AT1G08660

Glycosyltransferase family 29 (sialyltransferase)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
2756904 .. 2759889
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08660.2

Sequence Viewer

Length: 1425 bp
ATGAGATCTCACCAAGCTGGCCGCAAACTTCCGCTTCTTCAACTTCTCGGCTGCGTCGCTGTTTTCTCCGTTTTCGTTTTCACCATCCAATCTTCCTTCTTCGCAGATAATAATCGTAAACTAGATCTTCAGCCGGAAGATATCCAGATCTTGTCAGATTTTCAGTCCAGCGTTCAACAGTGCGTGGCTAACAGAGGGCTTGGACTCTCTGCCCATATTATCGATCACTGTAATCTTATCCTCAAGTTCCCTGAAGGCACTAACAGTACTTGGTACAATGCACAATTTAAAGTTTTTGAAGCATTGGAGTTCAAGTATAATGTTTGTGAGGCAGTTCTCTTATGGGAGCAGTACCGCAATATGACTACAGTATTGACAAGAGAATACCTCGATGTACGCCCTGATGGGTGGTTGGACTACGCAGCTATGAGAATTGCACAGTTGGGAGCTGATAAGTGTTATAATCGTACATTGTGTGAAGAGCATCTTAATGTGATTCTTCCAGCGAAGCCTCCTTTTCACCCACGGCAGTTTCATAAATGCGCTGTTGTTGGAAATTCTGGAGATCTGTTAAAAACAGAGTTCGGAGAAGAGATTGACAGTCATGATGCTGTATTTCGAGACAATGAAGCTCCTGTCAATGAGAAGTATGCCAAGTACGTAGGAGTGAAAAGGGATTTCCGACTAGTTGTTCGTGGTGCAGCTCGTAACATGATTAAGATTCTCAATGGGTCTGACAATGAAGTGCTTATAATAAAAAGTGTGACCCACCGAGACTTCAATGAAATGATAAAGCGTATACCAAACCCTGTTTATCTTTTCCAAGGAATTGTCCTACGCAGAGGTGCCAAAGGAACCGGGATGAAATCCATTGAACTAGCATTGTCCATGTGCGATATTGTTGACATATATGGTTTCACTGTTGATCCTGGATACACAGAGTGGACGCGTTACTTTTCCACGCCAAGGAAAGGGCACAACCCACTTCAAGGAAGGGCATACTACCAACTTCTAGAGTGTCTTGGTGTAATACGGATCCATTCTCCCATGAGATCCGAGAGAAAGGAGGACTGGTCAAGTGTGCCAAGTCGTGAAATGATAAGCAGAGCTCACACAGCTGCCTTACGCCTACAAAGGAGCCAACAGCCAACTAGTTCGAAGAGGGATGGGTCAGGACAATTCGGTAATTGCAAGGTGTGGGGCGATGCAGACCCTACAAAAGGACCTGTCTCGGGATCTCCGGACATGAGTGAGACCAGGAAGAAGTCAAATTACAAGAAATGGGAAGTGATGCCGTTTAGGAGCTTAAGAAAGGAAGCTAGGGATCACTATATCCAAATGAAAGGCGTGTCACAGTATAAGATGGATGGAAATAAGCTGGACGATCTGGTTTGCGTGAGGCATCCACTGAAATTAGATACGTAA

Protein Analysis

474

Amino Acids

54.22

Weight (kDa)

9.07

Isoelectric Point (pI)

38.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_29 PF00777 167 - 261 7.8e-19 Glycosyltransferase family 29 (sialyltransferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010708)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 462, 752
AccB1I GGYRCC 1 cut(s) 845
AccI GTMKAC 1 cut(s) 799
AccII CGCG 1 cut(s) 949
AccIII TCCGGA 1 cut(s) 1240
AciI CCGC 3 cut(s) 22, 32, 355
AclWI GGATC 6 cut(s) 920, 1030, 1043, 1047, 1243, 1332
AcoI YGGCCR 1 cut(s) 19
AcsI RAATTY 1 cut(s) 556
AcuI CTGAAG 2 cut(s) 113, 273
AdeI CACNNNGTG 1 cut(s) 942
AfaI GTAC 6 cut(s) 268, 275, 353, 396, 469, 659
AfiI CCNNNNNNNGG 5 cut(s) 966, 971, 989, 1220, 1232
AflII CTTAAG 1 cut(s) 1306
AflIII ACRYGT 1 cut(s) 947
AgsI TTSAA 7 cut(s) 41, 176, 299, 313, 781, 875, 989
AhlI ACTAGT 2 cut(s) 685, 1151
AjnI CCWGG 2 cut(s) 928, 1256
Alw21I GWGCWC 1 cut(s) 1111
Alw26I GTCTC 4 cut(s) 615, 768, 1234, 1247
AlwI GGATC 6 cut(s) 920, 1030, 1043, 1047, 1243, 1332
Ama87I CYCGRG 1 cut(s) 1231
Aor13HI TCCGGA 1 cut(s) 1240
AoxI GGCC 1 cut(s) 19
ApeKI GCWGC 4 cut(s) 51, 422, 701, 1118
ApoI RAATTY 1 cut(s) 556
ArsI GACNNNNNNTTYG 2 cut(s) 675, 707
AspLEI GCGC 1 cut(s) 545
AspS9I GGNCC 1 cut(s) 1223
AsuC2I CCSGG 1 cut(s) 859
AsuHPI GGTGA 2 cut(s) 73, 512
AsuII TTCGAA 1 cut(s) 1157
AvaI CYCGRG 1 cut(s) 1231
AvaII GGWCC 1 cut(s) 1223
BaeGI GKGCMC 1 cut(s) 978
BamHI GGATCC 1 cut(s) 1035
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 1 cut(s) 1111
BarI GAAGNNNNNNTAC 2 cut(s) 1256, 1288
Bbv12I GWGCWC 1 cut(s) 1111
BbvI GCAGC 4 cut(s) 38, 434, 713, 1105
BccI CCATC 5 cut(s) 92, 398, 1160, 1357, 1361
BceAI ACGGC 2 cut(s) 542, 1279
BciT130I CCWGG 2 cut(s) 930, 1258
BciVI GTATCC 1 cut(s) 926
BcnI CCSGG 1 cut(s) 859
BcoDI GTCTC 4 cut(s) 615, 768, 1234, 1247
BcuI ACTAGT 2 cut(s) 685, 1151
BfaI CTAG 6 cut(s) 122, 686, 878, 1013, 1152, 1320
BfmI CTRYAG 1 cut(s) 366
BfrI CTTAAG 1 cut(s) 1306
BfuI GTATCC 1 cut(s) 926
BglII AGATCT 4 cut(s) 5, 124, 147, 565
BisI GCNGC 5 cut(s) 22, 52, 423, 702, 1119
BlsI GCNGC 5 cut(s) 23, 53, 424, 703, 1120
BmcAI AGTACT 1 cut(s) 268
Bme1390I CCNGG 3 cut(s) 859, 930, 1258
Bme18I GGWCC 1 cut(s) 1223
BmeT110I CYCGRG 1 cut(s) 1231
BmgT120I GGNCC 1 cut(s) 1223
BmiI GGNNCC 4 cut(s) 847, 856, 1037, 1139
BmrFI CCNGG 3 cut(s) 859, 930, 1258
BmsI GCATC 5 cut(s) 493, 598, 1195, 1281, 1411
BplI GAGNNNNNCTC 2 cut(s) 372, 404
BpmI CTGGAG 1 cut(s) 582
Bpu14I TTCGAA 1 cut(s) 1157
BpuEI CTTGAG 1 cut(s) 227
BpuMI CCSGG 1 cut(s) 859
Bsa29I ATCGAT 1 cut(s) 222
BsaAI YACGTR 2 cut(s) 661, 1422
BsaBI GATNNNNATC 1 cut(s) 111
BsaI GGTCTC 1 cut(s) 1247
BsaJI CCNNGG 3 cut(s) 524, 823, 965
BsaWI WCCGGW 1 cut(s) 1240
BsaXI ACNNNNNCTCC 4 cut(s) 299, 329, 1058, 1088
Bsc4I CCNNNNNNNGG 5 cut(s) 966, 971, 989, 1220, 1232
Bse1I ACTGG 1 cut(s) 1076
Bse8I GATNNNNATC 1 cut(s) 111
BseAI TCCGGA 1 cut(s) 1240
BseBI CCWGG 2 cut(s) 930, 1258
BseCI ATCGAT 1 cut(s) 222
BseDI CCNNGG 3 cut(s) 524, 823, 965
BseGI GGATG 5 cut(s) 84, 867, 1171, 1372, 1402
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 5 cut(s) 966, 971, 989, 1220, 1232
BseNI ACTGG 1 cut(s) 1076
BseSI GKGCMC 1 cut(s) 978
BseXI GCAGC 4 cut(s) 38, 434, 713, 1105
BsgI GTGCAG 1 cut(s) 720
Bsh1236I CGCG 1 cut(s) 949
BshFI GGCC 1 cut(s) 21
BshNI GGYRCC 1 cut(s) 845
BshVI ATCGAT 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 1111
BsiHKCI CYCGRG 1 cut(s) 1231
BsiSI CCGG 3 cut(s) 134, 858, 1241
BslI CCNNNNNNNGG 5 cut(s) 966, 971, 989, 1220, 1232
BsmAI GTCTC 4 cut(s) 615, 768, 1234, 1247
BsnI GGCC 1 cut(s) 21
Bso31I GGTCTC 1 cut(s) 1247
BsoBI CYCGRG 1 cut(s) 1231
Bsp119I TTCGAA 1 cut(s) 1157
Bsp1286I GDGCHC 2 cut(s) 978, 1111
Bsp13I TCCGGA 1 cut(s) 1240
BspACI CCGC 3 cut(s) 22, 32, 355
BspANI GGCC 1 cut(s) 21
BspDI ATCGAT 1 cut(s) 222
BspEI TCCGGA 1 cut(s) 1240
BspFNI CGCG 1 cut(s) 949
BspHI TCATGA 1 cut(s) 604
BspLI GGNNCC 4 cut(s) 847, 856, 1037, 1139
BspPI GGATC 6 cut(s) 920, 1030, 1043, 1047, 1243, 1332
BspQI GCTCTTC 1 cut(s) 474
BspT104I TTCGAA 1 cut(s) 1157
BspT107I GGYRCC 1 cut(s) 845
BspTI CTTAAG 1 cut(s) 1306
BspTNI GGTCTC 1 cut(s) 1247
BsrI ACTGG 1 cut(s) 1076
BssECI CCNNGG 3 cut(s) 524, 823, 965
BssNAI GTATAC 1 cut(s) 800
BssT1I CCWWGG 2 cut(s) 823, 965
Bst1107I GTATAC 1 cut(s) 800
Bst2UI CCWGG 2 cut(s) 930, 1258
Bst4CI ACNGT 8 cut(s) 180, 230, 266, 370, 441, 602, 922, 1356
Bst6I CTCTTC 3 cut(s) 474, 585, 1154
BstAFI CTTAAG 1 cut(s) 1306
BstBAI YACGTR 2 cut(s) 661, 1422
BstBI TTCGAA 1 cut(s) 1157
BstC8I GCNNGC 1 cut(s) 19
BstDSI CCRYGG 1 cut(s) 524
BstENI CCTNNNNNAGG 1 cut(s) 1218
BstF5I GGATG 5 cut(s) 84, 867, 1171, 1372, 1402
BstFNI CGCG 1 cut(s) 949
BstHHI GCGC 1 cut(s) 545
BstMAI GTCTC 4 cut(s) 615, 768, 1234, 1247
BstMWI GCNNNNNNNGC 1 cut(s) 1115
BstNI CCWGG 2 cut(s) 930, 1258
BstSCI CCNGG 3 cut(s) 857, 928, 1256
BstSFI CTRYAG 1 cut(s) 366
BstSLI GKGCMC 1 cut(s) 978
BstSNI TACGTA 2 cut(s) 661, 1422
BstUI CGCG 1 cut(s) 949
BstV1I GCAGC 4 cut(s) 38, 434, 713, 1105
BstX2I RGATCY 7 cut(s) 5, 124, 147, 565, 1035, 1052, 1235
BstYI RGATCY 7 cut(s) 5, 124, 147, 565, 1035, 1052, 1235
BstZ17I GTATAC 1 cut(s) 800
Bsu15I ATCGAT 1 cut(s) 222
BsuI GTATCC 1 cut(s) 926
BsuRI GGCC 1 cut(s) 21
BsuTUI ATCGAT 1 cut(s) 222
BtgI CCRYGG 1 cut(s) 524
BtgZI GCGATG 1 cut(s) 1218
BtsCI GGATG 5 cut(s) 84, 867, 1171, 1372, 1402
BtsIMutI CAGTG 4 cut(s) 185, 226, 918, 1406
Cac8I GCNNGC 1 cut(s) 19
CciI TCATGA 1 cut(s) 604
CfoI GCGC 1 cut(s) 545
Cfr13I GGNCC 1 cut(s) 1223
ClaI ATCGAT 1 cut(s) 222
CseI GACGC 2 cut(s) 43, 955
Csp6I GTAC 6 cut(s) 267, 274, 352, 395, 468, 658
CviAII CATG 5 cut(s) 605, 712, 889, 1048, 1246
CviQI GTAC 6 cut(s) 267, 274, 352, 395, 468, 658
DraI TTTAAA 1 cut(s) 289
DraIII CACNNNGTG 1 cut(s) 942
EaeI YGGCCR 1 cut(s) 19
Eam1104I CTCTTC 3 cut(s) 474, 585, 1154
EarI CTCTTC 3 cut(s) 474, 585, 1154
Ecl136II GAGCTC 1 cut(s) 1109
Eco105I TACGTA 2 cut(s) 661, 1422
Eco130I CCWWGG 2 cut(s) 823, 965
Eco24I GRGCYC 1 cut(s) 1111
Eco31I GGTCTC 1 cut(s) 1247
Eco32I GATATC 1 cut(s) 142
Eco47I GGWCC 1 cut(s) 1223
Eco53kI GAGCTC 1 cut(s) 1109
Eco57I CTGAAG 2 cut(s) 113, 273
Eco88I CYCGRG 1 cut(s) 1231
EcoICRI GAGCTC 1 cut(s) 1109
EcoNI CCTNNNNNAGG 1 cut(s) 1218
EcoO109I RGGNCCY 1 cut(s) 1223
EcoRII CCWGG 2 cut(s) 928, 1256
EcoRV GATATC 1 cut(s) 142
EcoT14I CCWWGG 2 cut(s) 823, 965
EcoT38I GRGCYC 1 cut(s) 1111
ErhI CCWWGG 2 cut(s) 823, 965
FaeI CATG 5 cut(s) 608, 715, 892, 1051, 1249
FalI AAGNNNNNCTT 2 cut(s) 471, 503
FatI CATG 5 cut(s) 604, 711, 888, 1047, 1245
FblI GTMKAC 1 cut(s) 799
Fnu4HI GCNGC 5 cut(s) 22, 52, 423, 702, 1119
FokI GGATG 5 cut(s) 71, 874, 1178, 1379, 1389
FriOI GRGCYC 1 cut(s) 1111
Fsp4HI GCNGC 5 cut(s) 22, 52, 423, 702, 1119
FspBI CTAG 6 cut(s) 122, 686, 878, 1013, 1152, 1320
GlaI GCGC 1 cut(s) 544
GluI GCNGC 5 cut(s) 22, 52, 423, 702, 1119
GsuI CTGGAG 1 cut(s) 582
HaeIII GGCC 1 cut(s) 21
HapII CCGG 3 cut(s) 134, 858, 1241
HgaI GACGC 2 cut(s) 43, 955
HhaI GCGC 1 cut(s) 545
Hin1II CATG 5 cut(s) 608, 715, 892, 1051, 1249
Hin6I GCGC 1 cut(s) 543
HinP1I GCGC 1 cut(s) 543
HincII GTYRAC 1 cut(s) 904
HindII GTYRAC 1 cut(s) 904
HinfI GANTC 3 cut(s) 204, 496, 721
HpaII CCGG 3 cut(s) 134, 858, 1241
HphI GGTGA 2 cut(s) 73, 512
Hpy166II GTNNAC 4 cut(s) 119, 800, 904, 945
Hpy188I TCNGA 5 cut(s) 157, 587, 683, 736, 1057
Hpy188III TCNNGA 9 cut(s) 145, 561, 605, 620, 1013, 1091, 1173, 1233, 1241
Hpy8I GTNNAC 4 cut(s) 119, 800, 904, 945
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 3 cut(s) 106, 248, 987
HpyCH4III ACNGT 8 cut(s) 180, 230, 266, 370, 441, 602, 922, 1356
HpyCH4IV ACGT 2 cut(s) 660, 1421
HpyCH4V TGCA 5 cut(s) 281, 437, 701, 1191, 1208
HpyF10VI GCNNNNNNNGC 1 cut(s) 1115
HpySE526I ACGT 2 cut(s) 660, 1421
Hsp92II CATG 5 cut(s) 608, 715, 892, 1051, 1249
HspAI GCGC 1 cut(s) 543
Kpn2I TCCGGA 1 cut(s) 1240
LguI GCTCTTC 1 cut(s) 474
LmnI GCTCC 5 cut(s) 346, 446, 637, 1137, 1302
Lsp1109I GCAGC 4 cut(s) 38, 434, 713, 1105
LweI GCATC 5 cut(s) 493, 598, 1195, 1281, 1411
MaeI CTAG 6 cut(s) 122, 686, 878, 1013, 1152, 1320
MaeII ACGT 2 cut(s) 660, 1421
MaeIII GTNAC 4 cut(s) 707, 763, 950, 1350
MflI RGATCY 7 cut(s) 5, 124, 147, 565, 1035, 1052, 1235
MhlI GDGCHC 2 cut(s) 978, 1111
MluCI AATT 8 cut(s) 284, 432, 556, 828, 1178, 1186, 1270, 1412
MluI ACGCGT 1 cut(s) 947
MlyI GAGTC 1 cut(s) 198
MmeI TCCRAC 3 cut(s) 393, 532, 706
MnlI CCTC 9 cut(s) 188, 251, 322, 398, 522, 836, 1060, 1155, 1392
MroI TCCGGA 1 cut(s) 1240
MseI TTAA 5 cut(s) 288, 489, 572, 717, 1307
MslI CAYNNNNRTG 1 cut(s) 489
MspA1I CMGCKG 1 cut(s) 1118
MspCI CTTAAG 1 cut(s) 1306
MspI CCGG 3 cut(s) 134, 858, 1241
MspR9I CCNGG 3 cut(s) 859, 930, 1258
MvaI CCWGG 2 cut(s) 930, 1258
MvnI CGCG 1 cut(s) 949
MwoI GCNNNNNNNGC 1 cut(s) 1115
NciI CCSGG 1 cut(s) 859
NlaIII CATG 5 cut(s) 608, 715, 892, 1051, 1249
NlaIV GGNNCC 4 cut(s) 847, 856, 1037, 1139
NmeAIII GCCGAG 1 cut(s) 27
NmuCI GTSAC 2 cut(s) 763, 1350
NspV TTCGAA 1 cut(s) 1157
PagI TCATGA 1 cut(s) 604
PciSI GCTCTTC 1 cut(s) 474
PfeI GAWTC 2 cut(s) 496, 721
PfoI TCCNGGA 1 cut(s) 928
PkrI GCNGC 5 cut(s) 23, 53, 424, 703, 1120
PleI GAGTC 1 cut(s) 198
PpsI GAGTC 1 cut(s) 198
Ppu21I YACGTR 2 cut(s) 661, 1422
PpuMI RGGWCCY 1 cut(s) 1223
PsiI TTATAA 2 cut(s) 462, 752
Psp124BI GAGCTC 1 cut(s) 1111
Psp5II RGGWCCY 1 cut(s) 1223
Psp6I CCWGG 2 cut(s) 928, 1256
PspGI CCWGG 2 cut(s) 928, 1256
PspN4I GGNNCC 4 cut(s) 847, 856, 1037, 1139
PspPI GGNCC 1 cut(s) 1223
PspPPI RGGWCCY 1 cut(s) 1223
PsuI RGATCY 7 cut(s) 5, 124, 147, 565, 1035, 1052, 1235
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 6 cut(s) 268, 275, 353, 396, 469, 659
RsaNI GTAC 6 cut(s) 267, 274, 352, 395, 468, 658
RseI CAYNNNNRTG 1 cut(s) 489
SacI GAGCTC 1 cut(s) 1111
SapI GCTCTTC 1 cut(s) 474
SaqAI TTAA 5 cut(s) 288, 489, 572, 717, 1307
SatI GCNGC 5 cut(s) 22, 52, 423, 702, 1119
Sau96I GGNCC 1 cut(s) 1223
ScaI AGTACT 1 cut(s) 268
SchI GAGTC 1 cut(s) 198
ScrFI CCNGG 3 cut(s) 859, 930, 1258
SduI GDGCHC 2 cut(s) 978, 1111
SfaNI GCATC 5 cut(s) 493, 598, 1195, 1281, 1411
SfcI CTRYAG 1 cut(s) 366
SfuI TTCGAA 1 cut(s) 1157
SinI GGWCC 1 cut(s) 1223
SmiMI CAYNNNNRTG 1 cut(s) 489
SmlI CTYRAG 2 cut(s) 242, 1306
SmoI CTYRAG 2 cut(s) 242, 1306
SnaBI TACGTA 2 cut(s) 661, 1422
SpeI ACTAGT 2 cut(s) 685, 1151
Sse9I AATT 8 cut(s) 284, 432, 556, 828, 1178, 1186, 1270, 1412
SsiI CCGC 3 cut(s) 22, 32, 355
SspMI CTAG 6 cut(s) 122, 686, 878, 1013, 1152, 1320
SstI GAGCTC 1 cut(s) 1111
StyD4I CCNGG 3 cut(s) 857, 928, 1256
StyI CCWWGG 2 cut(s) 823, 965
TaaI ACNGT 8 cut(s) 180, 230, 266, 370, 441, 602, 922, 1356
TaiI ACGT 2 cut(s) 663, 1424
TaqI TCGA 4 cut(s) 222, 390, 619, 1157
TasI AATT 8 cut(s) 284, 432, 556, 828, 1178, 1186, 1270, 1412
TatI WGTACW 1 cut(s) 266
TauI GCSGC 1 cut(s) 24
TfiI GAWTC 2 cut(s) 496, 721
Tru1I TTAA 5 cut(s) 288, 489, 572, 717, 1307
Tru9I TTAA 5 cut(s) 288, 489, 572, 717, 1307
TscAI CASTG 4 cut(s) 185, 233, 925, 1413
TseFI GTSAC 2 cut(s) 763, 1350
TseI GCWGC 4 cut(s) 51, 422, 701, 1118
Tsp45I GTSAC 2 cut(s) 763, 1350
TspDTI ATGAA 6 cut(s) 524, 642, 756, 798, 878, 1355
TspGWI ACGGA 2 cut(s) 58, 1048
TspRI CASTG 4 cut(s) 185, 233, 925, 1413
Vha464I CTTAAG 1 cut(s) 1306
VpaK11BI GGWCC 1 cut(s) 1223
XagI CCTNNNNNAGG 1 cut(s) 1218
XapI RAATTY 1 cut(s) 556
XbaI TCTAGA 1 cut(s) 1012
XmiI GTMKAC 1 cut(s) 799
XspI CTAG 6 cut(s) 122, 686, 878, 1013, 1152, 1320
ZrmI AGTACT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.