Protein prenyltransferase alpha subunit repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10095 AT1G10095 AT1G10095 AT1G10095 |
| fragaria_vesca | FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 FvH4_6g01921 |
| malus_domestica | MD04G1230400.v1.1 MD12G1248000.v1.1 MD12G1248100.v1.1 MD12G1248600.v1.1 MD12G1248900.v1.1 |
| prunus_persica | Prupe.6G350300_v2.0.a1 Prupe.6G350300_v2.0.a1 Prupe.6G350300_v2.0.a1 Prupe.6G350300_v2.0.a1 Prupe.6G350300_v2.0.a1 Prupe.6G350300_v2.0.a1 Prupe.6G350300_v2.0.a1 |
| pyrus_communis | pycom04g20430 pycom12g22820 pycom12g22870 |
| rosa_chinensis | RchiOBHm_Chr3g0449661 |
| rosa_laevigata | RLG00000021254 RLG00000025810 |
| rosa_multiflora | Rmu_co8329731.1_g000001 Rmu_sc0007357.1_g000001 Rmu_sc0009629.1_g000011 Rmu_sc0010999.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00427560 |
| rosa_rugosa | Rorug02G0622600 |
| rosa_samantha | Rh2BG103900 Rh2CG106400 Rh2DG102200 Rh3AG020700 Rh3BG021400 Rh3CG019900 Rh3DG021200 Rh5CG118600 |
| rosa_wichuraiana | Rw3G001710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 4 cut(s) | 4256, 6145, 7987, 11423 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 92, 6505, 8341 |
| Acc65I | GGTACC | 1 cut(s) | 8938 |
| AccB1I | GGYRCC | 4 cut(s) | 7102, 8938, 10387, 15064 |
| AccBSI | CCGCTC | 1 cut(s) | 3650 |
| AccI | GTMKAC | 9 cut(s) | 57, 96, 2989, 7665, 8052, 9504, 10935, 12347, 12414 |
| AccII | CGCG | 5 cut(s) | 488, 6662, 7184, 11550, 11810 |
| AccIII | TCCGGA | 1 cut(s) | 14017 |
| AciI | CCGC | 8 cut(s) | 1176, 3650, 6660, 10472, 10772, 11870, 12642, 13238 |
| AclI | AACGTT | 2 cut(s) | 6426, 14685 |
| AclWI | GGATC | 8 cut(s) | 150, 1617, 3405, 11173, 11344, 13151, 14693, 14706 |
| AcvI | CACGTG | 2 cut(s) | 2253, 5548 |
| AcyI | GRCGYC | 3 cut(s) | 956, 11943, 12048 |
| AdeI | CACNNNGTG | 3 cut(s) | 12146, 12674, 13193 |
| AflII | CTTAAG | 2 cut(s) | 3997, 4198 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 5395, 14635 |
| AjnI | CCWGG | 6 cut(s) | 4014, 10332, 11508, 14455, 14672, 15405 |
| AleI | CACNNNNGTG | 1 cut(s) | 3515 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 13593, 13625 |
| Alw44I | GTGCAC | 2 cut(s) | 1358, 12982 |
| AlwI | GGATC | 8 cut(s) | 150, 1617, 3405, 11173, 11344, 13151, 14693, 14706 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 389, 2099, 3125, 8915, 10364, 14456 |
| Ama87I | CYCGRG | 3 cut(s) | 3661, 5826, 12908 |
| Aor13HI | TCCGGA | 1 cut(s) | 14017 |
| AoxI | GGCC | 8 cut(s) | 1633, 3147, 4011, 5745, 7464, 8099, 9303, 13040 |
| ApaI | GGGCCC | 1 cut(s) | 4015 |
| ApaLI | GTGCAC | 2 cut(s) | 1358, 12982 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 158, 190, 5359, 5391 |
| AseI | ATTAAT | 3 cut(s) | 3357, 10517, 13704 |
| Asp718I | GGTACC | 1 cut(s) | 8938 |
| AspLEI | GCGC | 3 cut(s) | 340, 7186, 15043 |
| AsuC2I | CCSGG | 4 cut(s) | 10594, 11947, 12052, 12311 |
| AsuII | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| AvaI | CYCGRG | 3 cut(s) | 3661, 5826, 12908 |
| AvaII | GGWCC | 7 cut(s) | 268, 4018, 5731, 6226, 6374, 15142, 15409 |
| AxyI | CCTNAGG | 1 cut(s) | 14340 |
| BaeGI | GKGCMC | 3 cut(s) | 1362, 4015, 12986 |
| BamHI | GGATCC | 1 cut(s) | 14698 |
| BanI | GGYRCC | 4 cut(s) | 7102, 8938, 10387, 15064 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 682, 714, 6348, 6380 |
| BauI | CACGAG | 5 cut(s) | 4920, 9949, 11134, 11149, 14110 |
| BbrPI | CACGTG | 2 cut(s) | 2253, 5548 |
| BbvCI | CCTCAGC | 1 cut(s) | 9774 |
| BceAI | ACGGC | 2 cut(s) | 3030, 15198 |
| BciT130I | CCWGG | 6 cut(s) | 4016, 10334, 11510, 14457, 14674, 15407 |
| BciVI | GTATCC | 2 cut(s) | 5641, 8416 |
| BcnI | CCSGG | 4 cut(s) | 10594, 11947, 12052, 12311 |
| BfmI | CTRYAG | 9 cut(s) | 465, 1146, 1890, 3894, 5605, 5736, 10962, 12951, 13623 |
| BfoI | RGCGCY | 1 cut(s) | 15044 |
| BfrI | CTTAAG | 2 cut(s) | 3997, 4198 |
| BfuI | GTATCC | 2 cut(s) | 5641, 8416 |
| BglII | AGATCT | 6 cut(s) | 5291, 6938, 8774, 10223, 13130, 13276 |
| Bme18I | GGWCC | 7 cut(s) | 268, 4018, 5731, 6226, 6374, 15142, 15409 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 5395, 14635 |
| BmeT110I | CYCGRG | 3 cut(s) | 3661, 5826, 12908 |
| BmrI | ACTGGG | 2 cut(s) | 10689, 11501 |
| BmuI | ACTGGG | 2 cut(s) | 10689, 11501 |
| BoxI | GACNNNNGTC | 1 cut(s) | 15147 |
| Bpu10I | CCTNAGC | 2 cut(s) | 4698, 9774 |
| Bpu14I | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| BpuMI | CCSGG | 4 cut(s) | 10594, 11947, 12052, 12311 |
| Bsa29I | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| BsaAI | YACGTR | 3 cut(s) | 2253, 5548, 11087 |
| BsaBI | GATNNNNATC | 4 cut(s) | 147, 825, 7779, 11049 |
| BsaHI | GRCGYC | 3 cut(s) | 956, 11943, 12048 |
| BsaI | GGTCTC | 3 cut(s) | 10458, 11992, 12097 |
| BsaWI | WCCGGW | 3 cut(s) | 5710, 6673, 14017 |
| Bse118I | RCCGGY | 2 cut(s) | 1901, 12563 |
| Bse21I | CCTNAGG | 1 cut(s) | 14340 |
| Bse8I | GATNNNNATC | 4 cut(s) | 147, 825, 7779, 11049 |
| BseAI | TCCGGA | 1 cut(s) | 14017 |
| BseBI | CCWGG | 6 cut(s) | 4016, 10334, 11510, 14457, 14674, 15407 |
| BseCI | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| BseJI | GATNNNNATC | 4 cut(s) | 147, 825, 7779, 11049 |
| BseSI | GKGCMC | 3 cut(s) | 1362, 4015, 12986 |
| BseYI | CCCAGC | 1 cut(s) | 5359 |
| Bsh1236I | CGCG | 5 cut(s) | 488, 6662, 7184, 11550, 11810 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1758 |
| BshFI | GGCC | 8 cut(s) | 1635, 3149, 4013, 5747, 7466, 8101, 9305, 13042 |
| BshNI | GGYRCC | 4 cut(s) | 7102, 8938, 10387, 15064 |
| BshVI | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| BsiEI | CGRYCG | 1 cut(s) | 1758 |
| BsiHKCI | CYCGRG | 3 cut(s) | 3661, 5826, 12908 |
| BsiSI | CCGG | 9 cut(s) | 1902, 5711, 6674, 10593, 11946, 12051, 12311, 12564, 14018 |
| BslFI | GGGAC | 6 cut(s) | 1740, 2863, 8599, 10051, 10871, 14738 |
| BsmBI | CGTCTC | 6 cut(s) | 1745, 6458, 7173, 9746, 11211, 15173 |
| BsmFI | GGGAC | 6 cut(s) | 1740, 2863, 8599, 10051, 10871, 14738 |
| BsmI | GAATGC | 7 cut(s) | 997, 4645, 6614, 8450, 9902, 13061, 15826 |
| BsnI | GGCC | 8 cut(s) | 1635, 3149, 4013, 5747, 7466, 8101, 9305, 13042 |
| Bso31I | GGTCTC | 3 cut(s) | 10458, 11992, 12097 |
| BsoBI | CYCGRG | 3 cut(s) | 3661, 5826, 12908 |
| Bsp119I | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| Bsp120I | GGGCCC | 1 cut(s) | 4011 |
| Bsp13I | TCCGGA | 1 cut(s) | 14017 |
| Bsp19I | CCATGG | 1 cut(s) | 15138 |
| Bsp68I | TCGCGA | 2 cut(s) | 488, 11550 |
| BspACI | CCGC | 8 cut(s) | 1176, 3650, 6660, 10472, 10772, 11870, 12642, 13238 |
| BspANI | GGCC | 8 cut(s) | 1635, 3149, 4013, 5747, 7466, 8101, 9305, 13042 |
| BspDI | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| BspEI | TCCGGA | 1 cut(s) | 14017 |
| BspFNI | CGCG | 5 cut(s) | 488, 6662, 7184, 11550, 11810 |
| BspHI | TCATGA | 5 cut(s) | 3571, 4375, 7849, 13243, 15058 |
| BspMAI | CTGCAG | 5 cut(s) | 469, 1150, 5609, 5740, 13627 |
| BspPI | GGATC | 8 cut(s) | 150, 1617, 3405, 11173, 11344, 13151, 14693, 14706 |
| BspT104I | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| BspT107I | GGYRCC | 4 cut(s) | 7102, 8938, 10387, 15064 |
| BspTI | CTTAAG | 2 cut(s) | 3997, 4198 |
| BspTNI | GGTCTC | 3 cut(s) | 10458, 11992, 12097 |
| BsrBI | CCGCTC | 1 cut(s) | 3650 |
| BsrFI | RCCGGY | 2 cut(s) | 1901, 12563 |
| BssAI | RCCGGY | 2 cut(s) | 1901, 12563 |
| BssNI | GRCGYC | 3 cut(s) | 956, 11943, 12048 |
| BssSI | CACGAG | 5 cut(s) | 4920, 9949, 11134, 11149, 14110 |
| Bst2BI | CACGAG | 5 cut(s) | 4920, 9949, 11134, 11149, 14110 |
| Bst2UI | CCWGG | 6 cut(s) | 4016, 10334, 11510, 14457, 14674, 15407 |
| BstACI | GRCGYC | 3 cut(s) | 956, 11943, 12048 |
| BstAFI | CTTAAG | 2 cut(s) | 3997, 4198 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 907, 1154, 6428, 7886, 10250 |
| BstBAI | YACGTR | 3 cut(s) | 2253, 5548, 11087 |
| BstBI | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| BstDSI | CCRYGG | 4 cut(s) | 2787, 4347, 10815, 15138 |
| BstEII | GGTNACC | 3 cut(s) | 2491, 3349, 4342 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 779 |
| BstFNI | CGCG | 5 cut(s) | 488, 6662, 7184, 11550, 11810 |
| BstH2I | RGCGCY | 1 cut(s) | 15044 |
| BstHHI | GCGC | 3 cut(s) | 340, 7186, 15043 |
| BstMCI | CGRYCG | 1 cut(s) | 1758 |
| BstNI | CCWGG | 6 cut(s) | 4016, 10334, 11510, 14457, 14674, 15407 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 15147 |
| BstPI | GGTNACC | 3 cut(s) | 2491, 3349, 4342 |
| BstSFI | CTRYAG | 9 cut(s) | 465, 1146, 1890, 3894, 5605, 5736, 10962, 12951, 13623 |
| BstSLI | GKGCMC | 3 cut(s) | 1362, 4015, 12986 |
| BstUI | CGCG | 5 cut(s) | 488, 6662, 7184, 11550, 11810 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 12011, 12116 |
| Bsu15I | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| Bsu36I | CCTNAGG | 1 cut(s) | 14340 |
| BsuI | GTATCC | 2 cut(s) | 5641, 8416 |
| BsuRI | GGCC | 8 cut(s) | 1635, 3149, 4013, 5747, 7466, 8101, 9305, 13042 |
| BsuTUI | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| BtgI | CCRYGG | 4 cut(s) | 2787, 4347, 10815, 15138 |
| BtgZI | GCGATG | 2 cut(s) | 4017, 10882 |
| BtsI | GCAGTG | 2 cut(s) | 11715, 13173 |
| BtuMI | TCGCGA | 2 cut(s) | 488, 11550 |
| CaiI | CAGNNNCTG | 6 cut(s) | 389, 2099, 3125, 8915, 10364, 14456 |
| CciI | TCATGA | 5 cut(s) | 3571, 4375, 7849, 13243, 15058 |
| CfoI | GCGC | 3 cut(s) | 340, 7186, 15043 |
| Cfr10I | RCCGGY | 2 cut(s) | 1901, 12563 |
| ClaI | ATCGAT | 3 cut(s) | 2172, 3432, 13923 |
| CseI | GACGC | 6 cut(s) | 964, 7190, 7307, 11951, 12056, 12313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 11364, 11399 |
| DraI | TTTAAA | 1 cut(s) | 2859 |
| DraIII | CACNNNGTG | 3 cut(s) | 12146, 12674, 13193 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 92, 6505, 8341 |
| DriI | GACNNNNNGTC | 2 cut(s) | 5395, 14635 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 92, 6505, 8341 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 5395, 14635 |
| Ecl136II | GAGCTC | 8 cut(s) | 2211, 4581, 7482, 10689, 11908, 12376, 14032, 14176 |
| Eco31I | GGTCTC | 3 cut(s) | 10458, 11992, 12097 |
| Eco32I | GATATC | 4 cut(s) | 2170, 3313, 3430, 12289 |
| Eco47I | GGWCC | 7 cut(s) | 268, 4018, 5731, 6226, 6374, 15142, 15409 |
| Eco53kI | GAGCTC | 8 cut(s) | 2211, 4581, 7482, 10689, 11908, 12376, 14032, 14176 |
| Eco72I | CACGTG | 2 cut(s) | 2253, 5548 |
| Eco81I | CCTNAGG | 1 cut(s) | 14340 |
| Eco88I | CYCGRG | 3 cut(s) | 3661, 5826, 12908 |
| Eco91I | GGTNACC | 3 cut(s) | 2491, 3349, 4342 |
| EcoICRI | GAGCTC | 8 cut(s) | 2211, 4581, 7482, 10689, 11908, 12376, 14032, 14176 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 779 |
| EcoO109I | RGGNCCY | 4 cut(s) | 4011, 4012, 5731, 15409 |
| EcoO65I | GGTNACC | 3 cut(s) | 2491, 3349, 4342 |
| EcoRI | GAATTC | 1 cut(s) | 4290 |
| EcoRII | CCWGG | 6 cut(s) | 4014, 10332, 11508, 14455, 14672, 15405 |
| EcoRV | GATATC | 4 cut(s) | 2170, 3313, 3430, 12289 |
| EcoT22I | ATGCAT | 5 cut(s) | 1159, 6614, 6853, 8450, 9902 |
| Esp3I | CGTCTC | 6 cut(s) | 1745, 6458, 7173, 9746, 11211, 15173 |
| FaqI | GGGAC | 6 cut(s) | 1740, 2863, 8599, 10051, 10871, 14738 |
| FblI | GTMKAC | 9 cut(s) | 57, 96, 2989, 7665, 8052, 9504, 10935, 12347, 12414 |
| GlaI | GCGC | 3 cut(s) | 339, 7185, 15042 |
| GsaI | CCCAGC | 1 cut(s) | 5363 |
| HaeII | RGCGCY | 1 cut(s) | 15044 |
| HaeIII | GGCC | 8 cut(s) | 1635, 3149, 4013, 5747, 7466, 8101, 9305, 13042 |
| HapII | CCGG | 9 cut(s) | 1902, 5711, 6674, 10593, 11946, 12051, 12311, 12564, 14018 |
| HgaI | GACGC | 6 cut(s) | 964, 7190, 7307, 11951, 12056, 12313 |
| HhaI | GCGC | 3 cut(s) | 340, 7186, 15043 |
| Hin1I | GRCGYC | 3 cut(s) | 956, 11943, 12048 |
| Hin6I | GCGC | 3 cut(s) | 338, 7184, 15041 |
| HinP1I | GCGC | 3 cut(s) | 338, 7184, 15041 |
| HincII | GTYRAC | 4 cut(s) | 97, 1705, 3256, 13758 |
| HindII | GTYRAC | 4 cut(s) | 97, 1705, 3256, 13758 |
| HpaI | GTTAAC | 1 cut(s) | 13758 |
| HpaII | CCGG | 9 cut(s) | 1902, 5711, 6674, 10593, 11946, 12051, 12311, 12564, 14018 |
| Hpy99I | CGWCG | 3 cut(s) | 7937, 9719, 10853 |
| HpyCH4IV | ACGT | 9 cut(s) | 2252, 3109, 4029, 5547, 6426, 9714, 11086, 13972, 14685 |
| HpySE526I | ACGT | 9 cut(s) | 2252, 3109, 4029, 5547, 6426, 9714, 11086, 13972, 14685 |
| Hsp92I | GRCGYC | 3 cut(s) | 956, 11943, 12048 |
| HspAI | GCGC | 3 cut(s) | 338, 7184, 15041 |
| Kpn2I | TCCGGA | 1 cut(s) | 14017 |
| KpnI | GGTACC | 1 cut(s) | 8942 |
| KspAI | GTTAAC | 1 cut(s) | 13758 |
| MaeII | ACGT | 9 cut(s) | 2252, 3109, 4029, 5547, 6426, 9714, 11086, 13972, 14685 |
| MbiI | CCGCTC | 1 cut(s) | 3650 |
| MfeI | CAATTG | 6 cut(s) | 5922, 8286, 9969, 11451, 14661, 14865 |
| Mph1103I | ATGCAT | 5 cut(s) | 1159, 6614, 6853, 8450, 9902 |
| MroI | TCCGGA | 1 cut(s) | 14017 |
| MslI | CAYNNNNRTG | 5 cut(s) | 3515, 12396, 13461, 14298, 15657 |
| MspCI | CTTAAG | 2 cut(s) | 3997, 4198 |
| MspI | CCGG | 9 cut(s) | 1902, 5711, 6674, 10593, 11946, 12051, 12311, 12564, 14018 |
| MunI | CAATTG | 6 cut(s) | 5922, 8286, 9969, 11451, 14661, 14865 |
| Mva1269I | GAATGC | 7 cut(s) | 997, 4645, 6614, 8450, 9902, 13061, 15826 |
| MvaI | CCWGG | 6 cut(s) | 4016, 10334, 11510, 14457, 14674, 15407 |
| MvnI | CGCG | 5 cut(s) | 488, 6662, 7184, 11550, 11810 |
| NciI | CCSGG | 4 cut(s) | 10594, 11947, 12052, 12311 |
| NcoI | CCATGG | 1 cut(s) | 15138 |
| NmeAIII | GCCGAG | 3 cut(s) | 3841, 6511, 13101 |
| NruI | TCGCGA | 2 cut(s) | 488, 11550 |
| NsiI | ATGCAT | 5 cut(s) | 1159, 6614, 6853, 8450, 9902 |
| NspV | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| OliI | CACNNNNGTG | 1 cut(s) | 3515 |
| PaeI | GCATGC | 1 cut(s) | 3242 |
| PaeR7I | CTCGAG | 1 cut(s) | 5826 |
| PagI | TCATGA | 5 cut(s) | 3571, 4375, 7849, 13243, 15058 |
| PaqCI | CACCTGC | 4 cut(s) | 4256, 6145, 7987, 11423 |
| PasI | CCCWGGG | 1 cut(s) | 14673 |
| PciI | ACATGT | 9 cut(s) | 559, 4790, 5039, 5267, 6914, 8588, 8750, 10040, 10202 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1764, 11199 |
| PctI | GAATGC | 7 cut(s) | 997, 4645, 6614, 8450, 9902, 13061, 15826 |
| PflFI | GACNNNGTC | 1 cut(s) | 3026 |
| PfoI | TCCNGGA | 3 cut(s) | 10332, 12309, 15405 |
| PmaCI | CACGTG | 2 cut(s) | 2253, 5548 |
| PmlI | CACGTG | 2 cut(s) | 2253, 5548 |
| Ppu21I | YACGTR | 3 cut(s) | 2253, 5548, 11087 |
| PpuMI | RGGWCCY | 2 cut(s) | 5731, 15409 |
| PscI | ACATGT | 9 cut(s) | 559, 4790, 5039, 5267, 6914, 8588, 8750, 10040, 10202 |
| PshAI | GACNNNNGTC | 1 cut(s) | 15147 |
| PshBI | ATTAAT | 3 cut(s) | 3357, 10517, 13704 |
| Psp124BI | GAGCTC | 8 cut(s) | 2213, 4583, 7484, 10691, 11910, 12378, 14034, 14178 |
| Psp1406I | AACGTT | 2 cut(s) | 6426, 14685 |
| Psp5II | RGGWCCY | 2 cut(s) | 5731, 15409 |
| Psp6I | CCWGG | 6 cut(s) | 4014, 10332, 11508, 14455, 14672, 15405 |
| PspCI | CACGTG | 2 cut(s) | 2253, 5548 |
| PspEI | GGTNACC | 3 cut(s) | 2491, 3349, 4342 |
| PspFI | CCCAGC | 1 cut(s) | 5359 |
| PspGI | CCWGG | 6 cut(s) | 4014, 10332, 11508, 14455, 14672, 15405 |
| PspOMI | GGGCCC | 1 cut(s) | 4011 |
| PspPPI | RGGWCCY | 2 cut(s) | 5731, 15409 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1143, 1175 |
| PstI | CTGCAG | 5 cut(s) | 469, 1150, 5609, 5740, 13627 |
| PstNI | CAGNNNCTG | 6 cut(s) | 389, 2099, 3125, 8915, 10364, 14456 |
| PsyI | GACNNNGTC | 1 cut(s) | 3026 |
| RruI | TCGCGA | 2 cut(s) | 488, 11550 |
| RseI | CAYNNNNRTG | 5 cut(s) | 3515, 12396, 13461, 14298, 15657 |
| SacI | GAGCTC | 8 cut(s) | 2213, 4583, 7484, 10691, 11910, 12378, 14034, 14178 |
| SalI | GTCGAC | 1 cut(s) | 95 |
| SfcI | CTRYAG | 9 cut(s) | 465, 1146, 1890, 3894, 5605, 5736, 10962, 12951, 13623 |
| Sfr274I | CTCGAG | 1 cut(s) | 5826 |
| SfuI | TTCGAA | 3 cut(s) | 7010, 8846, 10295 |
| SinI | GGWCC | 7 cut(s) | 268, 4018, 5731, 6226, 6374, 15142, 15409 |
| SlaI | CTCGAG | 1 cut(s) | 5826 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 3515, 12396, 13461, 14298, 15657 |
| SphI | GCATGC | 1 cut(s) | 3242 |
| SsiI | CCGC | 8 cut(s) | 1176, 3650, 6660, 10472, 10772, 11870, 12642, 13238 |
| SspI | AATATT | 5 cut(s) | 4681, 5446, 7173, 9009, 10458 |
| SstI | GAGCTC | 8 cut(s) | 2213, 4583, 7484, 10691, 11910, 12378, 14034, 14178 |
| TaiI | ACGT | 9 cut(s) | 2255, 3112, 4032, 5550, 6429, 9717, 11089, 13975, 14688 |
| TauI | GCSGC | 2 cut(s) | 6662, 10474 |
| TspGWI | ACGGA | 9 cut(s) | 23, 1222, 2804, 3557, 5549, 6143, 10744, 11332, 13541 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3026 |
| Vha464I | CTTAAG | 2 cut(s) | 3997, 4198 |
| VneI | GTGCAC | 2 cut(s) | 1358, 12982 |
| VpaK11BI | GGWCC | 7 cut(s) | 268, 4018, 5731, 6226, 6374, 15142, 15409 |
| VspI | ATTAAT | 3 cut(s) | 3357, 10517, 13704 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 779 |
| XbaI | TCTAGA | 5 cut(s) | 2125, 11608, 13127, 13279, 15752 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 136 |
| XhoI | CTCGAG | 1 cut(s) | 5826 |
| XmiI | GTMKAC | 9 cut(s) | 57, 96, 2989, 7665, 8052, 9504, 10935, 12347, 12414 |
| Zsp2I | ATGCAT | 5 cut(s) | 1159, 6614, 6853, 8450, 9902 |