0.a1
pyrus_communis	pycom04g20410
rosa_chinensis	RchiOBHm_Chr3g0449641
rosa_laevigata	RLG00000025812
rosa_multiflora	Rmu_sc0007357.1_g000003 Rmu_sc0009629.1_g000014
rosa_roxburghii	Rroxscaffold_6G00427540
rosa_rugosa	Rorug02G0622600
rosa_samantha	Rh3AG020500 Rh3BG021200 Rh3CG019700 Rh3DG021000
rosa_wichuraiana	Rw3G001690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1301
AciI	CCGC	4 cut(s)	185, 850, 1256, 1671
AclWI	GGATC	1 cut(s)	1546
AcoI	YGGCCR	2 cut(s)	91, 1393
AcsI	RAATTY	2 cut(s)	1148, 1544
AcuI	CTGAAG	2 cut(s)	1080, 1517
AfaI	GTAC	2 cut(s)	10, 479
AfiI	CCNNNNNNNGG	1 cut(s)	83
AgsI	TTSAA	5 cut(s)	913, 953, 997, 1650, 1661
AjiI	CACGTC	1 cut(s)	461
AjnI	CCWGG	4 cut(s)	654, 744, 1236, 1315
AluBI	AGCT	8 cut(s)	137, 264, 539, 639, 823, 949, 1484, 1714
AluI	AGCT	8 cut(s)	137, 264, 539, 639, 823, 949, 1484, 1714
Alw26I	GTCTC	1 cut(s)	374
AlwI	GGATC	1 cut(s)	1546
AlwNI	CAGNNNCTG	1 cut(s)	837
Ama87I	CYCGRG	1 cut(s)	989
AoxI	GGCC	6 cut(s)	91, 508, 1272, 1393, 1516, 1692
ApeKI	GCWGC	2 cut(s)	1041, 1673
ApoI	RAATTY	2 cut(s)	1148, 1544
Asp700I	GAANNNNTTC	2 cut(s)	546, 1485
AspLEI	GCGC	2 cut(s)	360, 1244
AspS9I	GGNCC	4 cut(s)	508, 766, 1273, 1525
AsuC2I	CCSGG	2 cut(s)	78, 1463
AsuHPI	GGTGA	3 cut(s)	793, 881, 1305
AvaI	CYCGRG	1 cut(s)	989
AvaII	GGWCC	2 cut(s)	766, 1525
BalI	TGGCCA	2 cut(s)	93, 1395
BanI	GGYRCC	1 cut(s)	1301
BbsI	GAAGAC	1 cut(s)	971
BbvCI	CCTCAGC	1 cut(s)	375
BbvI	GCAGC	2 cut(s)	1053, 1660
BccI	CCATC	4 cut(s)	102, 274, 598, 1527
BceAI	ACGGC	2 cut(s)	1029, 1154
BciT130I	CCWGG	4 cut(s)	656, 746, 1238, 1317
BclI	TGATCA	4 cut(s)	561, 1131, 1267, 1323
BcnI	CCSGG	2 cut(s)	78, 1463
BcoDI	GTCTC	1 cut(s)	374
BfaI	CTAG	4 cut(s)	251, 824, 1601, 1756
BfmI	CTRYAG	3 cut(s)	642, 829, 1107
BfoI	RGCGCY	2 cut(s)	361, 1245
BisI	GCNGC	3 cut(s)	1042, 1671, 1674
BlsI	GCNGC	3 cut(s)	1043, 1672, 1675
Bme1390I	CCNGG	6 cut(s)	78, 656, 746, 1238, 1317, 1463
Bme18I	GGWCC	2 cut(s)	766, 1525
BmeT110I	CYCGRG	1 cut(s)	989
BmgBI	CACGTC	1 cut(s)	461
BmgT120I	GGNCC	4 cut(s)	508, 766, 1273, 1525
BmiI	GGNNCC	4 cut(s)	404, 509, 579, 1303
BmrFI	CCNGG	6 cut(s)	78, 656, 746, 1238, 1317, 1463
BmsI	GCATC	5 cut(s)	443, 773, 837, 1494, 1714
BpiI	GAAGAC	1 cut(s)	971
BpmI	CTGGAG	2 cut(s)	321, 669
Bpu10I	CCTNAGC	1 cut(s)	375
BpuMI	CCSGG	2 cut(s)	78, 1463
Bsa29I	ATCGAT	1 cut(s)	526
BsaBI	GATNNNNATC	1 cut(s)	560
BsaI	GGTCTC	1 cut(s)	374
BsaJI	CCNNGG	5 cut(s)	76, 415, 1045, 1237, 1555
BsaWI	WCCGGW	1 cut(s)	1522
Bsc4I	CCNNNNNNNGG	1 cut(s)	83
Bse1I	ACTGG	1 cut(s)	1305
Bse3DI	GCAATG	1 cut(s)	1386
Bse8I	GATNNNNATC	1 cut(s)	560
BseBI	CCWGG	4 cut(s)	656, 746, 1238, 1317
BseCI	ATCGAT	1 cut(s)	526
BseDI	CCNNGG	5 cut(s)	76, 415, 1045, 1237, 1555
BseGI	GGATG	3 cut(s)	788, 893, 1519
BseJI	GATNNNNATC	1 cut(s)	560
BseLI	CCNNNNNNNGG	1 cut(s)	83
BseMI	GCAATG	1 cut(s)	1386
BseMII	CTCAG	2 cut(s)	366, 764
BseNI	ACTGG	1 cut(s)	1305
BseRI	GAGGAG	2 cut(s)	174, 392
BseXI	GCAGC	2 cut(s)	1053, 1660
BsgI	GTGCAG	1 cut(s)	51
BshFI	GGCC	6 cut(s)	93, 510, 1274, 1395, 1518, 1694
BshNI	GGYRCC	1 cut(s)	1301
BshVI	ATCGAT	1 cut(s)	526
BsiHKCI	CYCGRG	1 cut(s)	989
BsiSI	CCGG	3 cut(s)	78, 1462, 1523
BslI	CCNNNNNNNGG	1 cut(s)	83
BsmAI	GTCTC	1 cut(s)	374
BsnI	GGCC	6 cut(s)	93, 510, 1274, 1395, 1518, 1694
Bso31I	GGTCTC	1 cut(s)	374
BsoBI	CYCGRG	1 cut(s)	989
Bsp19I	CCATGG	1 cut(s)	1555
BspACI	CCGC	4 cut(s)	185, 850, 1256, 1671
BspANI	GGCC	6 cut(s)	93, 510, 1274, 1395, 1518, 1694
BspCNI	CTCAG	2 cut(s)	367, 765
BspDI	ATCGAT	1 cut(s)	526
BspHI	TCATGA	2 cut(s)	558, 1083
BspLI	GGNNCC	4 cut(s)	404, 509, 579, 1303
BspMAI	CTGCAG	2 cut(s)	646, 833
BspPI	GGATC	1 cut(s)	1546
BspT107I	GGYRCC	1 cut(s)	1301
BspTNI	GGTCTC	1 cut(s)	374
BsrDI	GCAATG	1 cut(s)	1386
BsrI	ACTGG	1 cut(s)	1305
BssECI	CCNNGG	5 cut(s)	76, 415, 1045, 1237, 1555
BssT1I	CCWWGG	1 cut(s)	1555
Bst2UI	CCWGG	4 cut(s)	656, 746, 1238, 1317
Bst4CI	ACNGT	5 cut(s)	112, 633, 839, 1111, 1339
Bst6I	CTCTTC	2 cut(s)	1568, 1734
BstC8I	GCNNGC	2 cut(s)	852, 1628
BstDEI	CTNAG	5 cut(s)	375, 398, 773, 1197, 1356
BstDSI	CCRYGG	3 cut(s)	415, 1045, 1555
BstF5I	GGATG	3 cut(s)	788, 893, 1519
BstH2I	RGCGCY	2 cut(s)	361, 1245
BstHHI	GCGC	2 cut(s)	360, 1244
BstMAI	GTCTC	1 cut(s)	374
BstMWI	GCNNNNNNNGC	1 cut(s)	1711
BstNI	CCWGG	4 cut(s)	656, 746, 1238, 1317
BstNSI	RCATGY	2 cut(s)	724, 1630
BstSCI	CCNGG	6 cut(s)	76, 654, 744, 1236, 1315, 1461
BstSFI	CTRYAG	3 cut(s)	642, 829, 1107
BstV1I	GCAGC	2 cut(s)	1053, 1660
BstV2I	GAAGAC	1 cut(s)	971
Bsu15I	ATCGAT	1 cut(s)	526
BsuRI	GGCC	6 cut(s)	93, 510, 1274, 1395, 1518, 1694
BsuTUI	ATCGAT	1 cut(s)	526
BtgI	CCRYGG	3 cut(s)	415, 1045, 1555
BtrI	CACGTC	1 cut(s)	461
BtsCI	GGATG	3 cut(s)	788, 893, 1519
BtsIMutI	CAGTG	1 cut(s)	835
Cac8I	GCNNGC	2 cut(s)	852, 1628
CaiI	CAGNNNCTG	1 cut(s)	837
CciI	TCATGA	2 cut(s)	558, 1083
CfoI	GCGC	2 cut(s)	360, 1244
Cfr13I	GGNCC	4 cut(s)	508, 766, 1273, 1525
ClaI	ATCGAT	1 cut(s)	526
CpoI	CGGWCCG	1 cut(s)	1525
CsiI	ACCWGGT	1 cut(s)	1315
Csp6I	GTAC	2 cut(s)	9, 478
CspI	CGGWCCG	1 cut(s)	1525
CviQI	GTAC	2 cut(s)	9, 478
DdeI	CTNAG	5 cut(s)	375, 398, 773, 1197, 1356
EaeI	YGGCCR	2 cut(s)	91, 1393
Eam1104I	CTCTTC	2 cut(s)	1568, 1734
EarI	CTCTTC	2 cut(s)	1568, 1734
Eco130I	CCWWGG	1 cut(s)	1555
Eco31I	GGTCTC	1 cut(s)	374
Eco32I	GATATC	1 cut(s)	1614
Eco47I	GGWCC	2 cut(s)	766, 1525
Eco57I	CTGAAG	2 cut(s)	1080, 1517
Eco88I	CYCGRG	1 cut(s)	989
EcoO109I	RGGNCCY	2 cut(s)	508, 1273
EcoRII	CCWGG	4 cut(s)	654, 744, 1236, 1315
EcoRV	GATATC	1 cut(s)	1614
EcoT14I	CCWWGG	1 cut(s)	1555
EcoT22I	ATGCAT	2 cut(s)	436, 1509
ErhI	CCWWGG	1 cut(s)	1555
FauI	CCCGC	3 cut(s)	178, 843, 1249
FbaI	TGATCA	4 cut(s)	561, 1131, 1267, 1323
Fnu4HI	GCNGC	3 cut(s)	1042, 1671, 1674
FokI	GGATG	3 cut(s)	795, 900, 1506
Fsp4HI	GCNGC	3 cut(s)	1042, 1671, 1674
FspBI	CTAG	4 cut(s)	251, 824, 1601, 1756
GlaI	GCGC	2 cut(s)	359, 1243
GluI	GCNGC	3 cut(s)	1042, 1671, 1674
GsuI	CTGGAG	2 cut(s)	321, 669
HaeII	RGCGCY	2 cut(s)	361, 1245
HaeIII	GGCC	6 cut(s)	93, 510, 1274, 1395, 1518, 1694
HapII	CCGG	3 cut(s)	78, 1462, 1523
HhaI	GCGC	2 cut(s)	360, 1244
Hin6I	GCGC	2 cut(s)	358, 1242
HinP1I	GCGC	2 cut(s)	358, 1242
HincII	GTYRAC	1 cut(s)	1174
HindII	GTYRAC	1 cut(s)	1174
HindIII	AAGCTT	1 cut(s)	947
HinfI	GANTC	4 cut(s)	234, 1024, 1413, 1468
HpaII	CCGG	3 cut(s)	78, 1462, 1523
HphI	GGTGA	3 cut(s)	793, 881, 1305
Hpy166II	GTNNAC	5 cut(s)	9, 629, 726, 1174, 1753
Hpy188I	TCNGA	3 cut(s)	921, 1099, 1491
Hpy8I	GTNNAC	5 cut(s)	9, 629, 726, 1174, 1753
HpyAV	CCTTC	7 cut(s)	347, 495, 757, 919, 1492, 1655, 1720
HpyCH4III	ACNGT	5 cut(s)	112, 633, 839, 1111, 1339
HpyCH4IV	ACGT	1 cut(s)	460
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1711
HpyF3I	CTNAG	5 cut(s)	375, 398, 773, 1197, 1356
HpySE526I	ACGT	1 cut(s)	460
HspAI	GCGC	2 cut(s)	358, 1242
Ksp22I	TGATCA	4 cut(s)	561, 1131, 1267, 1323
LmnI	GCTCC	1 cut(s)	261
Lsp1109I	GCAGC	2 cut(s)	1053, 1660
LweI	GCATC	5 cut(s)	443, 773, 837, 1494, 1714
MabI	ACCWGGT	1 cut(s)	1315
MaeI	CTAG	4 cut(s)	251, 824, 1601, 1756
MaeII	ACGT	1 cut(s)	460
MaeIII	GTNAC	3 cut(s)	799, 904, 1114
MboII	GAAGA	5 cut(s)	671, 965, 971, 1585, 1751
MlsI	TGGCCA	2 cut(s)	93, 1395
MluNI	TGGCCA	2 cut(s)	93, 1395
MlyI	GAGTC	1 cut(s)	243
MmeI	TCCRAC	1 cut(s)	589
Mox20I	TGGCCA	2 cut(s)	93, 1395
Mph1103I	ATGCAT	2 cut(s)	436, 1509
MroXI	GAANNNNTTC	2 cut(s)	546, 1485
MscI	TGGCCA	2 cut(s)	93, 1395
MseI	TTAA	8 cut(s)	116, 425, 500, 635, 924, 1287, 1295, 1733
MslI	CAYNNNNRTG	2 cut(s)	563, 1082
Msp20I	TGGCCA	2 cut(s)	93, 1395
MspA1I	CMGCKG	1 cut(s)	1673
MspI	CCGG	3 cut(s)	78, 1462, 1523
MspR9I	CCNGG	6 cut(s)	78, 656, 746, 1238, 1317, 1463
MvaI	CCWGG	4 cut(s)	656, 746, 1238, 1317
MwoI	GCNNNNNNNGC	1 cut(s)	1711
NciI	CCSGG	2 cut(s)	78, 1463
NcoI	CCATGG	1 cut(s)	1555
NlaIV	GGNNCC	4 cut(s)	404, 509, 579, 1303
NmuCI	GTSAC	1 cut(s)	799
NsiI	ATGCAT	2 cut(s)	436, 1509
NspI	RCATGY	2 cut(s)	724, 1630
PaeI	GCATGC	1 cut(s)	1630
PagI	TCATGA	2 cut(s)	558, 1083
PdmI	GAANNNNTTC	2 cut(s)	546, 1485
PfeI	GAWTC	3 cut(s)	1024, 1413, 1468
PfoI	TCCNGGA	1 cut(s)	654
PkrI	GCNGC	3 cut(s)	1043, 1672, 1675
PleI	GAGTC	1 cut(s)	242
PpsI	GAGTC	1 cut(s)	242
Psp6I	CCWGG	4 cut(s)	654, 744, 1236, 1315
PspGI	CCWGG	4 cut(s)	654, 744, 1236, 1315
PspN4I	GGNNCC	4 cut(s)	404, 509, 579, 1303
PspPI	GGNCC	4 cut(s)	508, 766, 1273, 1525
PstI	CTGCAG	2 cut(s)	646, 833
PstNI	CAGNNNCTG	1 cut(s)	837
RsaI	GTAC	2 cut(s)	10, 479
RsaNI	GTAC	2 cut(s)	9, 478
RseI	CAYNNNNRTG	2 cut(s)	563, 1082
Rsr2I	CGGWCCG	1 cut(s)	1525
RsrII	CGGWCCG	1 cut(s)	1525
SaqAI	TTAA	8 cut(s)	116, 425, 500, 635, 924, 1287, 1295, 1733
SatI	GCNGC	3 cut(s)	1042, 1671, 1674
Sau96I	GGNCC	4 cut(s)	508, 766, 1273, 1525
SchI	GAGTC	1 cut(s)	243
ScrFI	CCNGG	6 cut(s)	78, 656, 746, 1238, 1317, 1463
SexAI	ACCWGGT	1 cut(s)	1315
SfaNI	GCATC	5 cut(s)	443, 773, 837, 1494, 1714
SfcI	CTRYAG	3 cut(s)	642, 829, 1107
SinI	GGWCC	2 cut(s)	766, 1525
SmiMI	CAYNNNNRTG	2 cut(s)	563, 1082
SphI	GCATGC	1 cut(s)	1630
SsiI	CCGC	4 cut(s)	185, 850, 1256, 1671
SspI	AATATT	1 cut(s)	1126
SspMI	CTAG	4 cut(s)	251, 824, 1601, 1756
StyD4I	CCNGG	6 cut(s)	76, 654, 744, 1236, 1315, 1461
StyI	CCWWGG	1 cut(s)	1555
TaaI	ACNGT	5 cut(s)	112, 633, 839, 1111, 1339
TaiI	ACGT	1 cut(s)	463
TaqI	TCGA	9 cut(s)	344, 351, 437, 526, 648, 1278, 1309, 1621, 1719
TauI	GCSGC	1 cut(s)	1673
TfiI	GAWTC	3 cut(s)	1024, 1413, 1468
Tru1I	TTAA	8 cut(s)	116, 425, 500, 635, 924, 1287, 1295, 1733
Tru9I	TTAA	8 cut(s)	116, 425, 500, 635, 924, 1287, 1295, 1733
TscAI	CASTG	1 cut(s)	842
TseFI	GTSAC	1 cut(s)	799
TseI	GCWGC	2 cut(s)	1041, 1673
Tsp45I	GTSAC	1 cut(s)	799
TspDTI	ATGAA	7 cut(s)	255, 270, 419, 1083, 1100, 1104, 1440
TspGWI	ACGGA	3 cut(s)	465, 1362, 1517
TspRI	CASTG	1 cut(s)	842
VpaK11BI	GGWCC	2 cut(s)	766, 1525
XapI	RAATTY	2 cut(s)	1148, 1544
XceI	RCATGY	2 cut(s)	724, 1630
XmnI	GAANNNNTTC	2 cut(s)	546, 1485
XspI	CTAG	4 cut(s)	251, 824, 1601, 1756
Zsp2I	ATGCAT	2 cut(s)	436, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.