Rh2BG684400

Glycosyltransferase family 29 (sialyltransferase)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
89227497 .. 89230447
2951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG684400.1

Sequence Viewer

Length: 1461 bp
ATGAGAGGTCAGAAGGGAGGGTTGAATAGCAGCAGCAGCAGCAGCAGCAGGCGACCCAGCACCGTTCTGTACCTGGTTTGCGCTGCCGCATTCTTCTCTCTCCTCGTCTTCGCCATCCAGACCTCTTTCTTCGCTCAATCTGATTCCTCTTCCTCTTCAGTTAAGTTAGATCTCAATACTCAGCAAGATATTCGCACTTTATCCCAATTTCAGTCTACTGTGCAGCAATGCGTGGCAAACAGAGGGCTTGGTCTTACTGCAGATATTGTTGACCACTGCAATCTGATTCTCAAGTATCCACAAGGAACTAACAGCACCTGGTACAATGCGCAGTTTAAAGTTTTTGAACCATTACAGTACAAGTTCAATGTTTGTGAGGCACTCTTATTGTGGGAGCAGTACCGTAACATGACTACAGTATTGACAAGGGAGTATCTAGATGTTCGCCCTAAAGGATGGGAAGACTACGCACCACAAAGGATAGCGCAATTGGGAACCAAAAATTGCTACAATAAGACAATTTGTGAGGAACACCTTAATTTGATACTGCCGGCAAAGCCACCTTTCCATCCTCGCCAATTCCGTACATGTGCAGTTGTTGGAAATTCAGGAGATCTTTTGAAAACAGAGTTTGGAAAAGAAATTGATGCCCATGATGCTGTAATAAGAGACAATGAGGCTCCTGTTAATGAGAAATATGCCAAGTATGTTGGTCTCAAGAGGGATTTTCGCCTTGTTGTGAGGGGTGCTGCTCGTAACATGGTTGCCATTCTAAATGGGTCTGATGACGAGGTACTCATAATCAAAAGTGTTACACATAAAGACTTCAATGCAATGATCAAGAGTATTCCAAATCCAGTGTATCTTTTTCAAGGTATTGTGCTCCGCAGAGGTGCCAAAGGAACTGGAATGAAATCCATAGAACTAGCACTATCTATGTGCGACATTGTTGACATGTATGGTTTCACTGTTGATCCTGGCTATACTGAATGGACACGTTACTTCTCTACACCTAGGAAAGGGCACAATCCACTTCAAGGAAGGGCATACTACCAGCTCCTAGAGTGCCTTGGTGTCATCAGAATTCATTCTCCAATGAGATCTAAGAGGAAGCAAGGCTGGTCAGATATACCTAGTCGAGAAATGATAGGCAGAGCTCATGCAGCAGCCTTGCGTTTAAAGAGGGGTCAAGATGGTGATTTGGGACAGTTTGGTAGTTGTAAGGTGTCGGGTAATGTGGACCCTGACAAAATTGGGCCTGTCTCAGGATCTGCAGACATGAGTGATGTAAGAAAGTCTTCAAATTACAGTAAGTGGGAAGTCTTGCCCTTCGAGAGTCTGAGGAAGGAAGCGCAGGACCACTATAATCAAATGGAAGGTGTGTCTCTATACAAAATGGATGGCAACAAGTTAGATGATCTAGTATGTGTGAGGCATACCTCAAAATCAGCTGTCTACTGA

Protein Analysis

486

Amino Acids

54.61

Weight (kDa)

9.11

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_29 PF00777 173 - 280 4.7e-19 Glycosyltransferase family 29 (sialyltransferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010708)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 330
AccB1I GGYRCC 1 cut(s) 893
AccI GTMKAC 2 cut(s) 215, 1455
AciI CCGC 2 cut(s) 87, 886
AclWI GGATC 2 cut(s) 968, 1276
AcsI RAATTY 2 cut(s) 604, 1083
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 6 cut(s) 71, 323, 359, 401, 586, 795
AfiI CCNNNNNNNGG 3 cut(s) 1019, 1037, 1265
AflIII ACRYGT 3 cut(s) 587, 954, 995
AgsI TTSAA 8 cut(s) 25, 347, 367, 622, 829, 872, 1037, 1302
AjnI CCWGG 3 cut(s) 72, 317, 976
AluBI AGCT 3 cut(s) 1057, 1157, 1451
AluI AGCT 3 cut(s) 1057, 1157, 1451
Alw21I GWGCWC 2 cut(s) 885, 1159
Alw26I GTCTC 4 cut(s) 663, 719, 1267, 1389
AlwI GGATC 2 cut(s) 968, 1276
AlwNI CAGNNNCTG 2 cut(s) 318, 1271
AoxI GGCC 1 cut(s) 1256
ApoI RAATTY 2 cut(s) 604, 1083
Asp700I GAANNNNTTC 2 cut(s) 1087, 1297
AspA2I CCTAGG 1 cut(s) 1013
AspLEI GCGC 4 cut(s) 83, 331, 487, 1354
AspS9I GGNCC 3 cut(s) 1240, 1256, 1357
AsuHPI GGTGA 1 cut(s) 1208
AvaII GGWCC 2 cut(s) 1240, 1357
AvrII CCTAGG 1 cut(s) 1013
BaeGI GKGCMC 1 cut(s) 1026
BanI GGYRCC 1 cut(s) 893
BanII GRGCYC 1 cut(s) 1159
BbsI GAAGAC 3 cut(s) 100, 468, 1290
Bbv12I GWGCWC 2 cut(s) 885, 1159
BccI CCATC 5 cut(s) 122, 450, 576, 1187, 1394
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 3 cut(s) 74, 319, 978
BciVI GTATCC 1 cut(s) 306
BclI TGATCA 1 cut(s) 837
BcoDI GTCTC 4 cut(s) 663, 719, 1267, 1389
BfaI CTAG 6 cut(s) 437, 926, 1014, 1061, 1134, 1421
BfmI CTRYAG 3 cut(s) 258, 414, 1272
BfuI GTATCC 1 cut(s) 306
BglII AGATCT 3 cut(s) 169, 613, 1100
BlnI CCTAGG 1 cut(s) 1013
Bme1390I CCNGG 3 cut(s) 74, 319, 978
Bme18I GGWCC 2 cut(s) 1240, 1357
BmgT120I GGNCC 3 cut(s) 1240, 1256, 1357
BmiI GGNNCC 4 cut(s) 496, 681, 895, 1242
BmrFI CCNGG 3 cut(s) 74, 319, 978
BmsI GCATC 2 cut(s) 637, 646
BpiI GAAGAC 3 cut(s) 100, 468, 1290
BpuEI CTTGAG 2 cut(s) 275, 701
BsaI GGTCTC 1 cut(s) 719
BsaJI CCNNGG 2 cut(s) 1013, 1069
Bsc4I CCNNNNNNNGG 3 cut(s) 1019, 1037, 1265
Bse118I RCCGGY 1 cut(s) 550
Bse1I ACTGG 2 cut(s) 857, 910
Bse3DI GCAATG 2 cut(s) 233, 840
BseBI CCWGG 3 cut(s) 74, 319, 978
BseDI CCNNGG 2 cut(s) 1013, 1069
BseGI GGATG 4 cut(s) 114, 461, 568, 1405
BseLI CCNNNNNNNGG 3 cut(s) 1019, 1037, 1265
BseMI GCAATG 2 cut(s) 233, 840
BseMII CTCAG 3 cut(s) 194, 1278, 1331
BseNI ACTGG 2 cut(s) 857, 910
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 1 cut(s) 1026
BseYI CCCAGC 1 cut(s) 56
BsgI GTGCAG 2 cut(s) 242, 612
BshFI GGCC 1 cut(s) 1258
BshNI GGYRCC 1 cut(s) 893
BsiHKAI GWGCWC 2 cut(s) 885, 1159
BsiSI CCGG 1 cut(s) 551
BslFI GGGAC 1 cut(s) 1218
BslI CCNNNNNNNGG 3 cut(s) 1019, 1037, 1265
BsmAI GTCTC 4 cut(s) 663, 719, 1267, 1389
BsmFI GGGAC 1 cut(s) 1218
BsmI GAATGC 1 cut(s) 89
BsnI GGCC 1 cut(s) 1258
Bso31I GGTCTC 1 cut(s) 719
Bsp1286I GDGCHC 3 cut(s) 885, 1026, 1159
Bsp143I GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
BspACI CCGC 2 cut(s) 87, 886
BspANI GGCC 1 cut(s) 1258
BspCNI CTCAG 3 cut(s) 193, 1277, 1332
BspLI GGNNCC 4 cut(s) 496, 681, 895, 1242
BspMAI CTGCAG 2 cut(s) 262, 1276
BspPI GGATC 2 cut(s) 968, 1276
BspT107I GGYRCC 1 cut(s) 893
BspTNI GGTCTC 1 cut(s) 719
BsrDI GCAATG 2 cut(s) 233, 840
BsrFI RCCGGY 1 cut(s) 550
BsrI ACTGG 2 cut(s) 857, 910
BssAI RCCGGY 1 cut(s) 550
BssECI CCNNGG 2 cut(s) 1013, 1069
BssMI GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
BssT1I CCWWGG 2 cut(s) 1013, 1069
Bst2UI CCWGG 3 cut(s) 74, 319, 978
Bst4CI ACNGT 8 cut(s) 64, 220, 357, 404, 418, 970, 1209, 1310
Bst6I CTCTTC 2 cut(s) 154, 160
BstC8I GCNNGC 2 cut(s) 50, 552
BstDEI CTNAG 4 cut(s) 180, 1104, 1264, 1340
BstENI CCTNNNNNAGG 2 cut(s) 1017, 1263
BstF5I GGATG 4 cut(s) 114, 461, 568, 1405
BstHHI GCGC 4 cut(s) 83, 331, 487, 1354
BstKTI GATC 7 cut(s) 172, 616, 840, 976, 1103, 1271, 1420
BstMAI GTCTC 4 cut(s) 663, 719, 1267, 1389
BstMBI GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
BstMWI GCNNNNNNNGC 7 cut(s) 36, 39, 42, 45, 556, 656, 1163
BstNI CCWGG 3 cut(s) 74, 319, 978
BstNSI RCATGY 2 cut(s) 591, 958
BstSCI CCNGG 3 cut(s) 72, 317, 976
BstSFI CTRYAG 3 cut(s) 258, 414, 1272
BstSLI GKGCMC 1 cut(s) 1026
BstV2I GAAGAC 3 cut(s) 100, 468, 1290
BstX2I RGATCY 4 cut(s) 169, 613, 1100, 1268
BstYI RGATCY 4 cut(s) 169, 613, 1100, 1268
BsuI GTATCC 1 cut(s) 306
BsuRI GGCC 1 cut(s) 1258
BtsCI GGATG 4 cut(s) 114, 461, 568, 1405
BtsI GCAGTG 1 cut(s) 274
BtsIMutI CAGTG 3 cut(s) 274, 864, 966
Cac8I GCNNGC 2 cut(s) 50, 552
CaiI CAGNNNCTG 2 cut(s) 318, 1271
CfoI GCGC 4 cut(s) 83, 331, 487, 1354
Cfr10I RCCGGY 1 cut(s) 550
Cfr13I GGNCC 3 cut(s) 1240, 1256, 1357
CsiI ACCWGGT 2 cut(s) 72, 317
Csp6I GTAC 6 cut(s) 70, 322, 358, 400, 585, 794
CviAII CATG 7 cut(s) 409, 588, 653, 760, 955, 1160, 1279
CviQI GTAC 6 cut(s) 70, 322, 358, 400, 585, 794
DdeI CTNAG 4 cut(s) 180, 1104, 1264, 1340
DpnI GATC 7 cut(s) 171, 615, 839, 975, 1102, 1270, 1419
DpnII GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
DraI TTTAAA 2 cut(s) 337, 1179
Eam1104I CTCTTC 2 cut(s) 154, 160
EarI CTCTTC 2 cut(s) 154, 160
Ecl136II GAGCTC 1 cut(s) 1157
Eco130I CCWWGG 2 cut(s) 1013, 1069
Eco24I GRGCYC 1 cut(s) 1159
Eco31I GGTCTC 1 cut(s) 719
Eco47I GGWCC 2 cut(s) 1240, 1357
Eco53kI GAGCTC 1 cut(s) 1157
Eco57I CTGAAG 1 cut(s) 141
EcoICRI GAGCTC 1 cut(s) 1157
EcoNI CCTNNNNNAGG 2 cut(s) 1017, 1263
EcoRI GAATTC 1 cut(s) 1083
EcoRII CCWGG 3 cut(s) 72, 317, 976
EcoT14I CCWWGG 2 cut(s) 1013, 1069
EcoT38I GRGCYC 1 cut(s) 1159
ErhI CCWWGG 2 cut(s) 1013, 1069
FaeI CATG 7 cut(s) 412, 591, 656, 763, 958, 1163, 1282
FalI AAGNNNNNCTT 2 cut(s) 1282, 1314
FaqI GGGAC 1 cut(s) 1218
FatI CATG 7 cut(s) 408, 587, 652, 759, 954, 1159, 1278
FbaI TGATCA 1 cut(s) 837
FblI GTMKAC 2 cut(s) 215, 1455
FokI GGATG 4 cut(s) 101, 468, 555, 1412
FriOI GRGCYC 1 cut(s) 1159
FspBI CTAG 6 cut(s) 437, 926, 1014, 1061, 1134, 1421
FspI TGCGCA 1 cut(s) 330
GlaI GCGC 4 cut(s) 82, 330, 486, 1353
GsaI CCCAGC 1 cut(s) 60
HaeIII GGCC 1 cut(s) 1258
HapII CCGG 1 cut(s) 551
HhaI GCGC 4 cut(s) 83, 331, 487, 1354
Hin1II CATG 7 cut(s) 412, 591, 656, 763, 958, 1163, 1282
Hin6I GCGC 4 cut(s) 81, 329, 485, 1352
HinP1I GCGC 4 cut(s) 81, 329, 485, 1352
HincII GTYRAC 2 cut(s) 271, 952
HindII GTYRAC 2 cut(s) 271, 952
HinfI GANTC 3 cut(s) 143, 286, 1336
HpaII CCGG 1 cut(s) 551
HphI GGTGA 1 cut(s) 1208
Hpy166II GTNNAC 5 cut(s) 216, 271, 952, 1240, 1456
Hpy188I TCNGA 7 cut(s) 12, 142, 285, 784, 1082, 1126, 1341
Hpy188III TCNNGA 9 cut(s) 118, 437, 609, 718, 841, 1139, 1190, 1266, 1333
Hpy8I GTNNAC 5 cut(s) 216, 271, 952, 1240, 1456
HpyAV CCTTC 5 cut(s) 7, 1035, 1339, 1339, 1370
HpyCH4III ACNGT 8 cut(s) 64, 220, 357, 404, 418, 970, 1209, 1310
HpyCH4IV ACGT 1 cut(s) 997
HpyCH4V TGCA 7 cut(s) 223, 260, 279, 593, 833, 1163, 1274
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 39, 42, 45, 556, 656, 1163
HpyF3I CTNAG 4 cut(s) 180, 1104, 1264, 1340
HpySE526I ACGT 1 cut(s) 997
Hsp92II CATG 7 cut(s) 412, 591, 656, 763, 958, 1163, 1282
HspAI GCGC 4 cut(s) 81, 329, 485, 1352
KroI GCCGGC 1 cut(s) 550
KroNI GCCGGC 1 cut(s) 552
Ksp22I TGATCA 1 cut(s) 837
Kzo9I GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
LmnI GCTCC 4 cut(s) 394, 685, 888, 1062
LweI GCATC 2 cut(s) 637, 646
MabI ACCWGGT 2 cut(s) 72, 317
MaeI CTAG 6 cut(s) 437, 926, 1014, 1061, 1134, 1421
MaeII ACGT 1 cut(s) 997
MaeIII GTNAC 4 cut(s) 404, 755, 811, 998
MalI GATC 7 cut(s) 171, 615, 839, 975, 1102, 1270, 1419
MboI GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
MboII GAAGA 7 cut(s) 85, 100, 121, 141, 147, 473, 1290
MfeI CAATTG 1 cut(s) 488
MflI RGATCY 4 cut(s) 169, 613, 1100, 1268
MhlI GDGCHC 3 cut(s) 885, 1026, 1159
MlyI GAGTC 1 cut(s) 1345
MmeI TCCRAC 1 cut(s) 580
MroNI GCCGGC 1 cut(s) 550
MroXI GAANNNNTTC 2 cut(s) 1087, 1297
MseI TTAA 5 cut(s) 162, 336, 537, 687, 1178
MspA1I CMGCKG 1 cut(s) 1451
MspI CCGG 1 cut(s) 551
MspR9I CCNGG 3 cut(s) 74, 319, 978
MunI CAATTG 1 cut(s) 488
Mva1269I GAATGC 1 cut(s) 89
MvaI CCWGG 3 cut(s) 74, 319, 978
MwoI GCNNNNNNNGC 7 cut(s) 36, 39, 42, 45, 556, 656, 1163
NaeI GCCGGC 1 cut(s) 552
NdeII GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
NgoMIV GCCGGC 1 cut(s) 550
NlaIII CATG 7 cut(s) 412, 591, 656, 763, 958, 1163, 1282
NlaIV GGNNCC 4 cut(s) 496, 681, 895, 1242
NsbI TGCGCA 1 cut(s) 330
NspI RCATGY 2 cut(s) 591, 958
PciI ACATGT 2 cut(s) 587, 954
PcsI WCGNNNNNNNCGW 1 cut(s) 580
PctI GAATGC 1 cut(s) 89
PdiI GCCGGC 1 cut(s) 552
PdmI GAANNNNTTC 2 cut(s) 1087, 1297
PfeI GAWTC 2 cut(s) 143, 286
PleI GAGTC 1 cut(s) 1344
PpsI GAGTC 1 cut(s) 1344
PscI ACATGT 2 cut(s) 587, 954
Psp124BI GAGCTC 1 cut(s) 1159
Psp6I CCWGG 3 cut(s) 72, 317, 976
PspFI CCCAGC 1 cut(s) 56
PspGI CCWGG 3 cut(s) 72, 317, 976
PspN4I GGNNCC 4 cut(s) 496, 681, 895, 1242
PspPI GGNCC 3 cut(s) 1240, 1256, 1357
PstI CTGCAG 2 cut(s) 262, 1276
PstNI CAGNNNCTG 2 cut(s) 318, 1271
PsuI RGATCY 4 cut(s) 169, 613, 1100, 1268
PvuII CAGCTG 1 cut(s) 1451
RsaI GTAC 6 cut(s) 71, 323, 359, 401, 586, 795
RsaNI GTAC 6 cut(s) 70, 322, 358, 400, 585, 794
SacI GAGCTC 1 cut(s) 1159
SaqAI TTAA 5 cut(s) 162, 336, 537, 687, 1178
Sau3AI GATC 7 cut(s) 169, 613, 837, 973, 1100, 1268, 1417
Sau96I GGNCC 3 cut(s) 1240, 1256, 1357
SchI GAGTC 1 cut(s) 1345
ScrFI CCNGG 3 cut(s) 74, 319, 978
SduI GDGCHC 3 cut(s) 885, 1026, 1159
SexAI ACCWGGT 2 cut(s) 72, 317
SfaNI GCATC 2 cut(s) 637, 646
SfcI CTRYAG 3 cut(s) 258, 414, 1272
SinI GGWCC 2 cut(s) 1240, 1357
SmlI CTYRAG 2 cut(s) 290, 716
SmoI CTYRAG 2 cut(s) 290, 716
SsiI CCGC 2 cut(s) 87, 886
SspMI CTAG 6 cut(s) 437, 926, 1014, 1061, 1134, 1421
SstI GAGCTC 1 cut(s) 1159
StyD4I CCNGG 3 cut(s) 72, 317, 976
StyI CCWWGG 2 cut(s) 1013, 1069
TaaI ACNGT 8 cut(s) 64, 220, 357, 404, 418, 970, 1209, 1310
TaiI ACGT 1 cut(s) 1000
TaqI TCGA 2 cut(s) 1138, 1332
TatI WGTACW 1 cut(s) 357
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 2 cut(s) 143, 286
Tru1I TTAA 5 cut(s) 162, 336, 537, 687, 1178
Tru9I TTAA 5 cut(s) 162, 336, 537, 687, 1178
TscAI CASTG 3 cut(s) 281, 864, 973
TspDTI ATGAA 2 cut(s) 926, 1076
TspGWI ACGGA 1 cut(s) 572
TspRI CASTG 3 cut(s) 281, 864, 973
VpaK11BI GGWCC 2 cut(s) 1240, 1357
XagI CCTNNNNNAGG 2 cut(s) 1017, 1263
XapI RAATTY 2 cut(s) 604, 1083
XbaI TCTAGA 1 cut(s) 436
XceI RCATGY 2 cut(s) 591, 958
XmaJI CCTAGG 1 cut(s) 1013
XmiI GTMKAC 2 cut(s) 215, 1455
XmnI GAANNNNTTC 2 cut(s) 1087, 1297
XspI CTAG 6 cut(s) 437, 926, 1014, 1061, 1134, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.