pycom111g00260

Glycosyltransferase family 29 (sialyltransferase)

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
210196 .. 213036
2841 bp
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UTR
Exon/CDS
Intron
pycom111g00260.6

Sequence Viewer

Length: 1428 bp
ATGAGAAGTCACAGACCGGCGTCGAGCAGCAACAATCTCAACCGGCGGCCCACTATTCTCTACCTGATTTGCTCCGTCGCCTTCTTCTCTCTTCTCCTTTTCGCCATCCAATCCTCTTTATTCGCAGCAGAAATTAGATCGATCCACACCCAACATGATGTTCGGGTTTTATCGGAATTTCAGTCTACTGTGAAGCAATGCGTGGCAAACAGAGGGCTTGGTCTGACTGCACACTTTATTGACCATTGCAATCTGACTCTTAAGTTCCCGGAAGGAACTAACAGCACCTGGTATAATGAGCAATTTAAAAAGTTTGAAGCACTCGAATACCCCTACAATGTTTGTGAGGCACTTCTTTTGTGGGAGCAGTACCGGAACATGACGACAGTATTGACAAGGGAGTATCTAGATGTTCGGCCTAAAGGTTGGGAGGAGTATGCACCACAAAGGATTGCACAATTGGGAACTAAGAAATGCTACAATAAGACACTTTGTGAGGAACATCTTAATGTGTTACTACCAGCAAAGCCACCTTTTCATCCTCGGCAATTTCGCACATGTGCAGTTGTTGGAAATTCAGGAGATCTTTTGAAGACGGAGTTTGGAAAAGAGATTGATAGTCATGATGCTGTTATAAGGGACAATGAGGCTCCTGTTAATGAGAAATATGCCAAGTATGTTGGTATGAAGAGGGATTTTCGCCTTGTTGTAAGGGGTGCTGCTCGAAACATGGTTGCCATTCTAAATGGGTCTGCTGATGAGGTACTTATAATCAAAAGTGTTACGCACAAAGACTTTAATGCAATGATCAAGAGTATTACAAATCCAGTTTACCTTTTCCAAGGTATTGTGCTCCGCCGAGGTGCCAAAGGAACCGGAATGAAATCAGTAGAACTAGCACTATCTATGTGCGACATTGTTGACATATATGGTTTCACTGTCGATCCTGGCTATACTGAATGGACACGTTACTTCTCTACACCTAGGAAAGGGCACAATCCACTTCAAGGAAGGGCATACTACCAGCTCCTAGAGTGCCTTGGCGTTGTCCGAATCCATTCTCCCATGAGATCTAAGAGGAAGCAAGACTGGTCAGATGTGCCAAGTCGGGAAATGATAGGCAGAGCTCATGCAGCTGCCTTGAGATTAAAGAGGGGTGAGGCTGGTGACTTGGGACAGTTTGGTAGTTGCAAGGTGTCGGGCAACGTGGACGCTGACAAAGTTGGGCCTGTCTCAGGCTCTCCAGACATGAGTGATAAAAGAAAGTTTTCAAATTACAATAAATGGGAAGTCTTGCCTTTCAAGAGTCTGGGGAAGGAGGCGCAGGACCACTATATTCAAATGGAAGGTGTTTCTCTTTACAAAATGGATGGCAATAAGTTGGATGACCTTGTATGCGTGAGGCATTCCTTAAAATCAGATGTTTAG

Protein Analysis

476

Amino Acids

53.87

Weight (kDa)

9.15

Isoelectric Point (pI)

36.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010708)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 635, 770
AccB1I GGYRCC 1 cut(s) 863
AccI GTMKAC 1 cut(s) 185
AciI CCGC 2 cut(s) 46, 856
AclWI GGATC 2 cut(s) 136, 938
AcsI RAATTY 2 cut(s) 176, 574
AcyI GRCGYC 1 cut(s) 20
AdeI CACNNNGTG 1 cut(s) 494
AfaI GTAC 2 cut(s) 371, 765
AfiI CCNNNNNNNGG 3 cut(s) 989, 1007, 1235
AflII CTTAAG 1 cut(s) 260
AflIII ACRYGT 2 cut(s) 557, 965
AgsI TTSAA 6 cut(s) 317, 592, 1007, 1272, 1303, 1340
AjnI CCWGG 2 cut(s) 287, 946
AjuI GAANNNNNNNTTGG 2 cut(s) 144, 176
AluBI AGCT 3 cut(s) 1027, 1127, 1136
AluI AGCT 3 cut(s) 1027, 1127, 1136
Alw21I GWGCWC 2 cut(s) 855, 1129
Alw26I GTCTC 1 cut(s) 1237
AlwI GGATC 2 cut(s) 136, 938
AlwNI CAGNNNCTG 1 cut(s) 288
AoxI GGCC 3 cut(s) 47, 416, 1226
ApeKI GCWGC 5 cut(s) 27, 125, 719, 1133, 1136
ApoI RAATTY 2 cut(s) 176, 574
Asp700I GAANNNNTTC 2 cut(s) 1057, 1267
AspA2I CCTAGG 1 cut(s) 983
AspLEI GCGC 1 cut(s) 1324
AspS9I GGNCC 3 cut(s) 48, 1226, 1327
AsuC2I CCSGG 1 cut(s) 269
AsuHPI GGTGA 2 cut(s) 1169, 1178
AvaII GGWCC 1 cut(s) 1327
AvrII CCTAGG 1 cut(s) 983
BaeGI GKGCMC 1 cut(s) 996
BanI GGYRCC 1 cut(s) 863
BanII GRGCYC 1 cut(s) 1129
BbsI GAAGAC 1 cut(s) 599
Bbv12I GWGCWC 2 cut(s) 855, 1129
BbvI GCAGC 5 cut(s) 39, 137, 706, 1123, 1145
BccI CCATC 2 cut(s) 113, 1364
BciT130I CCWGG 2 cut(s) 289, 948
BclI TGATCA 1 cut(s) 807
BcnI CCSGG 1 cut(s) 269
BcoDI GTCTC 1 cut(s) 1237
BfaI CTAG 4 cut(s) 407, 896, 984, 1031
BfrI CTTAAG 1 cut(s) 260
BglII AGATCT 2 cut(s) 583, 1070
BisI GCNGC 6 cut(s) 28, 47, 126, 720, 1134, 1137
BlnI CCTAGG 1 cut(s) 983
BlsI GCNGC 6 cut(s) 29, 48, 127, 721, 1135, 1138
Bme1390I CCNGG 3 cut(s) 269, 289, 948
Bme18I GGWCC 1 cut(s) 1327
BmgT120I GGNCC 3 cut(s) 48, 1226, 1327
BmiI GGNNCC 3 cut(s) 651, 865, 874
BmrFI CCNGG 3 cut(s) 269, 289, 948
BmsI GCATC 1 cut(s) 616
BoxI GACNNNNGTC 1 cut(s) 19
BpiI GAAGAC 1 cut(s) 599
BpmI CTGGAG 1 cut(s) 1227
BpuEI CTTGAG 1 cut(s) 1162
BpuMI CCSGG 1 cut(s) 269
Bsa29I ATCGAT 1 cut(s) 140
BsaHI GRCGYC 1 cut(s) 20
BsaJI CCNNGG 5 cut(s) 542, 841, 859, 983, 1039
BsaWI WCCGGW 2 cut(s) 372, 875
Bsc4I CCNNNNNNNGG 3 cut(s) 989, 1007, 1235
Bse118I RCCGGY 2 cut(s) 16, 42
Bse1I ACTGG 2 cut(s) 827, 1094
Bse3DI GCAATG 3 cut(s) 203, 244, 810
BseBI CCWGG 2 cut(s) 289, 948
BseCI ATCGAT 1 cut(s) 140
BseDI CCNNGG 5 cut(s) 542, 841, 859, 983, 1039
BseGI GGATG 4 cut(s) 105, 538, 1375, 1390
BseLI CCNNNNNNNGG 3 cut(s) 989, 1007, 1235
BseMI GCAATG 3 cut(s) 203, 244, 810
BseMII CTCAG 1 cut(s) 1248
BseNI ACTGG 2 cut(s) 827, 1094
BseRI GAGGAG 1 cut(s) 446
BseSI GKGCMC 1 cut(s) 996
BseXI GCAGC 5 cut(s) 39, 137, 706, 1123, 1145
BsgI GTGCAG 2 cut(s) 213, 582
BshFI GGCC 3 cut(s) 49, 418, 1228
BshNI GGYRCC 1 cut(s) 863
BshVI ATCGAT 1 cut(s) 140
BsiHKAI GWGCWC 2 cut(s) 855, 1129
BsiSI CCGG 5 cut(s) 17, 43, 269, 373, 876
BslFI GGGAC 2 cut(s) 653, 1188
BslI CCNNNNNNNGG 3 cut(s) 989, 1007, 1235
BsmAI GTCTC 1 cut(s) 1237
BsmFI GGGAC 2 cut(s) 653, 1188
BsmI GAATGC 1 cut(s) 1405
BsnI GGCC 3 cut(s) 49, 418, 1228
Bsp1286I GDGCHC 3 cut(s) 855, 996, 1129
Bsp143I GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
BspACI CCGC 2 cut(s) 46, 856
BspANI GGCC 3 cut(s) 49, 418, 1228
BspCNI CTCAG 1 cut(s) 1247
BspDI ATCGAT 1 cut(s) 140
BspHI TCATGA 1 cut(s) 622
BspLI GGNNCC 3 cut(s) 651, 865, 874
BspPI GGATC 2 cut(s) 136, 938
BspT107I GGYRCC 1 cut(s) 863
BspTI CTTAAG 1 cut(s) 260
BsrDI GCAATG 3 cut(s) 203, 244, 810
BsrFI RCCGGY 2 cut(s) 16, 42
BsrI ACTGG 2 cut(s) 827, 1094
BssAI RCCGGY 2 cut(s) 16, 42
BssECI CCNNGG 5 cut(s) 542, 841, 859, 983, 1039
BssMI GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 3 cut(s) 841, 983, 1039
Bst2UI CCWGG 2 cut(s) 289, 948
Bst4CI ACNGT 4 cut(s) 190, 388, 940, 1179
Bst6I CTCTTC 2 cut(s) 96, 683
BstACI GRCGYC 1 cut(s) 20
BstAFI CTTAAG 1 cut(s) 260
BstDEI CTNAG 3 cut(s) 468, 1074, 1234
BstENI CCTNNNNNAGG 2 cut(s) 987, 1233
BstF5I GGATG 4 cut(s) 105, 538, 1375, 1390
BstHHI GCGC 1 cut(s) 1324
BstKTI GATC 6 cut(s) 140, 144, 586, 810, 946, 1073
BstMAI GTCTC 1 cut(s) 1237
BstMBI GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
BstMWI GCNNNNNNNGC 1 cut(s) 1133
BstNI CCWGG 2 cut(s) 289, 948
BstNSI RCATGY 1 cut(s) 561
BstPAI GACNNNNGTC 1 cut(s) 19
BstSCI CCNGG 3 cut(s) 267, 287, 946
BstSLI GKGCMC 1 cut(s) 996
BstV1I GCAGC 5 cut(s) 39, 137, 706, 1123, 1145
BstV2I GAAGAC 1 cut(s) 599
BstX2I RGATCY 2 cut(s) 583, 1070
BstYI RGATCY 2 cut(s) 583, 1070
Bsu15I ATCGAT 1 cut(s) 140
BsuRI GGCC 3 cut(s) 49, 418, 1228
BsuTUI ATCGAT 1 cut(s) 140
BtsCI GGATG 4 cut(s) 105, 538, 1375, 1390
BtsIMutI CAGTG 1 cut(s) 936
CaiI CAGNNNCTG 1 cut(s) 288
CciI TCATGA 1 cut(s) 622
CfoI GCGC 1 cut(s) 1324
Cfr10I RCCGGY 2 cut(s) 16, 42
Cfr13I GGNCC 3 cut(s) 48, 1226, 1327
ClaI ATCGAT 1 cut(s) 140
CseI GACGC 2 cut(s) 9, 1220
CsiI ACCWGGT 1 cut(s) 287
Csp6I GTAC 2 cut(s) 370, 764
CviAII CATG 8 cut(s) 155, 379, 558, 623, 730, 1066, 1130, 1249
CviQI GTAC 2 cut(s) 370, 764
DdeI CTNAG 3 cut(s) 468, 1074, 1234
DpnI GATC 6 cut(s) 139, 143, 585, 809, 945, 1072
DpnII GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
DraI TTTAAA 1 cut(s) 307
DraIII CACNNNGTG 1 cut(s) 494
Eam1104I CTCTTC 2 cut(s) 96, 683
EarI CTCTTC 2 cut(s) 96, 683
EciI GGCGGA 1 cut(s) 845
Ecl136II GAGCTC 1 cut(s) 1127
Eco130I CCWWGG 3 cut(s) 841, 983, 1039
Eco24I GRGCYC 1 cut(s) 1129
Eco47I GGWCC 1 cut(s) 1327
Eco53kI GAGCTC 1 cut(s) 1127
EcoICRI GAGCTC 1 cut(s) 1127
EcoNI CCTNNNNNAGG 2 cut(s) 987, 1233
EcoRII CCWGG 2 cut(s) 287, 946
EcoT14I CCWWGG 3 cut(s) 841, 983, 1039
EcoT38I GRGCYC 1 cut(s) 1129
ErhI CCWWGG 3 cut(s) 841, 983, 1039
FaeI CATG 8 cut(s) 158, 382, 561, 626, 733, 1069, 1133, 1252
FaqI GGGAC 2 cut(s) 653, 1188
FatI CATG 8 cut(s) 154, 378, 557, 622, 729, 1065, 1129, 1248
FbaI TGATCA 1 cut(s) 807
FblI GTMKAC 1 cut(s) 185
Fnu4HI GCNGC 6 cut(s) 28, 47, 126, 720, 1134, 1137
FokI GGATG 4 cut(s) 92, 525, 1382, 1397
FriOI GRGCYC 1 cut(s) 1129
Fsp4HI GCNGC 6 cut(s) 28, 47, 126, 720, 1134, 1137
FspBI CTAG 4 cut(s) 407, 896, 984, 1031
GlaI GCGC 1 cut(s) 1323
GluI GCNGC 6 cut(s) 28, 47, 126, 720, 1134, 1137
GsuI CTGGAG 1 cut(s) 1227
HaeIII GGCC 3 cut(s) 49, 418, 1228
HapII CCGG 5 cut(s) 17, 43, 269, 373, 876
HgaI GACGC 2 cut(s) 9, 1220
HhaI GCGC 1 cut(s) 1324
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 8 cut(s) 158, 382, 561, 626, 733, 1069, 1133, 1252
Hin6I GCGC 1 cut(s) 1322
HinP1I GCGC 1 cut(s) 1322
HincII GTYRAC 1 cut(s) 922
HindII GTYRAC 1 cut(s) 922
HinfI GANTC 3 cut(s) 256, 1053, 1306
HpaII CCGG 5 cut(s) 17, 43, 269, 373, 876
HphI GGTGA 2 cut(s) 1169, 1178
Hpy166II GTNNAC 4 cut(s) 186, 832, 922, 1210
Hpy188I TCNGA 6 cut(s) 175, 225, 255, 1052, 1096, 1420
Hpy188III TCNNGA 7 cut(s) 407, 579, 623, 811, 1109, 1244, 1303
Hpy8I GTNNAC 4 cut(s) 186, 832, 922, 1210
Hpy99I CGWCG 2 cut(s) 25, 80
HpyAV CCTTC 5 cut(s) 91, 266, 1005, 1309, 1340
HpyCH4III ACNGT 4 cut(s) 190, 388, 940, 1179
HpyCH4IV ACGT 2 cut(s) 967, 1206
HpyCH4V TGCA 8 cut(s) 230, 249, 440, 455, 563, 803, 1133, 1191
HpyF10VI GCNNNNNNNGC 1 cut(s) 1133
HpyF3I CTNAG 3 cut(s) 468, 1074, 1234
HpySE526I ACGT 2 cut(s) 967, 1206
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 8 cut(s) 158, 382, 561, 626, 733, 1069, 1133, 1252
HspAI GCGC 1 cut(s) 1322
Ksp22I TGATCA 1 cut(s) 807
Kzo9I GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
LmnI GCTCC 5 cut(s) 77, 364, 655, 858, 1032
Lsp1109I GCAGC 5 cut(s) 39, 137, 706, 1123, 1145
LweI GCATC 1 cut(s) 616
MabI ACCWGGT 1 cut(s) 287
MaeI CTAG 4 cut(s) 407, 896, 984, 1031
MaeII ACGT 2 cut(s) 967, 1206
MaeIII GTNAC 5 cut(s) 8, 513, 781, 968, 1166
MalI GATC 6 cut(s) 139, 143, 585, 809, 945, 1072
MboI GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
MboII GAAGA 4 cut(s) 76, 83, 604, 700
MfeI CAATTG 1 cut(s) 458
MflI RGATCY 2 cut(s) 583, 1070
MhlI GDGCHC 3 cut(s) 855, 996, 1129
MluCI AATT 7 cut(s) 132, 176, 302, 458, 548, 574, 1273
MlyI GAGTC 2 cut(s) 250, 1315
MmeI TCCRAC 2 cut(s) 550, 1362
MroXI GAANNNNTTC 2 cut(s) 1057, 1267
MseI TTAA 7 cut(s) 261, 306, 507, 657, 798, 1148, 1412
MslI CAYNNNNRTG 1 cut(s) 507
MspA1I CMGCKG 1 cut(s) 1136
MspCI CTTAAG 1 cut(s) 260
MspI CCGG 5 cut(s) 17, 43, 269, 373, 876
MspR9I CCNGG 3 cut(s) 269, 289, 948
MunI CAATTG 1 cut(s) 458
Mva1269I GAATGC 1 cut(s) 1405
MvaI CCWGG 2 cut(s) 289, 948
MwoI GCNNNNNNNGC 1 cut(s) 1133
NciI CCSGG 1 cut(s) 269
NdeII GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
NlaIII CATG 8 cut(s) 158, 382, 561, 626, 733, 1069, 1133, 1252
NlaIV GGNNCC 3 cut(s) 651, 865, 874
NmeAIII GCCGAG 2 cut(s) 523, 884
NmuCI GTSAC 2 cut(s) 8, 1166
NspI RCATGY 1 cut(s) 561
PagI TCATGA 1 cut(s) 622
PciI ACATGT 1 cut(s) 557
PctI GAATGC 1 cut(s) 1405
PdmI GAANNNNTTC 2 cut(s) 1057, 1267
PfeI GAWTC 1 cut(s) 1053
PfoI TCCNGGA 1 cut(s) 267
PkrI GCNGC 6 cut(s) 29, 48, 127, 721, 1135, 1138
PleI GAGTC 2 cut(s) 250, 1314
PpsI GAGTC 2 cut(s) 250, 1314
PscI ACATGT 1 cut(s) 557
PshAI GACNNNNGTC 1 cut(s) 19
PsiI TTATAA 2 cut(s) 635, 770
Psp124BI GAGCTC 1 cut(s) 1129
Psp6I CCWGG 2 cut(s) 287, 946
PspGI CCWGG 2 cut(s) 287, 946
PspN4I GGNNCC 3 cut(s) 651, 865, 874
PspPI GGNCC 3 cut(s) 48, 1226, 1327
PstNI CAGNNNCTG 1 cut(s) 288
PsuI RGATCY 2 cut(s) 583, 1070
PvuII CAGCTG 1 cut(s) 1136
RsaI GTAC 2 cut(s) 371, 765
RsaNI GTAC 2 cut(s) 370, 764
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 1 cut(s) 1129
SaqAI TTAA 7 cut(s) 261, 306, 507, 657, 798, 1148, 1412
SatI GCNGC 6 cut(s) 28, 47, 126, 720, 1134, 1137
Sau3AI GATC 6 cut(s) 137, 141, 583, 807, 943, 1070
Sau96I GGNCC 3 cut(s) 48, 1226, 1327
SchI GAGTC 2 cut(s) 250, 1315
ScrFI CCNGG 3 cut(s) 269, 289, 948
SduI GDGCHC 3 cut(s) 855, 996, 1129
SexAI ACCWGGT 1 cut(s) 287
SfaNI GCATC 1 cut(s) 616
SinI GGWCC 1 cut(s) 1327
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 2 cut(s) 260, 1141
SmoI CTYRAG 2 cut(s) 260, 1141
Sse9I AATT 7 cut(s) 132, 176, 302, 458, 548, 574, 1273
SsiI CCGC 2 cut(s) 46, 856
SspMI CTAG 4 cut(s) 407, 896, 984, 1031
SstI GAGCTC 1 cut(s) 1129
StyD4I CCNGG 3 cut(s) 267, 287, 946
StyI CCWWGG 3 cut(s) 841, 983, 1039
TaaI ACNGT 4 cut(s) 190, 388, 940, 1179
TaiI ACGT 2 cut(s) 970, 1209
TaqI TCGA 5 cut(s) 23, 140, 324, 724, 942
TasI AATT 7 cut(s) 132, 176, 302, 458, 548, 574, 1273
TauI GCSGC 1 cut(s) 49
TfiI GAWTC 1 cut(s) 1053
Tru1I TTAA 7 cut(s) 261, 306, 507, 657, 798, 1148, 1412
Tru9I TTAA 7 cut(s) 261, 306, 507, 657, 798, 1148, 1412
TscAI CASTG 1 cut(s) 943
TseFI GTSAC 2 cut(s) 8, 1166
TseI GCWGC 5 cut(s) 27, 125, 719, 1133, 1136
Tsp45I GTSAC 2 cut(s) 8, 1166
TspDTI ATGAA 3 cut(s) 527, 701, 896
TspGWI ACGGA 2 cut(s) 64, 611
TspRI CASTG 1 cut(s) 943
Vha464I CTTAAG 1 cut(s) 260
VpaK11BI GGWCC 1 cut(s) 1327
XagI CCTNNNNNAGG 2 cut(s) 987, 1233
XapI RAATTY 2 cut(s) 176, 574
XbaI TCTAGA 1 cut(s) 406
XceI RCATGY 1 cut(s) 561
XmaJI CCTAGG 1 cut(s) 983
XmiI GTMKAC 1 cut(s) 185
XmnI GAANNNNTTC 2 cut(s) 1057, 1267
XspI CTAG 4 cut(s) 407, 896, 984, 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.