Rmu_sc0011904.1_g000014

Glycosyltransferase family 29 (sialyltransferase)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011904.1
Physical Location & Seq
Forward (+)
52507 .. 55713
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011904.1_g000014.1.cds

Sequence Viewer

Length: 1542 bp
atgagaggtcagaagggagggttgaatggcagcagcagcagcaggcgacccagcaccgttctgtacctggtttgcgctgccgcattcttctctctcctcgtcttcgccatccagacctctttcttcgctcaatctgattcctcttcctcttcctcttcctcttcctcttcagttaagttagatctcactactgagcaagatattcgcactttatcccaatttcagtctactgtgcagcaatgcgtggcaaacagagggcttggtcttactgcagatattgttgaccactgcaatctgattctcaagtatccacaaggaactaacagcacctggtacaacgcgcagtttaaagtttttgaaccattacagtacaagttcaatgtttgtgaggcactcttattgtgggagcagtaccgtaacatgactacagtattgacaagggagtatctagatgttcgccctaaaggatgggaagactacgcaccgcaaaggatagcgcaattgggaaccaaaaattgctacaataagacaatttgtgaggaacaccttaatttgatactgccggcaaagccacctttccatcctcgccaattccgtacatgtgcagttgttggaaattcaggagatcttttgaaaacagagtttggaaaagaaattgatgcccatgatgctgtaataagagacaatgaggctcctgttaatgagaaatatgccaagtatgttggtctcaagagggattttcgccttgttgtgaggggtgctgctcgtaacatgaaatatgccaagtatgttggcctcaagagggattttcgccttgttgtgaggggtgctgctcgtaacatggttgccattctaaatgggtctgatgatgaggtactcataatcaagagtgttacacataaagacttcaatgcaatgatcaagagtattccaaatccagtgtatctttttcaaggtattgtgctccgcagaggtgccaaaggaactggaatgaaatccatagaactagcactatctatgtgcgacattgttgacatgtatggtttcactgttgatcctggctatactgaatggacacgttacttctctacacctaggaaagggcacaatccacttcaaggaagggcatactaccagctcctagagtgccttggtgtcatcagaattcattctccaatgagatctaagaggaagcaaggctggtcagatatacctagtcgagaaatgataggcagagctcatgcagcagccttgcgtttaaagaggggtcaagatggtgatttgggacagtttggtagttgtaaggtgtcgggtaatgtggacccagacaaaattgggcctgtctcaggatctgcagacatgagtgatgtaagaaagtcttcaaattacagtaagtgggaagtcttgtccttcgagagtctgaggaaggaagcgcaggaccactataatcaaatggaaggtgtgtctctatacaaaatggatggcaacaagttagatgatctagtatgtgtgaggcattcctcaaaatcagctgtctactga

Protein Analysis

513

Amino Acids

57.59

Weight (kDa)

9.31

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010708)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 974
AccI GTMKAC 2 cut(s) 227, 1536
AccII CGCG 1 cut(s) 341
AciI CCGC 3 cut(s) 81, 485, 967
AclWI GGATC 2 cut(s) 1049, 1357
AcsI RAATTY 2 cut(s) 616, 1164
AcuI CTGAAG 1 cut(s) 153
AfaI GTAC 6 cut(s) 65, 335, 371, 413, 598, 876
AfiI CCNNNNNNNGG 4 cut(s) 802, 1100, 1118, 1346
AflIII ACRYGT 3 cut(s) 599, 1035, 1076
AgsI TTSAA 8 cut(s) 25, 359, 379, 634, 910, 953, 1118, 1383
AjnI CCWGG 3 cut(s) 66, 329, 1057
AluBI AGCT 3 cut(s) 1138, 1238, 1532
AluI AGCT 3 cut(s) 1138, 1238, 1532
Alw21I GWGCWC 2 cut(s) 966, 1240
Alw26I GTCTC 4 cut(s) 675, 731, 1348, 1470
AlwI GGATC 2 cut(s) 1049, 1357
AlwNI CAGNNNCTG 2 cut(s) 330, 1352
AoxI GGCC 2 cut(s) 793, 1337
ApoI RAATTY 2 cut(s) 616, 1164
Asp700I GAANNNNTTC 2 cut(s) 1168, 1378
AspA2I CCTAGG 1 cut(s) 1094
AspLEI GCGC 4 cut(s) 77, 343, 499, 1435
AspS9I GGNCC 3 cut(s) 1321, 1337, 1438
AsuHPI GGTGA 1 cut(s) 1289
AvaII GGWCC 2 cut(s) 1321, 1438
AvrII CCTAGG 1 cut(s) 1094
BaeGI GKGCMC 1 cut(s) 1107
BanI GGYRCC 1 cut(s) 974
BanII GRGCYC 1 cut(s) 1240
BbsI GAAGAC 3 cut(s) 94, 480, 1371
Bbv12I GWGCWC 2 cut(s) 966, 1240
BccI CCATC 5 cut(s) 116, 462, 588, 1268, 1475
BcgI CGANNNNNNTGC 2 cut(s) 185, 219
BciT130I CCWGG 3 cut(s) 68, 331, 1059
BciVI GTATCC 1 cut(s) 318
BclI TGATCA 1 cut(s) 918
BcoDI GTCTC 4 cut(s) 675, 731, 1348, 1470
BfaI CTAG 6 cut(s) 449, 1007, 1095, 1142, 1215, 1502
BfmI CTRYAG 3 cut(s) 270, 426, 1353
BfuI GTATCC 1 cut(s) 318
BglII AGATCT 3 cut(s) 181, 625, 1181
BlnI CCTAGG 1 cut(s) 1094
Bme1390I CCNGG 3 cut(s) 68, 331, 1059
Bme18I GGWCC 2 cut(s) 1321, 1438
BmgT120I GGNCC 3 cut(s) 1321, 1337, 1438
BmiI GGNNCC 4 cut(s) 508, 693, 976, 1323
BmrFI CCNGG 3 cut(s) 68, 331, 1059
BmsI GCATC 2 cut(s) 649, 658
BpiI GAAGAC 3 cut(s) 94, 480, 1371
BpuEI CTTGAG 3 cut(s) 287, 713, 782
BsaI GGTCTC 1 cut(s) 731
BsaJI CCNNGG 2 cut(s) 1094, 1150
Bsc4I CCNNNNNNNGG 4 cut(s) 802, 1100, 1118, 1346
Bse118I RCCGGY 1 cut(s) 562
Bse1I ACTGG 2 cut(s) 938, 991
Bse3DI GCAATG 2 cut(s) 245, 921
BseBI CCWGG 3 cut(s) 68, 331, 1059
BseDI CCNNGG 2 cut(s) 1094, 1150
BseGI GGATG 4 cut(s) 108, 473, 580, 1486
BseLI CCNNNNNNNGG 4 cut(s) 802, 1100, 1118, 1346
BseMI GCAATG 2 cut(s) 245, 921
BseMII CTCAG 3 cut(s) 183, 1359, 1412
BseNI ACTGG 2 cut(s) 938, 991
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 1 cut(s) 1107
BseYI CCCAGC 1 cut(s) 50
BsgI GTGCAG 2 cut(s) 254, 624
Bsh1236I CGCG 1 cut(s) 341
BshFI GGCC 2 cut(s) 795, 1339
BshNI GGYRCC 1 cut(s) 974
BsiHKAI GWGCWC 2 cut(s) 966, 1240
BsiSI CCGG 1 cut(s) 563
BslFI GGGAC 1 cut(s) 1299
BslI CCNNNNNNNGG 4 cut(s) 802, 1100, 1118, 1346
BsmAI GTCTC 4 cut(s) 675, 731, 1348, 1470
BsmFI GGGAC 1 cut(s) 1299
BsmI GAATGC 2 cut(s) 83, 1516
BsnI GGCC 2 cut(s) 795, 1339
Bso31I GGTCTC 1 cut(s) 731
Bsp1286I GDGCHC 3 cut(s) 966, 1107, 1240
Bsp143I GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
BspACI CCGC 3 cut(s) 81, 485, 967
BspANI GGCC 2 cut(s) 795, 1339
BspCNI CTCAG 3 cut(s) 184, 1358, 1413
BspFNI CGCG 1 cut(s) 341
BspLI GGNNCC 4 cut(s) 508, 693, 976, 1323
BspMAI CTGCAG 2 cut(s) 274, 1357
BspPI GGATC 2 cut(s) 1049, 1357
BspT107I GGYRCC 1 cut(s) 974
BspTNI GGTCTC 1 cut(s) 731
BsrDI GCAATG 2 cut(s) 245, 921
BsrFI RCCGGY 1 cut(s) 562
BsrI ACTGG 2 cut(s) 938, 991
BssAI RCCGGY 1 cut(s) 562
BssECI CCNNGG 2 cut(s) 1094, 1150
BssMI GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
BssT1I CCWWGG 2 cut(s) 1094, 1150
Bst2UI CCWGG 3 cut(s) 68, 331, 1059
Bst4CI ACNGT 8 cut(s) 58, 232, 369, 416, 430, 1051, 1290, 1391
Bst6I CTCTTC 5 cut(s) 148, 154, 160, 166, 172
BstC8I GCNNGC 2 cut(s) 44, 564
BstDEI CTNAG 4 cut(s) 192, 1185, 1345, 1421
BstENI CCTNNNNNAGG 2 cut(s) 1098, 1344
BstF5I GGATG 4 cut(s) 108, 473, 580, 1486
BstFNI CGCG 1 cut(s) 341
BstHHI GCGC 4 cut(s) 77, 343, 499, 1435
BstKTI GATC 7 cut(s) 184, 628, 921, 1057, 1184, 1352, 1501
BstMAI GTCTC 4 cut(s) 675, 731, 1348, 1470
BstMBI GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
BstMWI GCNNNNNNNGC 5 cut(s) 36, 39, 568, 668, 1244
BstNI CCWGG 3 cut(s) 68, 331, 1059
BstNSI RCATGY 2 cut(s) 603, 1039
BstSCI CCNGG 3 cut(s) 66, 329, 1057
BstSFI CTRYAG 3 cut(s) 270, 426, 1353
BstSLI GKGCMC 1 cut(s) 1107
BstUI CGCG 1 cut(s) 341
BstV2I GAAGAC 3 cut(s) 94, 480, 1371
BstX2I RGATCY 4 cut(s) 181, 625, 1181, 1349
BstYI RGATCY 4 cut(s) 181, 625, 1181, 1349
BsuI GTATCC 1 cut(s) 318
BsuRI GGCC 2 cut(s) 795, 1339
BtsCI GGATG 4 cut(s) 108, 473, 580, 1486
BtsI GCAGTG 1 cut(s) 286
BtsIMutI CAGTG 3 cut(s) 286, 945, 1047
Cac8I GCNNGC 2 cut(s) 44, 564
CaiI CAGNNNCTG 2 cut(s) 330, 1352
CfoI GCGC 4 cut(s) 77, 343, 499, 1435
Cfr10I RCCGGY 1 cut(s) 562
Cfr13I GGNCC 3 cut(s) 1321, 1337, 1438
CsiI ACCWGGT 2 cut(s) 66, 329
Csp6I GTAC 6 cut(s) 64, 334, 370, 412, 597, 875
CviAII CATG 8 cut(s) 421, 600, 665, 772, 841, 1036, 1241, 1360
CviQI GTAC 6 cut(s) 64, 334, 370, 412, 597, 875
DdeI CTNAG 4 cut(s) 192, 1185, 1345, 1421
DpnI GATC 7 cut(s) 183, 627, 920, 1056, 1183, 1351, 1500
DpnII GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
DraI TTTAAA 2 cut(s) 349, 1260
Eam1104I CTCTTC 5 cut(s) 148, 154, 160, 166, 172
EarI CTCTTC 5 cut(s) 148, 154, 160, 166, 172
Ecl136II GAGCTC 1 cut(s) 1238
Eco130I CCWWGG 2 cut(s) 1094, 1150
Eco24I GRGCYC 1 cut(s) 1240
Eco31I GGTCTC 1 cut(s) 731
Eco47I GGWCC 2 cut(s) 1321, 1438
Eco53kI GAGCTC 1 cut(s) 1238
Eco57I CTGAAG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 1238
EcoNI CCTNNNNNAGG 2 cut(s) 1098, 1344
EcoRI GAATTC 1 cut(s) 1164
EcoRII CCWGG 3 cut(s) 66, 329, 1057
EcoT14I CCWWGG 2 cut(s) 1094, 1150
EcoT38I GRGCYC 1 cut(s) 1240
ErhI CCWWGG 2 cut(s) 1094, 1150
FaeI CATG 8 cut(s) 424, 603, 668, 775, 844, 1039, 1244, 1363
FalI AAGNNNNNCTT 2 cut(s) 1363, 1395
FaqI GGGAC 1 cut(s) 1299
FatI CATG 8 cut(s) 420, 599, 664, 771, 840, 1035, 1240, 1359
FbaI TGATCA 1 cut(s) 918
FblI GTMKAC 2 cut(s) 227, 1536
FokI GGATG 4 cut(s) 95, 480, 567, 1493
FriOI GRGCYC 1 cut(s) 1240
FspBI CTAG 6 cut(s) 449, 1007, 1095, 1142, 1215, 1502
GlaI GCGC 4 cut(s) 76, 342, 498, 1434
GsaI CCCAGC 1 cut(s) 54
HaeIII GGCC 2 cut(s) 795, 1339
HapII CCGG 1 cut(s) 563
HhaI GCGC 4 cut(s) 77, 343, 499, 1435
Hin1II CATG 8 cut(s) 424, 603, 668, 775, 844, 1039, 1244, 1363
Hin6I GCGC 4 cut(s) 75, 341, 497, 1433
HinP1I GCGC 4 cut(s) 75, 341, 497, 1433
HincII GTYRAC 2 cut(s) 283, 1033
HindII GTYRAC 2 cut(s) 283, 1033
HinfI GANTC 3 cut(s) 137, 298, 1417
HpaII CCGG 1 cut(s) 563
HphI GGTGA 1 cut(s) 1289
Hpy166II GTNNAC 5 cut(s) 228, 283, 1033, 1321, 1537
Hpy188I TCNGA 7 cut(s) 12, 136, 297, 865, 1163, 1207, 1422
Hpy8I GTNNAC 5 cut(s) 228, 283, 1033, 1321, 1537
HpyAV CCTTC 5 cut(s) 7, 1116, 1420, 1420, 1451
HpyCH4III ACNGT 8 cut(s) 58, 232, 369, 416, 430, 1051, 1290, 1391
HpyCH4IV ACGT 1 cut(s) 1078
HpyCH4V TGCA 7 cut(s) 235, 272, 291, 605, 914, 1244, 1355
HpyF10VI GCNNNNNNNGC 5 cut(s) 36, 39, 568, 668, 1244
HpyF3I CTNAG 4 cut(s) 192, 1185, 1345, 1421
HpySE526I ACGT 1 cut(s) 1078
Hsp92II CATG 8 cut(s) 424, 603, 668, 775, 844, 1039, 1244, 1363
HspAI GCGC 4 cut(s) 75, 341, 497, 1433
KroI GCCGGC 1 cut(s) 562
KroNI GCCGGC 1 cut(s) 564
Ksp22I TGATCA 1 cut(s) 918
Kzo9I GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
LmnI GCTCC 4 cut(s) 406, 697, 969, 1143
LweI GCATC 2 cut(s) 649, 658
MabI ACCWGGT 2 cut(s) 66, 329
MaeI CTAG 6 cut(s) 449, 1007, 1095, 1142, 1215, 1502
MaeII ACGT 1 cut(s) 1078
MaeIII GTNAC 5 cut(s) 416, 767, 836, 892, 1079
MalI GATC 7 cut(s) 183, 627, 920, 1056, 1183, 1351, 1500
MboI GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 4 cut(s) 181, 625, 1181, 1349
MhlI GDGCHC 3 cut(s) 966, 1107, 1240
MlyI GAGTC 1 cut(s) 1426
MmeI TCCRAC 1 cut(s) 592
MroNI GCCGGC 1 cut(s) 562
MroXI GAANNNNTTC 2 cut(s) 1168, 1378
MseI TTAA 5 cut(s) 174, 348, 549, 699, 1259
MspA1I CMGCKG 1 cut(s) 1532
MspI CCGG 1 cut(s) 563
MspR9I CCNGG 3 cut(s) 68, 331, 1059
MunI CAATTG 1 cut(s) 500
Mva1269I GAATGC 2 cut(s) 83, 1516
MvaI CCWGG 3 cut(s) 68, 331, 1059
MvnI CGCG 1 cut(s) 341
MwoI GCNNNNNNNGC 5 cut(s) 36, 39, 568, 668, 1244
NaeI GCCGGC 1 cut(s) 564
NdeII GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
NgoMIV GCCGGC 1 cut(s) 562
NlaIII CATG 8 cut(s) 424, 603, 668, 775, 844, 1039, 1244, 1363
NlaIV GGNNCC 4 cut(s) 508, 693, 976, 1323
NspI RCATGY 2 cut(s) 603, 1039
PciI ACATGT 2 cut(s) 599, 1035
PcsI WCGNNNNNNNCGW 1 cut(s) 592
PctI GAATGC 2 cut(s) 83, 1516
PdiI GCCGGC 1 cut(s) 564
PdmI GAANNNNTTC 2 cut(s) 1168, 1378
PfeI GAWTC 2 cut(s) 137, 298
PleI GAGTC 1 cut(s) 1425
PpsI GAGTC 1 cut(s) 1425
PscI ACATGT 2 cut(s) 599, 1035
Psp124BI GAGCTC 1 cut(s) 1240
Psp6I CCWGG 3 cut(s) 66, 329, 1057
PspFI CCCAGC 1 cut(s) 50
PspGI CCWGG 3 cut(s) 66, 329, 1057
PspN4I GGNNCC 4 cut(s) 508, 693, 976, 1323
PspPI GGNCC 3 cut(s) 1321, 1337, 1438
PstI CTGCAG 2 cut(s) 274, 1357
PstNI CAGNNNCTG 2 cut(s) 330, 1352
PsuI RGATCY 4 cut(s) 181, 625, 1181, 1349
PvuII CAGCTG 1 cut(s) 1532
RsaI GTAC 6 cut(s) 65, 335, 371, 413, 598, 876
RsaNI GTAC 6 cut(s) 64, 334, 370, 412, 597, 875
SacI GAGCTC 1 cut(s) 1240
SaqAI TTAA 5 cut(s) 174, 348, 549, 699, 1259
Sau3AI GATC 7 cut(s) 181, 625, 918, 1054, 1181, 1349, 1498
Sau96I GGNCC 3 cut(s) 1321, 1337, 1438
SchI GAGTC 1 cut(s) 1426
ScrFI CCNGG 3 cut(s) 68, 331, 1059
SduI GDGCHC 3 cut(s) 966, 1107, 1240
SexAI ACCWGGT 2 cut(s) 66, 329
SfaNI GCATC 2 cut(s) 649, 658
SfcI CTRYAG 3 cut(s) 270, 426, 1353
SinI GGWCC 2 cut(s) 1321, 1438
SmlI CTYRAG 3 cut(s) 302, 728, 797
SmoI CTYRAG 3 cut(s) 302, 728, 797
SsiI CCGC 3 cut(s) 81, 485, 967
SspMI CTAG 6 cut(s) 449, 1007, 1095, 1142, 1215, 1502
SstI GAGCTC 1 cut(s) 1240
StyD4I CCNGG 3 cut(s) 66, 329, 1057
StyI CCWWGG 2 cut(s) 1094, 1150
TaaI ACNGT 8 cut(s) 58, 232, 369, 416, 430, 1051, 1290, 1391
TaiI ACGT 1 cut(s) 1081
TaqI TCGA 2 cut(s) 1219, 1413
TatI WGTACW 1 cut(s) 369
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 2 cut(s) 137, 298
Tru1I TTAA 5 cut(s) 174, 348, 549, 699, 1259
Tru9I TTAA 5 cut(s) 174, 348, 549, 699, 1259
TscAI CASTG 3 cut(s) 293, 945, 1054
TspDTI ATGAA 3 cut(s) 788, 1007, 1157
TspGWI ACGGA 1 cut(s) 584
TspRI CASTG 3 cut(s) 293, 945, 1054
VpaK11BI GGWCC 2 cut(s) 1321, 1438
XagI CCTNNNNNAGG 2 cut(s) 1098, 1344
XapI RAATTY 2 cut(s) 616, 1164
XbaI TCTAGA 1 cut(s) 448
XceI RCATGY 2 cut(s) 603, 1039
XmaJI CCTAGG 1 cut(s) 1094
XmiI GTMKAC 2 cut(s) 227, 1536
XmnI GAANNNNTTC 2 cut(s) 1168, 1378
XspI CTAG 6 cut(s) 449, 1007, 1095, 1142, 1215, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.